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Wed, Jan 11

neher committed rMITKDIFF170241e09dd8: Merge branch 'T29441-RemoveTractometry' (authored by neher).
Merge branch 'T29441-RemoveTractometry'
Wed, Jan 11, 3:11 PM
neher committed rMITKDIFF4790cc2ec87c: Remove all tractometry components (authored by neher).
Remove all tractometry components
Wed, Jan 11, 3:11 PM
neher triaged T29441: Remove tractometry as Wishlist priority.
Wed, Jan 11, 3:08 PM · MITK Diffusion
neher committed rMITKDIFF1485fc2f4b12: radtract screenshots etc (authored by neher).
radtract screenshots etc
Wed, Jan 11, 3:02 PM
neher committed rMITKDIFF311df5b8ccce: Merge branch 'T29430-FlipXtrk' (authored by neher).
Merge branch 'T29430-FlipXtrk'
Wed, Jan 11, 2:59 PM
neher committed rMITKDIFF2f6bf1b5fc85: Making RAS default. Flip x on load is not default (authored by neher).
Making RAS default. Flip x on load is not default
Wed, Jan 11, 2:58 PM

Dec 8 2022

neher committed rMITKDIFF2a04e0a17393: make flip x default for trk files (authored by neher).
make flip x default for trk files
Dec 8 2022, 4:40 PM
neher triaged T29430: Flip x direction for trk files as Normal priority.
Dec 8 2022, 1:26 PM · MITK Diffusion

Nov 24 2022

neher triaged T29417: Segmentation view crashes on loading binary image as Normal priority.
Nov 24 2022, 12:01 PM · MITK
neher added a comment to T29416: Segmentation utilities can only handle unsigned char and unsigned short, no other types.

Example data

Nov 24 2022, 11:57 AM · Missing Info, MITK (v2023.04)

Nov 22 2022

neher triaged T29416: Segmentation utilities can only handle unsigned char and unsigned short, no other types as Normal priority.
Nov 22 2022, 2:57 PM · Missing Info, MITK (v2023.04)

Nov 17 2022

neher triaged T29396: [Segmentation] Newly created labelset image has wrong image type as Normal priority.
Nov 17 2022, 9:42 AM · MITK (v2023.04)

Nov 14 2022

neher closed T29323: Fix windows dcl as Resolved.
Nov 14 2022, 11:05 AM · MITK Diffusion

Nov 9 2022

neher committed rMITKDIFFd1afc9dc572a: Update build configurations to use opencv (authored by neher).
Update build configurations to use opencv
Nov 9 2022, 2:26 PM
neher committed rMITKDIFF66d50f918b54: Merge branch 'T29356-Infibtion' into T29356-InfibtionToMaster (authored by neher).
Merge branch 'T29356-Infibtion' into T29356-InfibtionToMaster
Nov 9 2022, 1:11 PM
neher placed T26413: Nifti2 support up for grabs.
Nov 9 2022, 11:38 AM · Missing Info, MITK
neher added a comment to T26413: Nifti2 support.

Unfortunately not solved. Same error.

Nov 9 2022, 11:37 AM · Missing Info, MITK
neher closed T26124: Add new systematic fiberfox tests as Wontfix.
Nov 9 2022, 11:36 AM · MITK Diffusion
neher closed T29262: Write / expand paragraph in methods section regarding nnU-Net and radiomics analysis as Resolved.
Nov 9 2022, 10:53 AM
neher closed T25501: Implement 3D visualization of parcellation images as Wontfix.
Nov 9 2022, 10:52 AM · MITK Diffusion
neher closed T27342: Implement gyral-shape fiber ending in fiberfox as Wontfix.
Nov 9 2022, 10:52 AM · MITK Diffusion
neher closed T25001: Add proton density maps as Wontfix.
Nov 9 2022, 10:52 AM · MITK Diffusion
neher closed T26061: Implement 3D sequences as Wontfix.
Nov 9 2022, 10:52 AM · MITK Diffusion
neher closed T26281: Simulation without fibers, only VFMs as Wontfix.
Nov 9 2022, 10:51 AM · MITK Diffusion
neher closed T26062: Implement parallel imaging as Wontfix.
Nov 9 2022, 10:51 AM · MITK Diffusion
neher closed T25567: Data quality analysis as Wontfix.
Nov 9 2022, 10:51 AM · MITK Diffusion
neher closed T26180: Implement readout gradient dephasing as Wontfix.
Nov 9 2022, 10:51 AM · MITK Diffusion
neher committed rMITKDIFF6075f50866a7: Merge branch 'T29323-FixWindows' (authored by neher).
Merge branch 'T29323-FixWindows'
Nov 9 2022, 10:36 AM
neher committed rMITKDIFFa5a33d3b857b: random_shuffle --> shuffle (authored by neher).
random_shuffle --> shuffle
Nov 9 2022, 10:35 AM
neher committed rMITKDIFF0123d5c4c45a: Merge branch 'T29323-FixWindows' (authored by neher).
Merge branch 'T29323-FixWindows'
Nov 9 2022, 10:19 AM
neher committed rMITKDIFFbac9fa937a24: Remve itk pointshell export macro (authored by neher).
Remve itk pointshell export macro
Nov 9 2022, 10:18 AM

Oct 6 2022

neher closed T29321: Diffusion dicom reader not checling for vendor "Siemens Healthineers" as Resolved.
Oct 6 2022, 2:39 PM · MITK Diffusion
neher committed rMITKDIFF91bdab0b79cc: Merge branch 'T29323-RandomShuffleStd' (authored by neher).
Merge branch 'T29323-RandomShuffleStd'
Oct 6 2022, 9:41 AM
neher committed rMITKDIFFb70450663103: random_shuffle --> random (authored by neher).
random_shuffle --> random
Oct 6 2022, 9:41 AM

Oct 5 2022

neher committed rMITKDIFF877f25e2f169: Merge branch 'T29323-WindowsDcl' (authored by neher).
Merge branch 'T29323-WindowsDcl'
Oct 5 2022, 8:16 PM
neher committed rMITKDIFF3a7916b18cd3: add missing include (authored by neher).
add missing include
Oct 5 2022, 8:16 PM
neher triaged T29323: Fix windows dcl as Normal priority.
Oct 5 2022, 8:15 PM · MITK Diffusion
neher committed rMITKDIFFac8b247560aa: Merge branch 'T29321-HealthineersDicomTag' (authored by neher).
Merge branch 'T29321-HealthineersDicomTag'
Oct 5 2022, 8:41 AM
neher committed rMITKDIFFf3aac4693b28: Add siemens healthineers as vendors (authored by neher).
Add siemens healthineers as vendors
Oct 5 2022, 8:40 AM
neher triaged T29321: Diffusion dicom reader not checling for vendor "Siemens Healthineers" as Normal priority.
Oct 5 2022, 8:37 AM · MITK Diffusion

Oct 4 2022

neher closed T29320: Make trk streamline flip possible on load as Resolved.
Oct 4 2022, 12:28 PM · MITK Diffusion
neher committed rMITKDIFFb0389a5ac38c: Merge branch 'T29320-TrkFlip' (authored by neher).
Merge branch 'T29320-TrkFlip'
Oct 4 2022, 11:58 AM
neher committed rMITKDIFFefeb7594ebdb: Added flip option on load (authored by neher).
Added flip option on load
Oct 4 2022, 11:57 AM
neher triaged T29320: Make trk streamline flip possible on load as Normal priority.
Oct 4 2022, 11:53 AM · MITK Diffusion
neher closed T28947: tract rad as Resolved.
Oct 4 2022, 11:52 AM · MITK Diffusion
neher committed rMITKDIFF81136d7bb0b2: undefined reference dcmtk dcmtract fix (authored by neher).
undefined reference dcmtk dcmtract fix
Oct 4 2022, 11:37 AM
neher renamed T29319: DCMTK undefined reference from DCMTK linker error to DCMTK undefined reference.
Oct 4 2022, 11:36 AM · MITK Diffusion
neher triaged T29319: DCMTK undefined reference as Normal priority.
Oct 4 2022, 11:35 AM · MITK Diffusion

Aug 9 2022

neher closed T29255: [Myeloma] perform pelvis T1 segmentation for missing subjects and calculate radiomics parameters as Resolved.
Aug 9 2022, 9:48 AM
neher closed T29254: [Myeloma] Calculate dice scores for external cohorts as Resolved.
Aug 9 2022, 9:48 AM

Aug 5 2022

neher added a comment to T29255: [Myeloma] perform pelvis T1 segmentation for missing subjects and calculate radiomics parameters.

Manually added the nnU-Net segmentations of the missing cases to the data folder in /E132-Projekte/Projects/2021_GK_MR_MM/Pelvis/Pelvis_HD7_Ext/

Aug 5 2022, 2:04 PM

Aug 4 2022

neher triaged T29255: [Myeloma] perform pelvis T1 segmentation for missing subjects and calculate radiomics parameters as High priority.
Aug 4 2022, 2:52 PM
neher created T29255: [Myeloma] perform pelvis T1 segmentation for missing subjects and calculate radiomics parameters.
Aug 4 2022, 2:47 PM
neher created T29254: [Myeloma] Calculate dice scores for external cohorts.
Aug 4 2022, 2:44 PM
neher closed T29223: Vergleichsmodell: Stufen des diffusen Befalls (Radiologen-Messung) as Resolved.
Aug 4 2022, 2:37 PM

Aug 2 2022

neher edited projects for T28849: Remove fiber parts only removes parts if point inside mask, added: MITK Diffusion; removed MITK.
Aug 2 2022, 1:48 PM · MITK Diffusion
neher closed T29251: Update readme as Resolved.
Aug 2 2022, 1:47 PM · MITK Diffusion
neher committed rMITKDIFFff73e42bcd4d: Merge branch 'T29251-Readme' (authored by neher).
Merge branch 'T29251-Readme'
Aug 2 2022, 10:20 AM
neher committed rMITKDIFF5bc7a2c5ce8f: Update readme (authored by neher).
Update readme
Aug 2 2022, 10:13 AM
neher claimed T29251: Update readme.
Aug 2 2022, 10:10 AM · MITK Diffusion

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