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eisenman (Matthias Eisenmann)
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Projects (8)

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User Since
Aug 1 2016, 12:10 PM (192 w, 1 d)

Recent Activity

Yesterday

eisenman committed rCHALLENGER21f2c9c6d733: Test that aggregate-than-rank by mean works with two algorithms for two case (authored by eisenman).
Test that aggregate-than-rank by mean works with two algorithms for two case
Mon, Apr 6, 9:10 PM
eisenman committed rCHALLENGER10a4e9d41577: Test that aggregate-than-rank by median works with two algorithms for two case (authored by eisenman).
Test that aggregate-than-rank by median works with two algorithms for two case
Mon, Apr 6, 9:10 PM
eisenman committed rCHALLENGER9f16afc5aad9: Test that aggregate-than-rank raises error for invalid aggregation function (authored by eisenman).
Test that aggregate-than-rank raises error for invalid aggregation function
Mon, Apr 6, 5:55 PM
eisenman committed rCHALLENGER1bfa8f39ea5d: Test that aggregate-than-rank handles ties for two algorithms and one case (authored by eisenman).
Test that aggregate-than-rank handles ties for two algorithms and one case
Mon, Apr 6, 5:28 PM

Fri, Apr 3

eisenman committed rCHALLENGERfec19c1817cd: Test that aggregate-than-rank by mean works with two algorithms for one case (authored by eisenman).
Test that aggregate-than-rank by mean works with two algorithms for one case
Fri, Apr 3, 11:11 PM
eisenman closed T27290: Fix author names in citations as Resolved.
Fri, Apr 3, 10:32 PM · challengeR (v1.0)
eisenman moved T27290: Fix author names in citations from In Progress to Done on the challengeR (v1.0) board.
Fri, Apr 3, 8:44 PM · challengeR (v1.0)
eisenman committed rCHALLENGERc2e6377ec800: Merge branch 'hotfix/T27290-FixAuthorNames' (authored by eisenman).
Merge branch 'hotfix/T27290-FixAuthorNames'
Fri, Apr 3, 8:38 PM
eisenman committed rCHALLENGER37b6ff55eb47: Merge tag 'v0.3.2' into develop (authored by eisenman).
Merge tag 'v0.3.2' into develop
Fri, Apr 3, 8:38 PM
eisenman committed rCHALLENGER0f4dcf88e00f: Bump version number (authored by eisenman).
Bump version number
Fri, Apr 3, 8:30 PM
eisenman committed rCHALLENGER1fffe820b374: Fix author names (authored by eisenman).
Fix author names
Fri, Apr 3, 8:30 PM
eisenman updated the task description for T27290: Fix author names in citations.
Fri, Apr 3, 7:53 PM · challengeR (v1.0)
eisenman committed rCHALLENGER68968a349958: Bump version number (authored by eisenman).
Bump version number
Fri, Apr 3, 7:51 PM
eisenman committed rCHALLENGER89db0a0aa075: Fix author names (authored by eisenman).
Fix author names
Fri, Apr 3, 7:51 PM
eisenman added a comment to T27290: Fix author names in citations.

Ok, this can be a different task. I will fix the authors corresponding to the paper in this task.

Fri, Apr 3, 4:11 PM · challengeR (v1.0)
eisenman added a comment to T27290: Fix author names in citations.

@wiesenfa , @reinkea : Landman should also be mentioned in the generated reports, right?

Fri, Apr 3, 4:07 PM · challengeR (v1.0)
eisenman added a comment to T27290: Fix author names in citations.

This issue will be fixed in v0.3.2.

Fri, Apr 3, 4:07 PM · challengeR (v1.0)
eisenman updated the task description for T27290: Fix author names in citations.
Fri, Apr 3, 3:58 PM · challengeR (v1.0)
eisenman moved T27290: Fix author names in citations from Backlog to In Progress on the challengeR (v1.0) board.
Fri, Apr 3, 3:48 PM · challengeR (v1.0)
eisenman claimed T27290: Fix author names in citations.
Fri, Apr 3, 3:47 PM · challengeR (v1.0)
eisenman triaged T27290: Fix author names in citations as High priority.
Fri, Apr 3, 3:47 PM · challengeR (v1.0)

Thu, Apr 2

eisenman edited projects for T27241: Readme improvements, added: challengeR (v1.0); removed challengeR.
Thu, Apr 2, 11:22 AM · challengeR (v1.0)
eisenman edited projects for T27253: Notify user when multi-task data set is interpreted as single-task data set, added: challengeR (v1.0); removed challengeR.
Thu, Apr 2, 11:21 AM · challengeR (v1.0)
eisenman added a comment to T27253: Notify user when multi-task data set is interpreted as single-task data set.

At the meeting on 30/03/2020 we agreed that the messages should be extended to warn the user of that scenario. Since the column containing the tasks is unknown when the parameter "by" is not specified, an automatic detection can only be realized with a lot of effort.

Thu, Apr 2, 11:21 AM · challengeR (v1.0)
eisenman closed T27254: Challenge attributes are arranged differently depending on sanity check as Wontfix.

In the meeting on 30/03/2020 we agreed that this issue won't be fixed. Cases can appear more than once per algorithm in bootstrapping and thus the sanity check has to be turned off. Performance reasons were also mentioned.

Thu, Apr 2, 11:10 AM · challengeR
eisenman closed T27256: Changes during sanity check can constradict NA handling option as Wontfix.

In the meeting on 30/03/2020 we agreed that this issue won't be fixed. Parameters have to be described properly to raise awareness of this scenario to the user.

Thu, Apr 2, 11:06 AM · challengeR

Wed, Apr 1

eisenman moved T27237: Implement tests for ranking method "aggregate-then-rank" from Backlog to In Progress on the challengeR (v1.0) board.
Wed, Apr 1, 11:53 AM · challengeR (v1.0)
eisenman moved T27252: Multiple cases per algorithm are not detected when missing data was added before from Backlog to In Progress on the challengeR (v1.0) board.
Wed, Apr 1, 11:53 AM · challengeR (v1.0)
eisenman moved T27244: Implement tests for the "challenge" class from Backlog to Done on the challengeR (v1.0) board.
Wed, Apr 1, 11:53 AM · challengeR (v1.0)
eisenman moved T27236: Set up test infrastructure from Backlog to Done on the challengeR (v1.0) board.
Wed, Apr 1, 11:53 AM · challengeR (v1.0)
eisenman edited projects for T27278: Writing documentation, added: challengeR (v1.0); removed challengeR.
Wed, Apr 1, 11:49 AM · challengeR (v1.0)
eisenman edited projects for T27281: Implement tests for ranking method "rank-then-aggregate", added: challengeR (v1.0); removed challengeR.
Wed, Apr 1, 11:48 AM · challengeR (v1.0)
eisenman edited projects for T27282: Implement tests for ranking method "test-then-rank" based on Wilcoxon signed rank test, added: challengeR (v1.0); removed challengeR.
Wed, Apr 1, 11:48 AM · challengeR (v1.0)
eisenman changed the edit policy for T27237: Implement tests for ranking method "aggregate-then-rank".
Wed, Apr 1, 11:47 AM · challengeR (v1.0)
eisenman edited projects for T27237: Implement tests for ranking method "aggregate-then-rank", added: challengeR (v1.0); removed challengeR.
Wed, Apr 1, 11:47 AM · challengeR (v1.0)
eisenman edited projects for T27252: Multiple cases per algorithm are not detected when missing data was added before, added: challengeR (v1.0); removed challengeR.
Wed, Apr 1, 11:46 AM · challengeR (v1.0)
eisenman edited projects for T27244: Implement tests for the "challenge" class, added: challengeR (v1.0); removed challengeR.
Wed, Apr 1, 11:45 AM · challengeR (v1.0)
eisenman changed the edit policy for T27236: Set up test infrastructure.
Wed, Apr 1, 11:44 AM · challengeR (v1.0)

Tue, Mar 31

eisenman moved T27237: Implement tests for ranking method "aggregate-then-rank" from Backlog to In Progress on the challengeR board.
Tue, Mar 31, 9:15 PM · challengeR (v1.0)
eisenman triaged T27282: Implement tests for ranking method "test-then-rank" based on Wilcoxon signed rank test as High priority.
Tue, Mar 31, 9:14 PM · challengeR (v1.0)
eisenman triaged T27281: Implement tests for ranking method "rank-then-aggregate" as High priority.
Tue, Mar 31, 9:13 PM · challengeR (v1.0)
eisenman renamed T27237: Implement tests for ranking method "aggregate-then-rank" from Implement unit tests to Implement tests for ranking method "aggregate-then-rank".
Tue, Mar 31, 9:12 PM · challengeR (v1.0)
eisenman added a comment to T27252: Multiple cases per algorithm are not detected when missing data was added before.

The given example is already available as a unit test.

Tue, Mar 31, 12:33 PM · challengeR (v1.0)
eisenman moved T27244: Implement tests for the "challenge" class from In Progress to Done on the challengeR board.
Tue, Mar 31, 12:28 PM · challengeR (v1.0)
eisenman committed rCHALLENGER2773d2e02a08: Merge branch 'feature/T27244-AddTestsForClassChallenge' into develop (authored by eisenman).
Merge branch 'feature/T27244-AddTestsForClassChallenge' into develop
Tue, Mar 31, 12:26 PM
eisenman committed rCHALLENGER8f6e1ab5a6d6: Use "<-" for assignments (authored by eisenman).
Use "<-" for assignments
Tue, Mar 31, 12:21 PM

Mon, Mar 30

eisenman moved T27252: Multiple cases per algorithm are not detected when missing data was added before from Backlog to In Progress on the challengeR board.
Mon, Mar 30, 4:28 PM · challengeR (v1.0)
eisenman assigned T27252: Multiple cases per algorithm are not detected when missing data was added before to wiesenfa.
Mon, Mar 30, 4:28 PM · challengeR (v1.0)
eisenman triaged T27278: Writing documentation as High priority.
Mon, Mar 30, 4:26 PM · challengeR (v1.0)

Fri, Mar 27

eisenman added a comment to T26853: IGT tutorial step 1 and step 2 do not start.

Another workaround is to configure the environment variable for your executable in Visual Studio. To do so, first select Properties from MitkWorkbench context menu. In the Property Pages dialog, select Configuration PropertiesDebugging. Copy the value of the variable 'Environment'. Paste it in the 'Environment' field of the respective executable.

Fri, Mar 27, 3:55 PM · IGT, MITK
eisenman claimed T26853: IGT tutorial step 1 and step 2 do not start.
Fri, Mar 27, 3:37 PM · IGT, MITK
eisenman closed T27003: Extend representation object handling in NavigationDataObjectVisualizationFilter as Resolved.
Fri, Mar 27, 3:36 PM · IGT, MITK, Restricted Project
eisenman committed rMITK87d68d9fd6f6: Merge branch 'T27003-Integration' (authored by eisenman).
Merge branch 'T27003-Integration'
Fri, Mar 27, 3:34 PM
eisenman committed rMITK18d524bd31e0: Fix compiler errors (authored by eisenman).
Fix compiler errors
Fri, Mar 27, 3:30 PM
eisenman committed rMITK73c265881b18: Merge branch 'T27003-ExtendRepresentationObjectHandlingInNavigationDataObjectVi… (authored by eisenman).
Merge branch 'T27003-ExtendRepresentationObjectHandlingInNavigationDataObjectVi…
Fri, Mar 27, 3:30 PM
eisenman added a comment to T27003: Extend representation object handling in NavigationDataObjectVisualizationFilter.

Pushed new branch T27003-Integration.

Fri, Mar 27, 3:29 PM · IGT, MITK, Restricted Project
eisenman added a comment to T24754: Volume Visualization crashes with some CT images.

Seems that the pixel type is not set properly:
Show details lists "Channel: Unnamed [scalar], PixelType: scalar" for the nrrd file and "Channel: Unnamed [], PixelType: " for the DICOM file.

Fri, Mar 27, 1:29 PM · Restricted Project, MITK
eisenman added a comment to T24754: Volume Visualization crashes with some CT images.

This issue still occurs. Following previous finding still holds true: Volume visualization works for the image if it is exported to nrrd first and then loaded as nrrd.

Fri, Mar 27, 12:55 PM · Restricted Project, MITK
eisenman added a project to T27003: Extend representation object handling in NavigationDataObjectVisualizationFilter: IGT.
Fri, Mar 27, 12:23 PM · IGT, MITK, Restricted Project
eisenman triaged T27260: Spacing points still remain in data manager after closing calibration view as Normal priority.
Fri, Mar 27, 11:21 AM · IGT, MITK
eisenman triaged T27259: Render windows are not uptdated when last time step is selected as Normal priority.
Fri, Mar 27, 10:53 AM · MITK
eisenman committed rCHALLENGERbc61c77277e0: Make expectations more compact (authored by eisenman).
Make expectations more compact
Fri, Mar 27, 8:53 AM

Thu, Mar 26

eisenman created T27256: Changes during sanity check can constradict NA handling option.
Thu, Mar 26, 3:57 PM · challengeR
eisenman committed rCHALLENGERa5263f579658: Test that automatically added NAs are removed (authored by eisenman).
Test that automatically added NAs are removed
Thu, Mar 26, 12:52 PM
eisenman committed rCHALLENGER23d95be78f63: Test that automatically added NAs are replaced by numeric value (authored by eisenman).
Test that automatically added NAs are replaced by numeric value
Thu, Mar 26, 12:42 PM
eisenman committed rCHALLENGER08ba120f137f: Rename variables (authored by eisenman).
Rename variables
Thu, Mar 26, 12:30 PM
eisenman committed rCHALLENGER6caedbcaf8eb: Test that handling of NAs is working as expected for multi-task challenges (authored by eisenman).
Test that handling of NAs is working as expected for multi-task challenges
Thu, Mar 26, 12:30 PM
eisenman committed rCHALLENGER85221f218035: Test that handling of NAs is working as expected for single-task challenges (authored by eisenman).
Test that handling of NAs is working as expected for single-task challenges
Thu, Mar 26, 11:54 AM

Wed, Mar 25

eisenman committed rCHALLENGER5711c2f44400: Test that attributes are set for challenge objects (authored by eisenman).
Test that attributes are set for challenge objects
Wed, Mar 25, 5:18 PM
eisenman created T27254: Challenge attributes are arranged differently depending on sanity check.
Wed, Mar 25, 4:46 PM · challengeR
eisenman committed rCHALLENGERe145f099bc87: Rename variables and data frame names (authored by eisenman).
Rename variables and data frame names
Wed, Mar 25, 3:49 PM
eisenman committed rCHALLENGER07530c924efb: Test that user is notified when multi-task data set is interpreted as single… (authored by eisenman).
Test that user is notified when multi-task data set is interpreted as single…
Wed, Mar 25, 3:37 PM
eisenman committed rCHALLENGERb7472338d7fe: Test that multi-task data set containing one task is interpreted as single-task… (authored by eisenman).
Test that multi-task data set containing one task is interpreted as single-task…
Wed, Mar 25, 3:37 PM
eisenman committed rCHALLENGER9f20169624bf: Test that cases cannot appear more than once per algorithm for multi-task… (authored by eisenman).
Test that cases cannot appear more than once per algorithm for multi-task…
Wed, Mar 25, 2:34 PM
eisenman created T27253: Notify user when multi-task data set is interpreted as single-task data set.
Wed, Mar 25, 1:33 PM · challengeR (v1.0)

Tue, Mar 24

eisenman updated subscribers of T27252: Multiple cases per algorithm are not detected when missing data was added before.
Tue, Mar 24, 6:35 PM · challengeR (v1.0)
eisenman committed rCHALLENGER0427a17768f1: Test that cases cannot appear more than once per algorithm (authored by eisenman).
Test that cases cannot appear more than once per algorithm
Tue, Mar 24, 6:19 PM
eisenman committed rCHALLENGERfc28e2c6ed46: Test that missing algorithm performances are added as NA when requested (authored by eisenman).
Test that missing algorithm performances are added as NA when requested
Tue, Mar 24, 6:08 PM
eisenman updated the task description for T27252: Multiple cases per algorithm are not detected when missing data was added before.
Tue, Mar 24, 6:02 PM · challengeR (v1.0)
eisenman triaged T27252: Multiple cases per algorithm are not detected when missing data was added before as High priority.
Tue, Mar 24, 5:59 PM · challengeR (v1.0)
eisenman added a project to T27244: Implement tests for the "challenge" class: challengeR.
Tue, Mar 24, 3:10 PM · challengeR (v1.0)
eisenman removed a project from T27244: Implement tests for the "challenge" class: challengeR.
Tue, Mar 24, 3:10 PM · challengeR (v1.0)

Mon, Mar 23

eisenman added a member for challengeR: onogur.
Mon, Mar 23, 11:52 AM

Thu, Mar 19

eisenman reopened T27236: Set up test infrastructure as "Open".

Make the task visible in the workboard column "Done".

Thu, Mar 19, 6:13 PM · challengeR (v1.0)
eisenman moved T27244: Implement tests for the "challenge" class from Backlog to In Progress on the challengeR board.
Thu, Mar 19, 5:53 PM · challengeR (v1.0)
eisenman created T27244: Implement tests for the "challenge" class.
Thu, Mar 19, 5:53 PM · challengeR (v1.0)
eisenman closed T27236: Set up test infrastructure as Resolved.
Thu, Mar 19, 2:47 PM · challengeR (v1.0)
eisenman committed rCHALLENGER27eb831ec91c: Integrate package "testthat" (authored by eisenman).
Integrate package "testthat"
Thu, Mar 19, 11:34 AM

Tue, Mar 17

eisenman triaged T27237: Implement tests for ranking method "aggregate-then-rank" as Normal priority.
Tue, Mar 17, 5:18 PM · challengeR (v1.0)
eisenman updated the task description for T27236: Set up test infrastructure.
Tue, Mar 17, 4:41 PM · challengeR (v1.0)
eisenman moved T27236: Set up test infrastructure from Backlog to In Progress on the challengeR board.
Tue, Mar 17, 4:41 PM · challengeR (v1.0)
eisenman triaged T27236: Set up test infrastructure as High priority.
Tue, Mar 17, 4:39 PM · challengeR (v1.0)
eisenman set the image for challengeR to F1532360: profile.
Tue, Mar 17, 4:18 PM
eisenman edited Description on challengeR.
Tue, Mar 17, 4:16 PM
eisenman added a member for challengeR: aguilera.
Tue, Mar 17, 1:10 PM

Feb 13 2020

eisenman added a comment to T27003: Extend representation object handling in NavigationDataObjectVisualizationFilter.

Can this be contributed to the master as is?

Feb 13 2020, 5:35 PM · IGT, MITK, Restricted Project
eisenman updated subscribers of T27003: Extend representation object handling in NavigationDataObjectVisualizationFilter.
Feb 13 2020, 5:34 PM · IGT, MITK, Restricted Project

Jan 20 2020

eisenman committed rMITK4144766e079e: Fix error in method call (authored by eisenman).
Fix error in method call
Jan 20 2020, 2:06 PM
eisenman committed rMITKf34b85a421f4: Fix error caused by signed and unsigned integer comparison (authored by eisenman).
Fix error caused by signed and unsigned integer comparison
Jan 20 2020, 2:06 PM
eisenman committed rMITK204dcf53fd47: Remove duplicate typedef (authored by eisenman).
Remove duplicate typedef
Jan 20 2020, 2:05 PM