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Maniphest T30321

Upgrade dependencies to be compatible with Ubuntu 23.10+
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Description

Several dependencies do not compile on Ubuntu 23.10. We should upgrade these dependencies which will typically resolve the issues.

  • OpenCV
  • VTK
  • PCRE (not really necessary but at least we need to adapt the prerequisites: sudo apt install automake autoconf m4 perl
  • BlueBerry: Replace the variable name concept since it collides with the C++20 concept keyword
  • There's also an upgrade for DCMQI which we should do in one run (https://github.com/MITK/MITK/pull/279)

Revisions and Commits

rMITK MITK
Restricted Differential RevisionrMITK578a4479d8d6 Upgrade HDF5 from v1.8.17 to v1.14.3
Restricted Differential RevisionrMITK4c75e429095d Upgrade HDF5 from v1.8.17 to v1.14.3
Restricted Differential RevisionrMITKcda448c316bf Upgrade OpenCV from v4.6 to v4.9
Restricted Differential RevisionrMITK7105641c4280 Upgrade VTK from v9.2.6 to v9.3
Restricted Differential RevisionrMITK5c29fc89eb01 Replace concept variable name (collision with C++20 keyword)
Restricted Differential RevisionrMITK0ce9c84b943b Upgrade PCRE from v8.35 to v8.45
Restricted Differential RevisionrMITK8444eeeaf9be Merge remote-tracking branch 'origin/bugfix/T30321-Ubuntu_23.10_Compatibility'…

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Event Timeline

kislinsk triaged this task as Normal priority.Feb 7 2024, 2:47 PM
kislinsk created this task.
kislinsk added a comment.Feb 7 2024, 3:05 PM

Pushed new branch to rMITK MITK: bugfix/T30321-Ubuntu_23.10_Compatibility.

kislinsk merged a task: T30286: Update to DCMQI 1.3.1.Feb 7 2024, 3:06 PM
kislinsk added a subscriber: floca.
kislinsk updated the task description. (Show Details)Feb 7 2024, 3:27 PM
kislinsk updated the task description. (Show Details)Feb 8 2024, 3:29 PM
kislinsk updated the task description. (Show Details)
kislinsk added a revision: Restricted Differential Revision.Feb 8 2024, 3:34 PM
kislinsk removed a project: Pull Request.Feb 8 2024, 5:51 PM
kislinsk added a commit: rMITK8444eeeaf9be: Merge remote-tracking branch 'origin/bugfix/T30321-Ubuntu_23.10_Compatibility'….Feb 8 2024, 6:49 PM
kislinsk added a commit: rMITK5c29fc89eb01: Replace concept variable name (collision with C++20 keyword).
kislinsk added a commit: rMITK0ce9c84b943b: Upgrade PCRE from v8.35 to v8.45.
kislinsk closed this task as Resolved.Feb 8 2024, 6:49 PM
kislinsk added a commit: rMITK7105641c4280: Upgrade VTK from v9.2.6 to v9.3.Feb 8 2024, 6:49 PM
kislinsk added a commit: rMITKcda448c316bf: Upgrade OpenCV from v4.6 to v4.9.
kislinsk reopened this task as Open.Feb 10 2024, 11:56 PM

VTK 9.3 has a build issue in debug mode with Visual Studio. It's a known issue but it is not yet fixed upstream.

kislinsk added a comment.Feb 10 2024, 11:57 PM

Pushed new branch to rMITK MITK: bugfix/T30321-FixVTK.

kislinsk added a comment.Feb 10 2024, 11:58 PM

Deleted branch from rMITK MITK: bugfix/T30321-FixVTK.

kislinsk closed this task as Resolved.Feb 10 2024, 11:58 PM
kislinsk mentioned this in rMITK95388e2befba: Merge branch 'bugfix/T30321-FixVTK' into develop.Feb 10 2024, 11:58 PM
kislinsk reopened this task as Open.Feb 20 2024, 10:53 AM

I don't understand why it didn't show up earlier, but now also HDF5 does not compile on Ubuntu 23.10 and needs an upgrade. Might be a bit more involved, as we are using a rather old version and there have been quite some API changes meanwhile.

kislinsk added a comment.Feb 20 2024, 10:55 AM

Pushed new branch to rMITK MITK: bugfix/T30321-UpgradeHDF5.

kislinsk added a revision: Restricted Differential Revision.Feb 20 2024, 2:42 PM
kislinsk closed this task as Resolved by committing rMITK4c75e429095d: Upgrade HDF5 from v1.8.17 to v1.14.3.Feb 20 2024, 5:46 PM
kislinsk added a commit: rMITK4c75e429095d: Upgrade HDF5 from v1.8.17 to v1.14.3.
kislinsk added a commit: rMITK578a4479d8d6: Upgrade HDF5 from v1.8.17 to v1.14.3.
kislinsk added a comment.Feb 20 2024, 5:46 PM

Deleted branch from rMITK MITK: bugfix/T30321-UpgradeHDF5.

kislinsk mentioned this in T30367: 2024 Week 11 (Mid March).Mar 11 2024, 11:27 AM
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