Occasionally the region grower will give a feedback contour that is outside of where the user specified the growing should start.
Description
Description
Event Timeline
Comment Actions
Smoothing of the region growing result can remove very thin bridges and disconnect regions. As of now the contour of one of those regions is displayed with no option to choose which one
Comment Actions
[70c2a3]: Merge branch 'bug-19580-region-grower-seed-point'
Merged commits:
2016-03-04 10:51:28 Jens Petersen [fc11cd]
Contour outside image error DEBUG not INFO
2016-03-02 17:22:46 Jens Petersen [89b534]
select correct region to extract contour from
Comment Actions
Jumping is corrected using ConnectedComponentImageFilter from ITK and then setting the contour value to the value of the region containing the seed point - 0.5. Unfortunately the contour being extracted can lie outside the image. The user won't notice, but the warning message was moved from MITK_INFO to MITK_DEBUG for release. Need to fix this, until then bug will remain open.
Comment Actions
The reason for the out-of-bounds contour creation lies in the iso contour value of 0.5. The latter causes the contour to be just outside of the image slice geometry for the upper indices, which is then also output in the warning message.
The issue can be fixed by setting a smaller iso contour value in the contour extraction filter, both in the OnMousePressedOutside and in the OnMouseMoved methods.
Comment Actions
Hi there! 🙂
This task was auto-closed according to our Task Lifecycle Management.
Please follow this link for more information and don't forget that you are encouraged to reasonable re-open tasks to revive them. 🚑
Best wishes,
The MITK devs