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Oct 6 2022

neher closed T29321: Diffusion dicom reader not checling for vendor "Siemens Healthineers" as Resolved.
Oct 6 2022, 2:39 PM · MITK Diffusion
neher committed rMITKDIFF91bdab0b79cc: Merge branch 'T29323-RandomShuffleStd' (authored by neher).
Merge branch 'T29323-RandomShuffleStd'
Oct 6 2022, 9:41 AM
neher committed rMITKDIFFb70450663103: random_shuffle --> random (authored by neher).
random_shuffle --> random
Oct 6 2022, 9:41 AM

Oct 5 2022

neher committed rMITKDIFF877f25e2f169: Merge branch 'T29323-WindowsDcl' (authored by neher).
Merge branch 'T29323-WindowsDcl'
Oct 5 2022, 8:16 PM
neher committed rMITKDIFF3a7916b18cd3: add missing include (authored by neher).
add missing include
Oct 5 2022, 8:16 PM
neher triaged T29323: Fix windows dcl as Normal priority.
Oct 5 2022, 8:15 PM · MITK Diffusion
neher committed rMITKDIFFac8b247560aa: Merge branch 'T29321-HealthineersDicomTag' (authored by neher).
Merge branch 'T29321-HealthineersDicomTag'
Oct 5 2022, 8:41 AM
neher committed rMITKDIFFf3aac4693b28: Add siemens healthineers as vendors (authored by neher).
Add siemens healthineers as vendors
Oct 5 2022, 8:40 AM
neher triaged T29321: Diffusion dicom reader not checling for vendor "Siemens Healthineers" as Normal priority.
Oct 5 2022, 8:37 AM · MITK Diffusion

Oct 4 2022

neher closed T29320: Make trk streamline flip possible on load as Resolved.
Oct 4 2022, 12:28 PM · MITK Diffusion
neher committed rMITKDIFFb0389a5ac38c: Merge branch 'T29320-TrkFlip' (authored by neher).
Merge branch 'T29320-TrkFlip'
Oct 4 2022, 11:58 AM
neher committed rMITKDIFFefeb7594ebdb: Added flip option on load (authored by neher).
Added flip option on load
Oct 4 2022, 11:57 AM
neher triaged T29320: Make trk streamline flip possible on load as Normal priority.
Oct 4 2022, 11:53 AM · MITK Diffusion
neher closed T28947: tract rad as Resolved.
Oct 4 2022, 11:52 AM · MITK Diffusion
neher committed rMITKDIFF81136d7bb0b2: undefined reference dcmtk dcmtract fix (authored by neher).
undefined reference dcmtk dcmtract fix
Oct 4 2022, 11:37 AM
neher renamed T29319: DCMTK undefined reference from DCMTK linker error to DCMTK undefined reference.
Oct 4 2022, 11:36 AM · MITK Diffusion
neher triaged T29319: DCMTK undefined reference as Normal priority.
Oct 4 2022, 11:35 AM · MITK Diffusion

Aug 9 2022

neher closed T29255: [Myeloma] perform pelvis T1 segmentation for missing subjects and calculate radiomics parameters as Resolved.
Aug 9 2022, 9:48 AM
neher closed T29254: [Myeloma] Calculate dice scores for external cohorts as Resolved.
Aug 9 2022, 9:48 AM

Aug 5 2022

neher added a comment to T29255: [Myeloma] perform pelvis T1 segmentation for missing subjects and calculate radiomics parameters.

Manually added the nnU-Net segmentations of the missing cases to the data folder in /E132-Projekte/Projects/2021_GK_MR_MM/Pelvis/Pelvis_HD7_Ext/

Aug 5 2022, 2:04 PM

Aug 4 2022

neher triaged T29255: [Myeloma] perform pelvis T1 segmentation for missing subjects and calculate radiomics parameters as High priority.
Aug 4 2022, 2:52 PM
neher created T29255: [Myeloma] perform pelvis T1 segmentation for missing subjects and calculate radiomics parameters.
Aug 4 2022, 2:47 PM
neher created T29254: [Myeloma] Calculate dice scores for external cohorts.
Aug 4 2022, 2:44 PM
neher closed T29223: Vergleichsmodell: Stufen des diffusen Befalls (Radiologen-Messung) as Resolved.
Aug 4 2022, 2:37 PM

Aug 2 2022

neher edited projects for T28849: Remove fiber parts only removes parts if point inside mask, added: MITK Diffusion; removed MITK.
Aug 2 2022, 1:48 PM · MITK Diffusion
neher closed T29251: Update readme as Resolved.
Aug 2 2022, 1:47 PM · MITK Diffusion
neher committed rMITKDIFFff73e42bcd4d: Merge branch 'T29251-Readme' (authored by neher).
Merge branch 'T29251-Readme'
Aug 2 2022, 10:20 AM
neher committed rMITKDIFF5bc7a2c5ce8f: Update readme (authored by neher).
Update readme
Aug 2 2022, 10:13 AM
neher claimed T29251: Update readme.
Aug 2 2022, 10:10 AM · MITK Diffusion
neher triaged T29251: Update readme as Normal priority.
Aug 2 2022, 10:10 AM · MITK Diffusion
neher closed T29109: diffusion to itk 5 as Resolved.
Aug 2 2022, 10:10 AM · MITK Diffusion

Jul 4 2022

neher added a comment to T29223: Vergleichsmodell: Stufen des diffusen Befalls (Radiologen-Messung).

Spalte mit Klassen: DB T1&T2&Diff

Jul 4 2022, 11:33 AM

Jun 11 2022

neher reassigned T28772: 2D fiber mapper and VTK9 from neher to r948e.
Jun 11 2022, 8:58 AM · MITK Diffusion
neher updated subscribers of T28772: 2D fiber mapper and VTK9.

Hi Nil. No update yet. @r948e , do you think you could look into this?

Jun 11 2022, 8:58 AM · MITK Diffusion

May 17 2022

neher committed rMITKDIFF2849e4058199: Merge branch 'T29109-DynamicItkThreading' (authored by neher).
Merge branch 'T29109-DynamicItkThreading'
May 17 2022, 11:52 AM
neher committed rMITKDIFFf06091d9c699: using new dynmic threading (authored by neher).
using new dynmic threading
May 17 2022, 11:51 AM
neher committed rMD5d36bd874a80: tensor tracking test data (authored by neher).
tensor tracking test data
May 17 2022, 11:14 AM

Apr 28 2022

neher committed rMITKDIFFe662335bc1bf: Merge branch 'T29109-itk5' (authored by neher).
Merge branch 'T29109-itk5'
Apr 28 2022, 2:18 PM
neher committed rMITKDIFFb8770e886e48: Setting DynamicMultiThreadingOff in all multithreaded filters to enforce old… (authored by neher).
Setting DynamicMultiThreadingOff in all multithreaded filters to enforce old…
Apr 28 2022, 2:14 PM
neher committed rMITKDIFFe4f5779a2bd0: using hxx for vnl includes. building now. to-do: testing (authored by neher).
using hxx for vnl includes. building now. to-do: testing
Apr 28 2022, 12:57 PM

Apr 27 2022

neher committed rMITKDIFFbbacaadf898e: adapted to itk5 (authored by neher).
adapted to itk5
Apr 27 2022, 2:15 PM

Apr 1 2022

neher committed rMITKDIFFb7049d6d25d2: itk 5 compatibility wip (authored by neher).
itk 5 compatibility wip
Apr 1 2022, 12:12 PM
neher triaged T29109: diffusion to itk 5 as High priority.
Apr 1 2022, 12:07 PM · MITK Diffusion

Mar 31 2022

neher committed rMITKDIFF2a48ddbaa8ea: Merge branch 'T28947-TractRad' (authored by neher).
Merge branch 'T28947-TractRad'
Mar 31 2022, 12:40 PM

Mar 9 2022

neher committed rMITKDIFF91c712d9559f: removed tract parcellation (authored by neher).
removed tract parcellation
Mar 9 2022, 11:56 AM
neher committed rMITKDIFF50ce689e30a6: Account for trackvis corner-based coordinates (authored by neher).
Account for trackvis corner-based coordinates
Mar 9 2022, 11:37 AM
neher committed rMITKDIFFc781f453a044: refactoring (authored by neher).
refactoring
Mar 9 2022, 11:34 AM

Feb 28 2022

neher committed rMITKDIFF52efa144000e: enabling more outputs (authored by neher).
enabling more outputs
Feb 28 2022, 3:12 PM

Feb 10 2022

neher committed rMITKDIFFa32d41634e6c: fixed stuck parcellation (authored by neher).
fixed stuck parcellation
Feb 10 2022, 3:48 PM

Feb 7 2022

neher committed rMITKDIFFf433cb5ca332: restructured cdmapps (authored by neher).
restructured cdmapps
Feb 7 2022, 3:57 PM

Feb 4 2022

neher committed rMITKDIFF3596f107e46d: num parcels parameter (authored by neher).
num parcels parameter
Feb 4 2022, 1:34 PM
neher committed rMITKDIFF67e23c7bac14: code for comparing tractometry approaches (authored by neher).
code for comparing tractometry approaches
Feb 4 2022, 12:41 PM
neher committed rMITKDIFF7c8673c42913: move tractometry out of view (authored by neher).
move tractometry out of view
Feb 4 2022, 12:41 PM

Feb 3 2022

neher committed rMITKDIFFb5b19e94e1bf: Interpolating image values (authored by neher).
Interpolating image values
Feb 3 2022, 2:42 PM
neher committed rMITKDIFFfff7dd9d37ca: Visualizing parcdellation statistics (authored by neher).
Visualizing parcdellation statistics
Feb 3 2022, 2:42 PM

Feb 2 2022

neher committed rMITKDIFF32917714164b: refactor color lookuptables. auto select number of segments. (authored by neher).
refactor color lookuptables. auto select number of segments.
Feb 2 2022, 11:32 AM

Jan 31 2022

neher committed rMITKDIFF7c2304981c16: added tract parcellation cmdapp (authored by neher).
added tract parcellation cmdapp
Jan 31 2022, 12:08 PM
neher committed rMITKDIFFeedf6efa5a6a: Created dedicated tract parcellation filter (authored by neher).
Created dedicated tract parcellation filter
Jan 31 2022, 12:08 PM

Jan 27 2022

neher committed rMITKDIFF7b0842815a80: tract parcellation (authored by neher).
tract parcellation
Jan 27 2022, 4:35 PM

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