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gaoh (Hanno Gao)
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Projects (6)

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User Since
Sep 3 2018, 11:01 AM (107 w, 6 d)

Recent Activity

Mon, Sep 14

gaoh added a member for SIDT: m139l.
Mon, Sep 14, 4:40 PM
gaoh closed T27110: [MITKDoc] Revise Command Line Tool/ Automatisation Plugin Documentation as Resolved.
Mon, Sep 14, 3:32 PM · Cleared, MITK (2020)
gaoh committed rMITKc4b6bb115cd1: T27110 Revice Command Line Tool. (authored by gaoh).
T27110 Revice Command Line Tool.
Mon, Sep 14, 3:28 PM
gaoh committed rMITK032e29703e98: T27110 Revice Command Line Tool: (authored by gaoh).
T27110 Revice Command Line Tool:
Mon, Sep 14, 3:28 PM
gaoh committed rMITK0fdef86d49b2: update plugin name cmdlinemodules (authored by gaoh).
update plugin name cmdlinemodules
Mon, Sep 14, 3:28 PM
gaoh committed rMITKe22741af90b4: Merge branch 'develop' into feature/T27110ReviseCommandLineTool (authored by gaoh).
Merge branch 'develop' into feature/T27110ReviseCommandLineTool
Mon, Sep 14, 3:28 PM
gaoh committed rMITKcb64d430b5fa: Merge branch 'develop' into feature/T27110ReviseCommandLineTool (authored by gaoh).
Merge branch 'develop' into feature/T27110ReviseCommandLineTool
Mon, Sep 14, 3:28 PM
gaoh committed rMITKc91fd01c42af: updated image statistics documentation. (authored by gaoh).
updated image statistics documentation.
Mon, Sep 14, 3:28 PM
gaoh added a member for Kaapana (internal): m139l.
Mon, Sep 14, 1:10 PM

Thu, Sep 3

gaoh closed T27683: Dockerized MITK ubuntu 18.04 on current Master rMITKf0e722f6a65d3aba98d674120683260564ce8db0 as Resolved.
Thu, Sep 3, 2:09 PM · MITK
gaoh closed T27101: [MITKDoc] Revise Logging Plugin Documentation as Resolved.
Thu, Sep 3, 12:48 PM · Cleared, MITK (2020)
gaoh committed rMITK6564d6922115: Revise Logging Plugin Documentation (authored by gaoh).
Revise Logging Plugin Documentation
Thu, Sep 3, 12:46 PM
gaoh committed rMITKd306ce97c808: Merge branch 'develop' of https://phabricator.mitk.org/source/mitk into develop (authored by gaoh).
Merge branch 'develop' of https://phabricator.mitk.org/source/mitk into develop
Thu, Sep 3, 12:46 PM
gaoh committed rMITKa7b1d2d96181: Merge Revise Logging Plugin Documentation of https://phabricator.mitk. (authored by gaoh).
Merge Revise Logging Plugin Documentation of https://phabricator.mitk.
Thu, Sep 3, 12:46 PM
gaoh committed rMITK2e2c276e7534: applied review comments (authored by gaoh).
applied review comments
Thu, Sep 3, 12:46 PM
gaoh committed rMITK5a6a54a73544: Revise Logging Plugin Documentation (authored by gaoh).
Revise Logging Plugin Documentation
Thu, Sep 3, 12:46 PM
gaoh closed T27097: [MITKDoc] Revise Statistics Plugin Documentation as Resolved.
Thu, Sep 3, 12:18 PM · Cleared, MITK (2020)
gaoh committed rMITK40190a2ba6f6: Changed Documentation for Image Statitics: T27097 (authored by gaoh).
Changed Documentation for Image Statitics: T27097
Thu, Sep 3, 12:16 PM
gaoh committed rMITK742ea8951545: removed wrong image (authored by gaoh).
removed wrong image
Thu, Sep 3, 12:16 PM
gaoh committed rMITKf172a50c61ea: update image statistics plugin. (authored by gaoh).
update image statistics plugin.
Thu, Sep 3, 12:16 PM
gaoh committed rMITKadb072ea0dfe: addid additonal subsections (authored by gaoh).
addid additonal subsections
Thu, Sep 3, 12:16 PM
gaoh committed rMITKbbfeae7e7d7f: Merge branch 'develop' of ssh://phabricator.mitk.org:2222/source/mitk into… (authored by gaoh).
Merge branch 'develop' of ssh://phabricator.mitk.org:2222/source/mitk into…
Thu, Sep 3, 12:16 PM
gaoh committed rMITK2acff4f1a6f6: Changed Documentation for Image Statitics: T27097 (authored by gaoh).
Changed Documentation for Image Statitics: T27097
Thu, Sep 3, 12:16 PM

Mon, Aug 31

gaoh added a comment to T27669: Dicom import issue with MITK binaries (package) and Ubuntu.

I have checked it with the current develop head under linux (Ubuntu 18) as well. I cannot reproduce the descibed error. Everything is loaded into one volume.

@gaoh May it is an outdated MITK container?

Mon, Aug 31, 4:28 PM · Missing Info, DICOM, MITK
gaoh added a comment to T27110: [MITKDoc] Revise Command Line Tool/ Automatisation Plugin Documentation.

Is this the correct module? https://docs.mitk.org/2018.04/org_mitk_views_cmdlinemodules.html ? Or is there another command line tool?

Mon, Aug 31, 2:17 PM · Cleared, MITK (2020)
gaoh claimed T27110: [MITKDoc] Revise Command Line Tool/ Automatisation Plugin Documentation.
Mon, Aug 31, 1:28 PM · Cleared, MITK (2020)
gaoh added a revision to T27097: [MITKDoc] Revise Statistics Plugin Documentation: Unknown Object (Differential Revision).
Mon, Aug 31, 1:28 PM · Cleared, MITK (2020)
gaoh claimed T27097: [MITKDoc] Revise Statistics Plugin Documentation.
Mon, Aug 31, 1:20 PM · Cleared, MITK (2020)

Aug 25 2020

gaoh created T27683: Dockerized MITK ubuntu 18.04 on current Master rMITKf0e722f6a65d3aba98d674120683260564ce8db0.
Aug 25 2020, 3:41 PM · MITK

Aug 6 2020

gaoh claimed T27101: [MITKDoc] Revise Logging Plugin Documentation.
Aug 6 2020, 11:49 AM · Cleared, MITK (2020)

Aug 5 2020

gaoh added a member for SIDT: s669m.
Aug 5 2020, 10:22 AM
gaoh added a member for Kaapana (internal): s669m.
Aug 5 2020, 10:21 AM

Jul 14 2020

gaoh triaged T27559: Crash when changing parent data nodes in Data Manager as Normal priority.
Jul 14 2020, 11:33 AM · Cleared, MITK (2020)

Jul 1 2020

gaoh added a member for SIDT: e249r.
Jul 1 2020, 1:36 PM

Jun 8 2020

gaoh added a comment to T26974: [Segmentation] Region Growing 3D with 4D dataset not working.

@gaoh: Can you tell what you mean by dynamic mask?

Jun 8 2020, 2:55 PM · MITK (2020)

May 15 2020

gaoh closed T27181: MITK - DICOM Seg - not saved when started without terminal as Resolved.

File is correctly saved in the current master.

May 15 2020, 11:27 AM · Cleared, MITK (2020)
gaoh added a comment to T27181: MITK - DICOM Seg - not saved when started without terminal.

then build package target in MITK build.

@kislinsk what do you mean with this? Is it just the "normal" process, aka cmake and make in MITK-build. Or do I have to configure something additionally?
I tried the normal way and got also the "normal structure": with a bin, lib, Modules etc folder. Whereas when I download the release 18.04, the libraries are directly packed into the bin folder?

May 15 2020, 10:00 AM · Cleared, MITK (2020)

May 11 2020

gaoh added a project to T26953: DICOM SEG - Cannot rewrite segmentations as DICOM SEG: Cleared.
May 11 2020, 12:44 PM · MITK, Next Milestone, Cleared
gaoh closed T27369: [Dcipher] Possibility to save Dicom segmentation objects instead of .nrrd and send those ideally directly to the platform as Resolved.

If the "base", the image, is in dcm, and not a nrrd file (which is the case in dcipher, when pulling the images from the PAC), the Segmentation can be saved as DICOM. The created file can be saved in a mounted folder and can then be directly imported via airflow into the pacs.
Directly sending data from MITK to the PACs is not recommended, because otherwise the metadata is not extracted and the segemtation cannot be triggered via kibana!

May 11 2020, 12:37 PM · MITK (2020)
gaoh updated subscribers of T27181: MITK - DICOM Seg - not saved when started without terminal.

I reproduced it with the "Installer".

[63.469] Writing image: /home/hanno/mitk/seg.dcm
Input image size: [512, 512, 7]
CodeSequence Exception: missing value in code sequence
#63.470# ERROR: An error occurred during writing the DICOM Seg: JSON Exception: file could not be read.

May 11 2020, 12:29 PM · Cleared, MITK (2020)

May 8 2020

gaoh closed T27176: MITK - DICOM Seg - load created files as Resolved.

I just tested it, it works!

May 8 2020, 11:46 AM · Missing Info, MITK (2020)

May 5 2020

gaoh removed a member for wDB: hentsch.
May 5 2020, 3:54 PM
gaoh added a member for wDB: kislinsk.
May 5 2020, 3:52 PM

Apr 8 2020

gaoh edited projects for T27176: MITK - DICOM Seg - load created files, added: MITK (2020); removed MITK.
Apr 8 2020, 10:43 AM · Missing Info, MITK (2020)

Mar 4 2020

gaoh added a comment to T27189: REST API for data storage.

The current way in the dicomweb-plugin is for GET, is to use with IHE (Invoke Image Display style).
The data is downloaded in a local temp folder (via SendWADO). And the data is then imported to the datanode via mitk::IOUtil::Load()
So basically, apart from listening to incoming IHE GET requests, it is only a DicomWeb client.
But this could be nice, to use MITK also a DicomWeb server. This Rest API could be used to build a wrapper around.
Also, it could be nice in the current implementation of loading the data to use this.

Mar 4 2020, 1:21 PM · Restricted Project, Request for Discussion, MITK

Mar 2 2020

gaoh created T27176: MITK - DICOM Seg - load created files.
Mar 2 2020, 3:24 PM · Missing Info, MITK (2020)

Feb 21 2020

gaoh committed rMITKcc90bc7e407e: update gui (authored by gaoh).
update gui
Feb 21 2020, 12:42 PM
gaoh committed rMITKed7dec720306: Removed unused Put (authored by gaoh).
Removed unused Put
Feb 21 2020, 12:42 PM
gaoh committed rMITKff5802cd361a: Update and cleanup (authored by gaoh).
Update and cleanup
Feb 21 2020, 12:42 PM
gaoh committed rMITKd6fd9672c748: corrected (authored by gaoh).
corrected
Feb 21 2020, 12:42 PM
gaoh committed rMITKf35618922a53: clean up some elements (authored by gaoh).
clean up some elements
Feb 21 2020, 12:42 PM
gaoh committed rMITK4a36b4dbce07: 'Merge' SegmentationReworkPlugin from T25025-Segmentation-Rework-MITK-Plugin (authored by gaoh).
'Merge' SegmentationReworkPlugin from T25025-Segmentation-Rework-MITK-Plugin
Feb 21 2020, 12:42 PM

Jan 9 2020

gaoh placed T24398: Dicom plugin: wdb Retrieve does not work up for grabs.

This issue is not wDB related, but MITK related:
Query with CGET activated and then Retrieve:
Retrieve does not work, MTIK directly shows:

Jan 9 2020, 10:05 AM · MITK

Jan 8 2020

gaoh triaged T26975: 2D Fast Marching for 4D data intermediate state displays segmentation in other timesteps as Normal priority.
Jan 8 2020, 5:42 PM · Missing Info, MITK (2020)
gaoh added a project to T22395: Live wire tool deactivate leads to confirm segmentation: Restricted Project.

Still valid, but still part of the checklist!

Jan 8 2020, 5:25 PM · MITK, Restricted Project
gaoh added a project to T22391: Correction tool doesn't work in empty slice: Restricted Project.

Still not working, but still part of the checklist!

Jan 8 2020, 5:03 PM · MITK, Restricted Project
gaoh triaged T26974: [Segmentation] Region Growing 3D with 4D dataset not working as Normal priority.
Jan 8 2020, 3:51 PM · MITK (2020)
gaoh reopened T24398: Dicom plugin: wdb Retrieve does not work as "Open".

This does still not work (Retrieve from wdB fails, when going throw the "Checkliste DICOM Browser".
I have to look into this.

Jan 8 2020, 11:45 AM · MITK
gaoh triaged T26963: Dicom Browser progressbar not showing as Low priority.
Jan 8 2020, 10:51 AM · MITK, Restricted Project
gaoh added a project to T18866: Highlighting in View Navigator is not updated: Restricted Project.

still not working, but it is part of the checklist "ViewNavigator"

Jan 8 2020, 10:15 AM · MITK, Restricted Project, Bugzilla

Dec 9 2019

gaoh added a comment to T26897: Build error: Could not find git for clone of qRestAPI.

A two step build also works:

Dec 9 2019, 4:52 PM · MITK

Dec 3 2019

gaoh renamed T26885: Open NBIA Dataset - linux mitk workbench- crashes from Open NBIA Dataset with in the linux mitk workbench- crashes to Open NBIA Dataset - linux mitk workbench- crashes.
Dec 3 2019, 2:33 PM · MITK
gaoh triaged T26885: Open NBIA Dataset - linux mitk workbench- crashes as Low priority.
Dec 3 2019, 2:32 PM · MITK

Mar 15 2019

gaoh added a comment to T19999: DICOM CGet and CMove don't work correctly.

The log entries don't tell me a lot, basically I thing for every file it writes: ERROR: setting value to 0
Just in the end, before the termination the log entries change to:

Mar 15 2019, 12:30 PM · Restricted Project, Restricted Project, MITK

Feb 15 2019

gaoh added a comment to T19999: DICOM CGet and CMove don't work correctly.

Point 1 and 2 are working.
With point 3: not all the series are downloaded: I retrieved all 5 series of a patient, but only got 2 series. Separately retrieving of each series was fine.

Feb 15 2019, 12:18 PM · Unknown Object (Project), Restricted Project, MITK

Feb 13 2019

gaoh added a comment to T19999: DICOM CGet and CMove don't work correctly.

yes I will try, I already tried Q/R with the current installer and the wdb and it worked.

Feb 13 2019, 5:52 PM · Unknown Object (Project), Restricted Project, MITK

Jan 3 2019

gaoh added a member for SIDT: rasheed.
Jan 3 2019, 5:02 PM

Oct 22 2018

gaoh added a comment to rMPb391c8f57e95: Merge branch 'T25506-portRAP'.

@hentsch I get build errors with the current master (in ubuntu), without your commit everything is fine.
Do I have to change something with cmake flags?
The last lines before failure:
/home/hanno/myDocker/Matchpoint/src/Code/Algorithms/ITK/boxed/mapITKRigid3DMattesMIHeadNeckRegistrationAlgorithmTemplate.tpp:128:25: error: ‘zSize’ was not declared in this scope

region.SetIndex(2, zSize / 3);
                   ^~~~~

/home/hanno/myDocker/Matchpoint/src/Code/Algorithms/ITK/boxed/mapITKRigid3DMattesMIHeadNeckRegistrationAlgorithmTemplate.tpp:139:11: error: ‘spInitializer’ was not declared in this scope

spInitializer->SetMovingImage(this->getInternalMovingImage());
^~~~~~~~~~~~~

/home/hanno/myDocker/Matchpoint/src/Code/Algorithms/ITK/boxed/mapITKRigid3DMattesMIHeadNeckRegistrationAlgorithmTemplate.tpp:139:11: note: suggested alternative: ‘InitializerType’

spInitializer->SetMovingImage(this->getInternalMovingImage());
^~~~~~~~~~~~~
InitializerType

[77/125] Building CXX object Code/IO/C...dir/source/mapGenericImageReader.cpp.o
ninja: build stopped: subcommand failed.

Oct 22 2018, 11:35 AM

Oct 9 2018

gaoh committed rMITKaba66c19e815: Merge branch 'T23543-WriteTestsForMitkChart' (authored by gaoh).
Merge branch 'T23543-WriteTestsForMitkChart'
Oct 9 2018, 4:55 PM
gaoh committed rMITKa1e15186232f: remove tests: o Under linux: gcc result in errors, caused probably by… (authored by gaoh).
remove tests: o Under linux: gcc result in errors, caused probably by…
Oct 9 2018, 4:43 PM

Oct 8 2018

gaoh committed rMITK306e9ae942be: Merge branch 'T23543-WriteTestsForMitkChart' (authored by gaoh).
Merge branch 'T23543-WriteTestsForMitkChart'
Oct 8 2018, 2:11 PM
gaoh committed rMITK9b01eac126f5: remove creation of WebEngineView for UnitTests: Try to remove Test error… (authored by gaoh).
remove creation of WebEngineView for UnitTests: Try to remove Test error…
Oct 8 2018, 2:09 PM

Oct 5 2018

gaoh committed rMITKc4bfeded8e8a: Merge branch 'T23543-WriteTestsForMitkChart' (authored by gaoh).
Merge branch 'T23543-WriteTestsForMitkChart'
Oct 5 2018, 2:05 PM
gaoh committed rMITK1211cf438d40: remove all calls to WebEngineView for UnitTests: Try to remove Test error on… (authored by gaoh).
remove all calls to WebEngineView for UnitTests: Try to remove Test error on…
Oct 5 2018, 2:02 PM

Oct 4 2018

gaoh committed rMITKa8c0c7329bd1: Merge branch 'T23543-WriteTestsForMitkChart' removed warning: unused variable (authored by gaoh).
Merge branch 'T23543-WriteTestsForMitkChart' removed warning: unused variable
Oct 4 2018, 1:02 PM
gaoh committed rMITKdf3e9a3dc7ee: removed warning of unused variable (authored by gaoh).
removed warning of unused variable
Oct 4 2018, 1:00 PM

Oct 2 2018

gaoh committed rMITKb5cdb8e9dff3: Merge branch 'T23543-WriteTestsForMitkChart' fixed error in ggc (authored by gaoh).
Merge branch 'T23543-WriteTestsForMitkChart' fixed error in ggc
Oct 2 2018, 3:40 PM
gaoh committed rMITK9f6cd0ecf36a: fixed linux gcc errors (authored by gaoh).
fixed linux gcc errors
Oct 2 2018, 3:28 PM

Sep 24 2018

gaoh committed rMITKa8ac4144bc4a: Merge branch 'T23543-WriteTestsForMitkChart' (authored by gaoh).
Merge branch 'T23543-WriteTestsForMitkChart'
Sep 24 2018, 9:09 AM

Sep 21 2018

gaoh committed rMITK4880f18a98db: UnitTests in Release Mode: QWebEngineView throws an access violation exception (authored by gaoh).
UnitTests in Release Mode: QWebEngineView throws an access violation exception
Sep 21 2018, 4:42 PM
gaoh committed rMITK4049a6933036: use QApplication instead of qapplication for linux gcc (authored by gaoh).
use QApplication instead of qapplication for linux gcc
Sep 21 2018, 8:28 AM
gaoh committed rMITK89d9df2ef68f: use QApplication instead of qapplication for linux gcc (authored by gaoh).
use QApplication instead of qapplication for linux gcc
Sep 21 2018, 8:26 AM
gaoh committed rMITKfcbdfaeaf710: use QApplication instead of qapplication for linux gcc (authored by gaoh).
use QApplication instead of qapplication for linux gcc
Sep 21 2018, 8:20 AM

Sep 20 2018

gaoh committed rMITK5b44ac268c8e: refactored (more compact version) (authored by gaoh).
refactored (more compact version)
Sep 20 2018, 8:28 AM

Sep 19 2018

gaoh closed T24156: Image Navigator: don't display time slider for data sets without time as Resolved.
Sep 19 2018, 4:54 PM · Restricted Project, MITK
gaoh committed rMITK6daf0760cf4d: Set time slider to invisible, if the timeGeometry has ony 1 TimeStep (e.g. 3D… (authored by gaoh).
Set time slider to invisible, if the timeGeometry has ony 1 TimeStep (e.g. 3D…
Sep 19 2018, 4:46 PM
gaoh added a comment to T24156: Image Navigator: don't display time slider for data sets without time.

Pushed new branch T24156-ImageNavigatorVisibilityTimeSlider.

Sep 19 2018, 4:46 PM · Restricted Project, MITK
gaoh claimed T24156: Image Navigator: don't display time slider for data sets without time.
Sep 19 2018, 4:26 PM · Restricted Project, MITK

Sep 18 2018

gaoh committed rMITK8a521d395ca6: Merge branch 'T23543-WriteTestsForMitkChart' (authored by gaoh).
Merge branch 'T23543-WriteTestsForMitkChart'
Sep 18 2018, 11:48 AM
gaoh committed rMITK4ff968548ee5: added test AddAndRemoveData (authored by gaoh).
added test AddAndRemoveData
Sep 18 2018, 11:39 AM
gaoh committed rMITKe29f9b491445: refactor (authored by gaoh).
refactor
Sep 18 2018, 11:39 AM
gaoh committed rMITK46ea95a855ac: updated and added tests for mitkChartWidget (authored by gaoh).
updated and added tests for mitkChartWidget
Sep 18 2018, 11:39 AM
gaoh committed rMITK176a8172e2f2: Merge branch 'T23543-WriteTestsForMitkChart' into T23543… (authored by gaoh).
Merge branch 'T23543-WriteTestsForMitkChart' into T23543…
Sep 18 2018, 11:39 AM

Sep 7 2018

gaoh raised the priority of T25416: How to create a new MITK Plugin - start confusing from Low to Needs Triage.
Sep 7 2018, 10:35 AM · MITK
gaoh triaged T25416: How to create a new MITK Plugin - start confusing as Low priority.
Sep 7 2018, 9:59 AM · MITK