Description

	DiffusionRelease_NoPython.cmake
	DiffusionRelease.cmake

PackageDepends/

MITK_OpenGL_Config.cmake

RunInstalledApp.sh

mitkFunctionCheckCompilerFlags.cmake

mitkFunctionGetLibrarySearchPaths.cmake

mitkFunctionGetMSVCVersion.cmake

CMakeExternals/

ACVD.cmake

ANN.cmake

Boost.cmake

CTK.cmake

CppUnit.cmake

DCMQI.cmake

DCMTK.cmake

Eigen.cmake

GDCM.cmake

GLUT.cmake

HDF5.cmake

ITK.cmake

MatchPoint.cmake

OpenCV.cmake

OpenIGTLink-54df50de.patch

OpenIGTLink-92bc3d7b.patch

OpenIGTLink.cmake

PCRE.cmake

Poco.cmake

Qwt.cmake

Raptor2.cmake

Rasqal.cmake

Redland.cmake

VTK.cmake

Vigra.cmake

ZLIB.cmake

tinyxml.cmake

MITKModuleManualsList.dox

Documentation/

Doxygen/

3-DeveloperManual/

Toolkit/

ModuleManuals/

Examples/

FirstSteps/

NewModule/

cmdapps/

ExampleToUpperCaseMiniApp.cpp

Modules/

AlgorithmsExt/

mitkCropTimestepsImageFilter.h

include/

src/

mitkCropTimestepsImageFilter.cpp

test/

mitkCropTimestepsImageFilterTest.cpp

AppUtil/

ImageAndValueArithmetic.cpp

BasicImageProcessing/

MiniApps/

FileConverter.cpp

ForwardWavelet.cpp

ImageTypeConverter.cpp

LaplacianOfGaussian.cpp

MaskOutlierFiltering.cpp

MaskRangeBasedFiltering.cpp

MultiResolutionPyramid.cpp

ResampleImage.cpp

ResampleMask.cpp

SingleImageArithmetic.cpp

TwoImageArithmetic.cpp

BoundingShape/

src/

Rendering/

mitkBoundingShapeVtkMapper2D.cpp

CEST/

Chart/

include/

QmitkChartWidget.h

resource/

Chart.js

src/

QmitkChartWidget.cpp

mitkConfigurationHolder.h

Classification/

CLCore/

include/

CLImportanceWeighting/

include/

mitkGeneralizedLinearModel.h

CLMiniApps/

CLLungSegmentation.cpp

CLMRNormalization.cpp

CLMatchPointReg.cpp

CLN4.cpp

CLNrrdToPoly.cpp

CLOverlayRoiCenterOfMass.cpp

CLPlanarFigureToNrrd.cpp

CLPointSetToSegmentation.cpp

CLPolyToNrrd.cpp

CLRandomSampling.cpp

CLRemoveEmptyVoxels.cpp

CLResampleImageToReference.cpp

CLScreenshot.cpp

CLSimpleVoxelClassification.cpp

CLSkullMask.cpp

CLVoxelFeatures.cpp

CLWeighting.cpp

ManualSegmentationEvaluation.cpp

NativeHeadCTSegmentation.cpp

RandomForestTraining.cpp

XRaxSimulationFromCT.cpp

CLUtilities/

src/

MiniAppUtils/

mitkGlobalImageFeaturesParameter.cpp

CommandLine/

include/

mitkCommandLineParser.h

src/

mitkCommandLineParser.cpp

Core/

include/

mitkAnnotationUtils.h

mitkGenericIDRelationRule.h

mitkLevelWindowManager.h

mitkMimeType.h

mitkPlaneGeometry.h

mitkPropertyKeyPath.h

mitkPropertyRelationRuleBase.h

mitkUIDGenerator.h

mitkVtkLayerController.h

mitkLevelWindowManager.cpp

src/

DataManagement/

mitkPlaneGeometry.cpp

mitkSlicedGeometry3D.cpp

mitkLevelWindowManagerTest.cpp

test/

mitkPlaneGeometryTest.cpp

CppMicroServices/

core/

include/

usLDAPFilter.h

usLDAPProp.h

usModuleEvent.h

usModuleInfo.h

usModuleVersion.h

usServiceEvent.h

usSharedLibrary.h

DicomRT/

autoload/

IO/

include/

mitkRTConstants.h

test/

FiberDirectionExtraction.cpp

DiffusionImaging/

DiffusionCmdApps/

Connectomics/

NetworkCreation.cpp

NetworkStatistics.cpp

FiberProcessing/

FiberClustering.cpp

Fiberfox/

RandomFiberPhantom.cpp

Misc/

CopyGeometry.cpp

DImp.cpp

DReg.cpp

DiffusionDICOMLoader.cpp

DmriDenoising.cpp

FileFormatConverter.cpp

FlipPeaks.cpp

HeadMotionCorrection.cpp

Python/

Quantification/

DiffusionKurtosisFit.cpp

MultishellMethods.cpp

QballReconstruction.cpp

TensorDerivedMapsExtraction.cpp

TensorReconstruction.cpp

Tractography/

GlobalTractography.cpp

RfTraining.cpp

StreamlineTractography.cpp

TractographyEvaluation/

AnchorConstrainedPlausibility.cpp

CalculateOverlap.cpp

CheckEpsAndOverlap.cpp

ExtractSimilarTracts.cpp

GetOverlappingTracts.cpp

MergeOverlappingTracts.cpp

PeaksAngularError.cpp

DiffusionCore/

PythonRequirements.txt

autoload/

IO/

mitkDiffusionImageDicomReaderService.cpp

mitkDiffusionImageNiftiReaderService.cpp

mitkDiffusionImageNrrdReaderService.cpp

include/

DicomImport/

mitkDiffusionDICOMFileReader.h

IODataStructures/

Properties/

mitkDiffusionPropertyHelper.h

src/

DicomImport/

mitkDiffusionDICOMFileReader.cpp

IODataStructures/

Properties/

mitkDiffusionPropertyHelper.cpp

mitkDiffusionFunctionCollection.cpp

FiberTracking/

Algorithms/

GibbsTracking/

mitkParticle.h

TrackingHandlers/

mitkTrackingHandlerPeaks.cpp

mitkTrackingHandlerPeaks.h

Fiberfox/

Sequences/

mitkFastSpinEcho.h

mitkSingleShotEpi.h

itkKspaceImageFilter.cpp

itkKspaceImageFilter.h

itkRandomPhantomFilter.cpp

itkRandomPhantomFilter.h

itkTractsToDWIImageFilter.cpp

itkTractsToDWIImageFilter.h

IODataStructures/

mitkFiberfoxParameters.cpp

mitkFiberfoxParameters.h

Gizmo/

src/

mitkGizmoInteractor.cpp

mitkGizmoMapper2D.cpp

ImageStatistics/

Testing/

mitkImageStatisticsCalculatorTest.cpp

mitkImageStatisticsCalculator.cpp

mitkImageStatisticsCalculator.h

mitkImageStatisticsConstants.h

ImageStatisticsUI/

QmitkImageStatisticsCalculationJob.cpp

Qmitk/

QmitkImageStatisticsCalculationJob.h

QmitkImageStatisticsTableModel.cpp

QmitkImageStatisticsTableModel.h

QmitkImageStatisticsTreeItem.cpp

QmitkImageStatisticsTreeItem.h

QmitkImageStatisticsTreeModel.cpp

	QmitkImageStatisticsTreeModel.h
	QmitkImageStatisticsTableModel.h

QmitkImageStatisticsWidget.cpp

QmitkImageStatisticsWidget.h

QmitkImageStatisticsWidget.ui

QmitkStatisticsModelToStringConverter.cpp

	QmitkStatisticsModelToStringConverter.h
	QmitkTableModelToStringConverter.h

QmitkTableModelToStringConverter.cpp

QmitkTableModelToStringConverter.h

GenericFittingMiniApp.cpp

ModelFit/

cmdapps/

PixelDumpMiniApp.cpp

include/

mitkModelFitConstants.h

mitkModelFitStaticParameterMap.h

mitkScalarListLookupTable.h

ModuleList.cmake

Multilabel/

mitkIGTLMessageFactory.cpp

OpenIGTLink/

mitkIGTLDummyMessage.cpp

mitkIGTLDummyMessage.h

Pharmacokinetics/

cmdapps/

CurveDescriptorMiniApp.cpp

MRPerfusionMiniApp.cpp

MRSignal2ConcentrationMiniApp.cpp

PhotoacousticsAlgorithms/

MitkPABeamformingTool/

PABeamformingTool.cpp

MitkPAResampleCropTool/

SpectralUnmixingAppTimeEval.cpp

PAResampleCropTool.cpp

PhotoacousticsLib/

MitkMCxyz/

MitkMCxyz.cpp

MitkPAPhantomGenerator/

PAPhantomGenerator.cpp

MitkSpectralUnmixing/

SpectralUnmixingApp.cpp

MitkTissueBatchGenerator/

TissueBatchGenerator.cpp

include/

mitkPASpectralUnmixingSO2.h

src/

SUFilter/

mitkPASpectralUnmixingSO2.cpp

QtPython/

Testing/

QmitkDataStorageTreeModelInternalItem.h

mitkCvPythonTest.cpp

mitkVtkPythonTest.cpp

QtWidgets/

include/

QmitkLevelWindowWidgetContextMenu.h

QmitkLineEditLevelWindowWidget.h

QmitkSliderLevelWindowWidget.h

QmitkDataStorageTreeModel.cpp

src/

QmitkDataStorageTreeModelInternalItem.cpp

QmitkLevelWindowWidget.cpp

QmitkLevelWindowWidgetContextMenu.cpp

QmitkLineEditLevelWindowWidget.cpp

QmitkSliderLevelWindowWidget.cpp

QtWidgetsExt/

include/

QmitkPlotWidget.h

RDF/

mitkRESTClientTest.cpp

mitkRESTServerTest.cpp

	REST/
	CppRestSdk/

include/

mitkRESTUtil.h

src/

	mitkIRESTManager.cpp
	mitkRESTServer.cpp

	RESTService/	src/
	CppRestSdk/	src/

	mitkRESTServiceActivator.h
	mitkRESTServer.cpp

RTUI/

Helper/

mitkRTUIConstants.h

ConnectednessFeatureMaps.cpp

SemanticRelations/

include/

mitkLesionData.h

TumorInvasionAnalysis/

MiniApps/

BasicDistanceMaps.cpp

HistogramAdaption.cpp

MriNormalization.cpp

MriOtsuNormalization.cpp

TumorInvasionAnalysisTool.cpp

TumorProgressionMapping.cpp

TumorResponseEvaluationTool.cpp

	Modules/
	Plugins/

	REST/	src/	mitkIRESTObserver.cpp/
	org.mitk.gui.qt.segmentation.rework/	src/	internal/


	org_mitk_gui_qt_segmentation_rework_Activator.cpp

	RESTService/	src/	mitkRESTServiceActivator.cpp/
	org.mitk.gui.qt.segmentation.rework/	src/	internal/


	org_mitk_gui_qt_segmentation_rework_Activator.cpp

Plugins/

PluginList.cmake

org.blueberry.core.runtime/

src/

berryObject.h

org.blueberry.ui.qt/

src/

berryWorkbenchPlugin.cpp

internal/

berryWorkbenchWindow.cpp

QmitkCESTStatisticsView.cpp

org.mitk.gui.qt.cest/

src/

internal/

org.mitk.gui.qt.chartExample/

src/

internal/

ChartExample.cpp

ChartExample.h

ChartExampleControls.ui

org.mitk.gui.qt.classificationsegmentation/

ClassificationRegionGrow.cpp

src/

internal/

ClassificationSegmentation.cpp

org.mitk.gui.qt.common/

src/

QmitkAbstractNodeSelectionWidget.cpp

QmitkAbstractNodeSelectionWidget.h

QmitkMultiNodeSelectionWidget.cpp

QmitkMultiNodeSelectionWidget.h

QmitkSingleNodeSelectionWidget.cpp

QmitkSingleNodeSelectionWidget.h

QmitkNodeSelectionConstants.h

internal/

QmitkFiberQuantificationView.cpp

org.mitk.gui.qt.diffusionimaging.fiberfox/

src/

internal/

QmitkFiberfoxView.cpp

org.mitk.gui.qt.diffusionimaging.fiberprocessing/

src/

internal/

QmitkFiberQuantificationView.h

org.mitk.gui.qt.diffusionimaging.preprocessing/

src/

internal/

QmitkPreprocessingView.cpp

org.mitk.gui.qt.diffusionimaging.python/

plugin.xml

resources/

tractseg.py

org.mitk.gui.qt.diffusionimaging.tractography/

src/

internal/

QmitkStreamlineTrackingView.cpp

QmitkStreamlineTrackingViewControls.ui

org.mitk.gui.qt.measurementtoolbox/

src/

internal/

QmitkImageStatisticsView.cpp

QmitkImageStatisticsView.h

org.mitk.gui.qt.multilabelsegmentation/

MultiLabelSegmentationUtilities.qrc

resources/

src/

internal/

SegmentationUtilities/

ConvertToMl

QmitkConvertToMlWidget.cpp

QmitkConvertToMlWidget.h

QmitkConvertToMlWidgetControls.ui

QmitkMultiLabelSegmentationUtilitiesView.cpp

QmitkMultiLabelSegmentationUtilitiesView.h

org.mitk.gui.qt.radiomics/

org_mitk_gui_qt_segmentation_rework_Activator.cpp

org.mitk.gui.qt.segmentation.rework/

manifest_headers.cmake

src/

internal/

org_mitk_gui_qt_segmentation_rework_Activator.h

SuperBuild.cmake

Utilities/

mbilog/

mbilog.h

mbilogLogMessage.h

rMITK22929f3df56f

.gitignore

CMake/BuildConfigurations/DiffusionRelease.cmake

CMake/BuildConfigurations/DiffusionRelease_NoPython.cmake

CMake/PackageDepends/MITK_OpenGL_Config.cmake

CMake/RunInstalledApp.sh

CMake/mitkFunctionCheckCompilerFlags.cmake

CMake/mitkFunctionGetLibrarySearchPaths.cmake

CMake/mitkFunctionGetMSVCVersion.cmake

CMakeExternals/ACVD.cmake

CMakeExternals/ANN.cmake

CMakeExternals/Boost.cmake

CMakeExternals/CTK.cmake

CMakeExternals/CppUnit.cmake

CMakeExternals/DCMQI.cmake

CMakeExternals/DCMTK.cmake

CMakeExternals/Eigen.cmake

CMakeExternals/GDCM.cmake

CMakeExternals/GLUT.cmake

CMakeExternals/HDF5.cmake

CMakeExternals/ITK.cmake

CMakeExternals/MatchPoint.cmake

CMakeExternals/OpenCV.cmake

CMakeExternals/OpenIGTLink-54df50de.patch

CMakeExternals/OpenIGTLink-92bc3d7b.patch

CMakeExternals/OpenIGTLink.cmake

CMakeExternals/PCRE.cmake

CMakeExternals/Poco.cmake

CMakeExternals/Qwt.cmake

CMakeExternals/Raptor2.cmake

CMakeExternals/Rasqal.cmake

CMakeExternals/Redland.cmake

CMakeExternals/VTK.cmake

CMakeExternals/Vigra.cmake

CMakeExternals/ZLIB.cmake

CMakeExternals/tinyxml.cmake

CMakeLists.txt

Documentation/Doxygen/3-DeveloperManual/Toolkit/ModuleManuals/MITKModuleManualsList.dox

Examples/FirstSteps/NewModule/cmdapps/ExampleToUpperCaseMiniApp.cpp

Modules/AlgorithmsExt/files.cmake

Modules/AlgorithmsExt/include/mitkCropTimestepsImageFilter.h

Modules/AlgorithmsExt/src/mitkCropTimestepsImageFilter.cpp

Modules/AlgorithmsExt/test/files.cmake

Modules/AlgorithmsExt/test/mitkCropTimestepsImageFilterTest.cpp

Modules/AppUtil/CMakeLists.txt

Modules/BasicImageProcessing/MiniApps/FileConverter.cpp

Modules/BasicImageProcessing/MiniApps/ForwardWavelet.cpp

Modules/BasicImageProcessing/MiniApps/ImageAndValueArithmetic.cpp

Modules/BasicImageProcessing/MiniApps/ImageTypeConverter.cpp

Modules/BasicImageProcessing/MiniApps/LaplacianOfGaussian.cpp

Modules/BasicImageProcessing/MiniApps/MaskOutlierFiltering.cpp

Modules/BasicImageProcessing/MiniApps/MaskRangeBasedFiltering.cpp

Modules/BasicImageProcessing/MiniApps/MultiResolutionPyramid.cpp

Modules/BasicImageProcessing/MiniApps/ResampleImage.cpp

Modules/BasicImageProcessing/MiniApps/ResampleMask.cpp

Modules/BasicImageProcessing/MiniApps/SingleImageArithmetic.cpp

Modules/BasicImageProcessing/MiniApps/TwoImageArithmetic.cpp

Modules/BoundingShape/src/Rendering/mitkBoundingShapeVtkMapper2D.cpp

Modules/CEST/CMakeLists.txt

Modules/Chart/include/QmitkChartWidget.h

Modules/Chart/resource/Chart.js

Modules/Chart/src/QmitkChartWidget.cpp

Modules/Classification/CLCore/include/mitkConfigurationHolder.h

Modules/Classification/CLImportanceWeighting/include/mitkGeneralizedLinearModel.h

Modules/Classification/CLMiniApps/CL2Dto3DImage.cpp

Modules/Classification/CLMiniApps/CLBrainMask.cpp

Modules/Classification/CLMiniApps/CLDicom2Nrrd.cpp

Modules/Classification/CLMiniApps/CLImageCropper.cpp

Modules/Classification/CLMiniApps/CLLungSegmentation.cpp

Modules/Classification/CLMiniApps/CLMRNormalization.cpp

Modules/Classification/CLMiniApps/CLMatchPointReg.cpp

Modules/Classification/CLMiniApps/CLN4.cpp

Modules/Classification/CLMiniApps/CLNrrdToPoly.cpp

Modules/Classification/CLMiniApps/CLOverlayRoiCenterOfMass.cpp

Modules/Classification/CLMiniApps/CLPlanarFigureToNrrd.cpp

Modules/Classification/CLMiniApps/CLPointSetToSegmentation.cpp

Modules/Classification/CLMiniApps/CLPolyToNrrd.cpp

Modules/Classification/CLMiniApps/CLRandomSampling.cpp

Modules/Classification/CLMiniApps/CLRemoveEmptyVoxels.cpp

Modules/Classification/CLMiniApps/CLResampleImageToReference.cpp

Modules/Classification/CLMiniApps/CLScreenshot.cpp

Modules/Classification/CLMiniApps/CLSimpleVoxelClassification.cpp

Modules/Classification/CLMiniApps/CLSkullMask.cpp

Modules/Classification/CLMiniApps/CLVoxelFeatures.cpp

Modules/Classification/CLMiniApps/CLWeighting.cpp

Modules/Classification/CLMiniApps/ManualSegmentationEvaluation.cpp

Modules/Classification/CLMiniApps/NativeHeadCTSegmentation.cpp

Modules/Classification/CLMiniApps/RandomForestTraining.cpp

Modules/Classification/CLMiniApps/XRaxSimulationFromCT.cpp

Modules/Classification/CLUtilities/src/MiniAppUtils/mitkGlobalImageFeaturesParameter.cpp

Modules/CommandLine/include/mitkCommandLineParser.h

Modules/CommandLine/src/mitkCommandLineParser.cpp

Modules/Core/include/mitkAnnotationUtils.h

Modules/Core/include/mitkGenericIDRelationRule.h

Modules/Core/include/mitkLevelWindowManager.h

Modules/Core/include/mitkMimeType.h

Modules/Core/include/mitkPlaneGeometry.h

Modules/Core/include/mitkPropertyKeyPath.h

Modules/Core/include/mitkPropertyRelationRuleBase.h

Modules/Core/include/mitkUIDGenerator.h

Modules/Core/include/mitkVtkLayerController.h

Modules/Core/src/DataManagement/mitkLevelWindowManager.cpp

Modules/Core/src/DataManagement/mitkPlaneGeometry.cpp

Modules/Core/src/DataManagement/mitkSlicedGeometry3D.cpp

Modules/Core/test/mitkLevelWindowManagerTest.cpp

Modules/Core/test/mitkPlaneGeometryTest.cpp

Modules/CppMicroServices/core/include/usLDAPFilter.h

Modules/CppMicroServices/core/include/usLDAPProp.h

Modules/CppMicroServices/core/include/usModuleEvent.h

Modules/CppMicroServices/core/include/usModuleInfo.h

Modules/CppMicroServices/core/include/usModuleVersion.h

Modules/CppMicroServices/core/include/usServiceEvent.h

Modules/CppMicroServices/core/include/usSharedLibrary.h

Modules/CppRestSdk

Modules/CppRestSdk/CMakeLists.txt

Modules/CppRestSdk/files.cmake

Modules/CppRestSdk/include

Modules/CppRestSdk/include/mitkDICOMWeb.h

Modules/CppRestSdk/include/mitkRESTClient.h

Modules/CppRestSdk/include/mitkRESTServer.h

Modules/CppRestSdk/include/mitkRESTUtil.h

Modules/CppRestSdk/src

Modules/CppRestSdk/src/mitkDICOMWeb.cpp

Modules/CppRestSdk/src/mitkRESTClient.cpp

Modules/CppRestSdk/src/mitkRESTServer.cpp

Modules/DicomRT/CMakeLists.txt

Modules/DicomRT/autoload/IO/CMakeLists.txt

Modules/DicomRT/include/mitkRTConstants.h

Modules/DicomRT/test/CMakeLists.txt

Modules/DiffusionImaging/DiffusionCmdApps/Connectomics/NetworkCreation.cpp

Modules/DiffusionImaging/DiffusionCmdApps/Connectomics/NetworkStatistics.cpp

Modules/DiffusionImaging/DiffusionCmdApps/FiberProcessing/FiberClustering.cpp

Modules/DiffusionImaging/DiffusionCmdApps/FiberProcessing/FiberDirectionExtraction.cpp

Modules/DiffusionImaging/DiffusionCmdApps/FiberProcessing/FiberExtraction.cpp

Modules/DiffusionImaging/DiffusionCmdApps/FiberProcessing/FiberProcessing.cpp

Modules/DiffusionImaging/DiffusionCmdApps/FiberProcessing/FitFibersToImage.cpp

Modules/DiffusionImaging/DiffusionCmdApps/Fiberfox/Fiberfox.cpp

Modules/DiffusionImaging/DiffusionCmdApps/Fiberfox/RandomFiberPhantom.cpp

Modules/DiffusionImaging/DiffusionCmdApps/Misc/CopyGeometry.cpp

Modules/DiffusionImaging/DiffusionCmdApps/Misc/DImp.cpp

Modules/DiffusionImaging/DiffusionCmdApps/Misc/DReg.cpp

Modules/DiffusionImaging/DiffusionCmdApps/Misc/DiffusionDICOMLoader.cpp

Modules/DiffusionImaging/DiffusionCmdApps/Misc/DmriDenoising.cpp

Modules/DiffusionImaging/DiffusionCmdApps/Misc/FileFormatConverter.cpp

Modules/DiffusionImaging/DiffusionCmdApps/Misc/FlipPeaks.cpp

Modules/DiffusionImaging/DiffusionCmdApps/Misc/HeadMotionCorrection.cpp

Modules/DiffusionImaging/DiffusionCmdApps/Misc/ImageResampler.cpp

Modules/DiffusionImaging/DiffusionCmdApps/Misc/PeakExtraction.cpp

Modules/DiffusionImaging/DiffusionCmdApps/Misc/Registration.cpp

Modules/DiffusionImaging/DiffusionCmdApps/Misc/RoundBvalues.cpp

Modules/DiffusionImaging/DiffusionCmdApps/Misc/ShToOdfImage.cpp

Modules/DiffusionImaging/DiffusionCmdApps/Python/BrainExtraction.cpp

Modules/DiffusionImaging/DiffusionCmdApps/Quantification/CMakeLists.txt

Modules/DiffusionImaging/DiffusionCmdApps/Quantification/DiffusionIndices.cpp

Modules/DiffusionImaging/DiffusionCmdApps/Quantification/DiffusionKurtosisFit.cpp

Modules/DiffusionImaging/DiffusionCmdApps/Quantification/MultishellMethods.cpp

Modules/DiffusionImaging/DiffusionCmdApps/Quantification/QballReconstruction.cpp

Modules/DiffusionImaging/DiffusionCmdApps/Quantification/TensorDerivedMapsExtraction.cpp

Modules/DiffusionImaging/DiffusionCmdApps/Quantification/TensorReconstruction.cpp

Modules/DiffusionImaging/DiffusionCmdApps/Tractography/GlobalTractography.cpp

Modules/DiffusionImaging/DiffusionCmdApps/Tractography/RfTraining.cpp

Modules/DiffusionImaging/DiffusionCmdApps/Tractography/StreamlineTractography.cpp

Modules/DiffusionImaging/DiffusionCmdApps/TractographyEvaluation/AnchorConstrainedPlausibility.cpp

Modules/DiffusionImaging/DiffusionCmdApps/TractographyEvaluation/CalculateOverlap.cpp

Modules/DiffusionImaging/DiffusionCmdApps/TractographyEvaluation/CheckEpsAndOverlap.cpp

Modules/DiffusionImaging/DiffusionCmdApps/TractographyEvaluation/ExtractSimilarTracts.cpp

Modules/DiffusionImaging/DiffusionCmdApps/TractographyEvaluation/GetOverlappingTracts.cpp

Modules/DiffusionImaging/DiffusionCmdApps/TractographyEvaluation/MergeOverlappingTracts.cpp

Modules/DiffusionImaging/DiffusionCmdApps/TractographyEvaluation/PeaksAngularError.cpp

Modules/DiffusionImaging/DiffusionCore/PythonRequirements.txt

Modules/DiffusionImaging/DiffusionCore/autoload/IO/mitkDiffusionImageDicomReaderService.cpp

Modules/DiffusionImaging/DiffusionCore/autoload/IO/mitkDiffusionImageNiftiReaderService.cpp

Modules/DiffusionImaging/DiffusionCore/autoload/IO/mitkDiffusionImageNrrdReaderService.cpp

Modules/DiffusionImaging/DiffusionCore/include/DicomImport/mitkDiffusionDICOMFileReader.h

Modules/DiffusionImaging/DiffusionCore/include/IODataStructures/Properties/mitkDiffusionPropertyHelper.h

Modules/DiffusionImaging/DiffusionCore/src/DicomImport/mitkDiffusionDICOMFileReader.cpp

Modules/DiffusionImaging/DiffusionCore/src/IODataStructures/Properties/mitkDiffusionPropertyHelper.cpp

Modules/DiffusionImaging/DiffusionCore/src/mitkDiffusionFunctionCollection.cpp

Modules/DiffusionImaging/FiberTracking/Algorithms/GibbsTracking/mitkParticle.h

Modules/DiffusionImaging/FiberTracking/Algorithms/TrackingHandlers/mitkTrackingHandlerPeaks.cpp

Modules/DiffusionImaging/FiberTracking/Algorithms/TrackingHandlers/mitkTrackingHandlerPeaks.h

Modules/DiffusionImaging/FiberTracking/Fiberfox/Sequences/mitkFastSpinEcho.h

Modules/DiffusionImaging/FiberTracking/Fiberfox/Sequences/mitkSingleShotEpi.h

Modules/DiffusionImaging/FiberTracking/Fiberfox/itkKspaceImageFilter.cpp

Modules/DiffusionImaging/FiberTracking/Fiberfox/itkKspaceImageFilter.h

Modules/DiffusionImaging/FiberTracking/Fiberfox/itkRandomPhantomFilter.cpp

Modules/DiffusionImaging/FiberTracking/Fiberfox/itkRandomPhantomFilter.h

Modules/DiffusionImaging/FiberTracking/Fiberfox/itkTractsToDWIImageFilter.cpp

Modules/DiffusionImaging/FiberTracking/Fiberfox/itkTractsToDWIImageFilter.h

Modules/DiffusionImaging/FiberTracking/IODataStructures/mitkFiberfoxParameters.cpp

Modules/DiffusionImaging/FiberTracking/IODataStructures/mitkFiberfoxParameters.h

Modules/Gizmo/src/mitkGizmoInteractor.cpp

Modules/Gizmo/src/mitkGizmoMapper2D.cpp

Modules/ImageStatistics/Testing/mitkImageStatisticsCalculatorTest.cpp

Modules/ImageStatistics/mitkImageStatisticsCalculator.cpp

Modules/ImageStatistics/mitkImageStatisticsCalculator.h

Modules/ImageStatistics/mitkImageStatisticsConstants.h

Modules/ImageStatisticsUI/CMakeLists.txt

Modules/ImageStatisticsUI/Qmitk/QmitkImageStatisticsCalculationJob.cpp

Modules/ImageStatisticsUI/Qmitk/QmitkImageStatisticsCalculationJob.h

Modules/ImageStatisticsUI/Qmitk/QmitkImageStatisticsTableModel.cpp

Modules/ImageStatisticsUI/Qmitk/QmitkImageStatisticsTableModel.h

Modules/ImageStatisticsUI/Qmitk/QmitkImageStatisticsTreeItem.cpp

Modules/ImageStatisticsUI/Qmitk/QmitkImageStatisticsTreeItem.h

Modules/ImageStatisticsUI/Qmitk/QmitkImageStatisticsTreeModel.cpp

Modules/ImageStatisticsUI/Qmitk/QmitkImageStatisticsTreeModel.h

Modules/ImageStatisticsUI/Qmitk/QmitkImageStatisticsWidget.cpp

Modules/ImageStatisticsUI/Qmitk/QmitkImageStatisticsWidget.h

Modules/ImageStatisticsUI/Qmitk/QmitkImageStatisticsWidget.ui

Modules/ImageStatisticsUI/Qmitk/QmitkStatisticsModelToStringConverter.cpp

Modules/ImageStatisticsUI/Qmitk/QmitkStatisticsModelToStringConverter.h

Modules/ImageStatisticsUI/Qmitk/QmitkTableModelToStringConverter.cpp

Modules/ImageStatisticsUI/Qmitk/QmitkTableModelToStringConverter.h

Modules/ImageStatisticsUI/files.cmake

Modules/ModelFit/cmdapps/GenericFittingMiniApp.cpp

Modules/ModelFit/cmdapps/PixelDumpMiniApp.cpp

Modules/ModelFit/include/mitkModelFitConstants.h

Modules/ModelFit/include/mitkModelFitStaticParameterMap.h

Modules/ModelFit/include/mitkScalarListLookupTable.h

Modules/ModuleList.cmake

Modules/Multilabel/CMakeLists.txt

Modules/OpenIGTLink/mitkIGTLDummyMessage.cpp

Modules/OpenIGTLink/mitkIGTLDummyMessage.h

Modules/OpenIGTLink/mitkIGTLMessageFactory.cpp

Modules/Pharmacokinetics/cmdapps/CurveDescriptorMiniApp.cpp

Modules/Pharmacokinetics/cmdapps/MRPerfusionMiniApp.cpp

Modules/Pharmacokinetics/cmdapps/MRSignal2ConcentrationMiniApp.cpp

Modules/PhotoacousticsAlgorithms/CMakeLists.txt

Modules/PhotoacousticsAlgorithms/MitkPABeamformingTool/CMakeLists.txt

Modules/PhotoacousticsAlgorithms/MitkPABeamformingTool/PABeamformingTool.cpp

Modules/PhotoacousticsAlgorithms/MitkPAResampleCropTool/CMakeLists.txt

Modules/PhotoacousticsAlgorithms/MitkPAResampleCropTool/PAResampleCropTool.cpp

Modules/PhotoacousticsLib/MitkMCxyz/MitkMCxyz.cpp

Modules/PhotoacousticsLib/MitkPAPhantomGenerator/PAPhantomGenerator.cpp

Modules/PhotoacousticsLib/MitkSpectralUnmixing/SpectralUnmixingApp.cpp

Modules/PhotoacousticsLib/MitkSpectralUnmixing/SpectralUnmixingAppTimeEval.cpp

Modules/PhotoacousticsLib/MitkTissueBatchGenerator/TissueBatchGenerator.cpp

Modules/PhotoacousticsLib/include/mitkPASpectralUnmixingSO2.h

Modules/PhotoacousticsLib/src/SUFilter/mitkPASpectralUnmixingSO2.cpp

Modules/QtPython/Testing/files.cmake

Modules/QtPython/Testing/mitkCvPythonTest.cpp

Modules/QtPython/Testing/mitkVtkPythonTest.cpp

Modules/QtWidgets/include/QmitkDataStorageTreeModelInternalItem.h

Modules/QtWidgets/include/QmitkLevelWindowWidgetContextMenu.h

Modules/QtWidgets/include/QmitkLineEditLevelWindowWidget.h

Modules/QtWidgets/include/QmitkSliderLevelWindowWidget.h

Modules/QtWidgets/src/QmitkDataStorageTreeModel.cpp

Modules/QtWidgets/src/QmitkDataStorageTreeModelInternalItem.cpp

Modules/QtWidgets/src/QmitkLevelWindowWidget.cpp

Modules/QtWidgets/src/QmitkLevelWindowWidgetContextMenu.cpp

Modules/QtWidgets/src/QmitkLineEditLevelWindowWidget.cpp

Modules/QtWidgets/src/QmitkSliderLevelWindowWidget.cpp

Modules/QtWidgetsExt/CMakeLists.txt

Modules/QtWidgetsExt/include/QmitkPlotWidget.h

Modules/RDF/CMakeLists.txt

Modules/REST/CMakeLists.txt

Modules/REST/documentation/REST.dox

Modules/REST/files.cmake

Modules/REST/include/mitkIRESTManager.h

Modules/REST/include/mitkIRESTObserver.h

Modules/REST/include/mitkRESTClient.h

Modules/REST/include/mitkRESTServer.h

Modules/REST/include/mitkRESTUtil.h

Modules/REST/src/mitkIRESTManager.cpp

Modules/REST/src/mitkIRESTObserver.cpp

Modules/REST/src/mitkRESTClient.cpp

Modules/REST/src/mitkRESTServer.cpp

Modules/REST/test/CMakeLists.txt

Modules/REST/test/files.cmake

Modules/REST/test/mitkRESTClientTest.cpp

Modules/REST/test/mitkRESTServerTest.cpp

Modules/RESTService/CMakeLists.txt

Modules/RESTService/files.cmake

Modules/RESTService/include/mitkRESTManager.h

Modules/RESTService/src/mitkRESTManager.cpp

Modules/RESTService/src/mitkRESTServiceActivator.cpp

Modules/RESTService/src/mitkRESTServiceActivator.h

Modules/RTUI/CMakeLists.txt

Modules/RTUI/Helper/mitkRTUIConstants.h

Modules/SemanticRelations/include/mitkLesionData.h

Modules/TumorInvasionAnalysis/MiniApps/BasicDistanceMaps.cpp

Modules/TumorInvasionAnalysis/MiniApps/ConnectednessFeatureMaps.cpp

Modules/TumorInvasionAnalysis/MiniApps/HistogramAdaption.cpp

Modules/TumorInvasionAnalysis/MiniApps/MriNormalization.cpp

Modules/TumorInvasionAnalysis/MiniApps/MriOtsuNormalization.cpp

Modules/TumorInvasionAnalysis/MiniApps/TumorInvasionAnalysisTool.cpp

Modules/TumorInvasionAnalysis/MiniApps/TumorProgressionMapping.cpp

Modules/TumorInvasionAnalysis/MiniApps/TumorResponseEvaluationTool.cpp

Plugins/PluginList.cmake

Plugins/org.blueberry.core.runtime/src/berryObject.h

Plugins/org.blueberry.ui.qt/CMakeLists.txt

Plugins/org.blueberry.ui.qt/src/berryWorkbenchPlugin.cpp

Plugins/org.blueberry.ui.qt/src/internal/berryWorkbenchWindow.cpp

Plugins/org.mitk.gui.qt.cest/src/internal/QmitkCESTStatisticsView.cpp

Plugins/org.mitk.gui.qt.chartExample/src/internal/ChartExample.cpp

Plugins/org.mitk.gui.qt.chartExample/src/internal/ChartExample.h

Plugins/org.mitk.gui.qt.chartExample/src/internal/ChartExampleControls.ui

Plugins/org.mitk.gui.qt.classificationsegmentation/CMakeLists.txt

Plugins/org.mitk.gui.qt.classificationsegmentation/src/internal/ClassificationRegionGrow.cpp

Plugins/org.mitk.gui.qt.classificationsegmentation/src/internal/ClassificationSegmentation.cpp

Plugins/org.mitk.gui.qt.common/src/QmitkAbstractNodeSelectionWidget.cpp

Plugins/org.mitk.gui.qt.common/src/QmitkAbstractNodeSelectionWidget.h

Plugins/org.mitk.gui.qt.common/src/QmitkMultiNodeSelectionWidget.cpp

Plugins/org.mitk.gui.qt.common/src/QmitkMultiNodeSelectionWidget.h

Plugins/org.mitk.gui.qt.common/src/QmitkSingleNodeSelectionWidget.cpp

Plugins/org.mitk.gui.qt.common/src/QmitkSingleNodeSelectionWidget.h

Plugins/org.mitk.gui.qt.common/src/internal/QmitkNodeSelectionConstants.h

Plugins/org.mitk.gui.qt.diffusionimaging.fiberfox/src/internal/QmitkFiberfoxView.cpp

Plugins/org.mitk.gui.qt.diffusionimaging.fiberprocessing/src/internal/QmitkFiberQuantificationView.cpp

Plugins/org.mitk.gui.qt.diffusionimaging.fiberprocessing/src/internal/QmitkFiberQuantificationView.h

Plugins/org.mitk.gui.qt.diffusionimaging.preprocessing/src/internal/QmitkPreprocessingView.cpp

Plugins/org.mitk.gui.qt.diffusionimaging.python/plugin.xml

Plugins/org.mitk.gui.qt.diffusionimaging.python/resources/tractseg.py

Plugins/org.mitk.gui.qt.diffusionimaging.tractography/src/internal/QmitkStreamlineTrackingView.cpp

Plugins/org.mitk.gui.qt.diffusionimaging.tractography/src/internal/QmitkStreamlineTrackingViewControls.ui

Plugins/org.mitk.gui.qt.measurementtoolbox/src/internal/QmitkImageStatisticsView.cpp

Plugins/org.mitk.gui.qt.measurementtoolbox/src/internal/QmitkImageStatisticsView.h

Plugins/org.mitk.gui.qt.multilabelsegmentation/files.cmake

Plugins/org.mitk.gui.qt.multilabelsegmentation/resources/MultiLabelSegmentationUtilities.qrc

Plugins/org.mitk.gui.qt.multilabelsegmentation/src/internal/SegmentationUtilities/ConvertToMl/QmitkConvertToMlWidget.cpp

Plugins/org.mitk.gui.qt.multilabelsegmentation/src/internal/SegmentationUtilities/ConvertToMl/QmitkConvertToMlWidget.h

Plugins/org.mitk.gui.qt.multilabelsegmentation/src/internal/SegmentationUtilities/ConvertToMl/QmitkConvertToMlWidgetControls.ui

Plugins/org.mitk.gui.qt.multilabelsegmentation/src/internal/SegmentationUtilities/QmitkMultiLabelSegmentationUtilitiesView.cpp

Plugins/org.mitk.gui.qt.multilabelsegmentation/src/internal/SegmentationUtilities/QmitkMultiLabelSegmentationUtilitiesView.h

Plugins/org.mitk.gui.qt.radiomics/CMakeLists.txt

Plugins/org.mitk.gui.qt.segmentation.rework/CMakeLists.txt

Plugins/org.mitk.gui.qt.segmentation.rework/documentation

Plugins/org.mitk.gui.qt.segmentation.rework/documentation/UserManual

Plugins/org.mitk.gui.qt.segmentation.rework/documentation/UserManual/Manual.dox

Plugins/org.mitk.gui.qt.segmentation.rework/documentation/UserManual/icon.xpm

Plugins/org.mitk.gui.qt.segmentation.rework/documentation/doxygen

Plugins/org.mitk.gui.qt.segmentation.rework/documentation/doxygen/modules.dox

Plugins/org.mitk.gui.qt.segmentation.rework/files.cmake

Plugins/org.mitk.gui.qt.segmentation.rework/manifest_headers.cmake

Plugins/org.mitk.gui.qt.segmentation.rework/plugin.xml

Plugins/org.mitk.gui.qt.segmentation.rework/resources

Plugins/org.mitk.gui.qt.segmentation.rework/resources/icon.xpm

Plugins/org.mitk.gui.qt.segmentation.rework/resources/plugin_icon.png

Plugins/org.mitk.gui.qt.segmentation.rework/src/internal/org_mitk_gui_qt_segmentation_rework_Activator.cpp

Plugins/org.mitk.gui.qt.segmentation.rework/src/internal/org_mitk_gui_qt_segmentation_rework_Activator.h

SuperBuild.cmake

Utilities/mbilog/mbilog.h