Reading a 3D image with a dimensionalty of 1 in dimension 3 (only one slice thick)
converts the image into a 2D image. But this causes the geometry to be corrupt.
The Matrix of the image is 2x2 so, not 3x3 as expected. The image wont be load.
The corresponding lines are 135, 136 and 144 in mitkImageFileReader.
As I commented 135 and 136 it worked just fine. But that wont be a fix anyway.