Withing MITKFlowbench there is a variable to define the Output Dir:
--flow.output ...
The name of the Outputfile is the name of the Segmentation file.
And there is the Problem:
When selecting a "normal" Name e.g. "segmentation" on "Accept segmentation" the file is correctly stored.
When selecting a name with e.g. spaces (default suggested segmentation name), MITK tries to store the file for example here:
Writing image: D:\Projekte\MITK_dev\bin\MITK-build\bin\Private^000001_BPL_Abdomen_Winfried (Adult) \ Abdomen BPL 5.0 B40f-labels.dcm
And Now the GUI just tells me "Segmentation stored!" but there is no segmentation in the folder. The reason should be the naming of the file...