- User Since
- Sep 3 2018, 11:01 AM (107 w, 6 d)
Mon, Sep 14
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Mon, Aug 31
Is this the correct module? https://docs.mitk.org/2018.04/org_mitk_views_cmdlinemodules.html ? Or is there another command line tool?
Aug 25 2020
Aug 6 2020
Aug 5 2020
Jul 14 2020
Jul 1 2020
Jun 8 2020
@gaoh: Can you tell what you mean by dynamic mask?
May 15 2020
File is correctly saved in the current master.
then build package target in MITK build.
@kislinsk what do you mean with this? Is it just the "normal" process, aka cmake and make in MITK-build. Or do I have to configure something additionally?
I tried the normal way and got also the "normal structure": with a bin, lib, Modules etc folder. Whereas when I download the release 18.04, the libraries are directly packed into the bin folder?
May 11 2020
If the "base", the image, is in dcm, and not a nrrd file (which is the case in dcipher, when pulling the images from the PAC), the Segmentation can be saved as DICOM. The created file can be saved in a mounted folder and can then be directly imported via airflow into the pacs.
Directly sending data from MITK to the PACs is not recommended, because otherwise the metadata is not extracted and the segemtation cannot be triggered via kibana!
I reproduced it with the "Installer".
[63.469] Writing image: /home/hanno/mitk/seg.dcm
Input image size: [512, 512, 7]
CodeSequence Exception: missing value in code sequence
#63.470# ERROR: An error occurred during writing the DICOM Seg: JSON Exception: file could not be read.
May 8 2020
I just tested it, it works!
May 5 2020
Apr 8 2020
Mar 4 2020
The current way in the dicomweb-plugin is for GET, is to use with IHE (Invoke Image Display style).
The data is downloaded in a local temp folder (via SendWADO). And the data is then imported to the datanode via mitk::IOUtil::Load()
So basically, apart from listening to incoming IHE GET requests, it is only a DicomWeb client.
But this could be nice, to use MITK also a DicomWeb server. This Rest API could be used to build a wrapper around.
Also, it could be nice in the current implementation of loading the data to use this.
Mar 2 2020
Feb 21 2020
Jan 9 2020
This issue is not wDB related, but MITK related:
Query with CGET activated and then Retrieve:
Retrieve does not work, MTIK directly shows:
Jan 8 2020
Still valid, but still part of the checklist!
Still not working, but still part of the checklist!
This does still not work (Retrieve from wdB fails, when going throw the "Checkliste DICOM Browser".
I have to look into this.
still not working, but it is part of the checklist "ViewNavigator"
Dec 9 2019
A two step build also works:
Dec 3 2019
Mar 15 2019
The log entries don't tell me a lot, basically I thing for every file it writes: ERROR: setting value to 0
Just in the end, before the termination the log entries change to:
Feb 15 2019
Point 1 and 2 are working.
With point 3: not all the series are downloaded: I retrieved all 5 series of a patient, but only got 2 series. Separately retrieving of each series was fine.
Feb 13 2019
yes I will try, I already tried Q/R with the current installer and the wdb and it worked.
Jan 3 2019
Oct 22 2018
@hentsch I get build errors with the current master (in ubuntu), without your commit everything is fine.
Do I have to change something with cmake flags?
The last lines before failure:
/home/hanno/myDocker/Matchpoint/src/Code/Algorithms/ITK/boxed/mapITKRigid3DMattesMIHeadNeckRegistrationAlgorithmTemplate.tpp:128:25: error: ‘zSize’ was not declared in this scope
region.SetIndex(2, zSize / 3); ^~~~~
/home/hanno/myDocker/Matchpoint/src/Code/Algorithms/ITK/boxed/mapITKRigid3DMattesMIHeadNeckRegistrationAlgorithmTemplate.tpp:139:11: error: ‘spInitializer’ was not declared in this scope
/home/hanno/myDocker/Matchpoint/src/Code/Algorithms/ITK/boxed/mapITKRigid3DMattesMIHeadNeckRegistrationAlgorithmTemplate.tpp:139:11: note: suggested alternative: ‘InitializerType’
spInitializer->SetMovingImage(this->getInternalMovingImage()); ^~~~~~~~~~~~~ InitializerType
[77/125] Building CXX object Code/IO/C...dir/source/mapGenericImageReader.cpp.o
ninja: build stopped: subcommand failed.
Oct 9 2018
Oct 8 2018
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Sep 24 2018
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Sep 19 2018
Pushed new branch T24156-ImageNavigatorVisibilityTimeSlider.