Description

mitkBuildConfigurationmitkDiffusion.cmake

mitkFunctionEnableBuildConfiguration.cmake

CMakeExternals/

Eigen.cmake

MITKData.cmake

PatchVTK.cmake

CMakeLists.txt

mitkCoreObjectFactory.cpp

Core/

Code/

Common/

mitkCoreObjectFactory.h

DataManagement/

mitkImage.cpp

IO/

mitkCustomMimeType.cpp

Internal/

mitkCoreActivator.cpp

Rendering/

mitkPointSetGLMapper2D.cpp

mitkPointSetVtkMapper2D.cpp

Testing/

mitkImageDimensionConverterTest.cpp

Documentation/

Doxygen/

Concepts/

ReaderWriterPage.md

Documentation/

Doxygen/

UserManual/

MITKPluginManualsList.dox

Modules/

DiffusionImaging/

DiffusionCore/

Algorithms/

Reconstruction/

itkOrientationDistributionFunction.txx

mitkTeemDiffusionTensor3DReconstructionImageFilter.cpp

IODataStructures/

DiffusionWeightedImages/

mitkNrrdDiffusionImageWriter.cpp

mitkNrrdDiffusionImageWriter.h

Rendering/

vtkThickPlane.cxx

Testing/

mitkB0ExtractionToSeparateImagesFilterTest.cpp

mitkConvertDWITypeTest.cpp

mitkDiffusionDICOMFileReaderTest.cpp

mitkExtractSingleShellTest.cpp

mitkFactoryRegistrationTest.cpp

DiffusionIO/

mitkConnectomicsNetworkIOFactory.cpp

mitkConnectomicsNetworkIOFactory.h

mitkConnectomicsNetworkReader.cpp

mitkConnectomicsNetworkSerializer.cpp

mitkConnectomicsNetworkWriter.cpp

mitkConnectomicsNetworkWriter.h

mitkConnectomicsNetworkWriterFactory.cpp

mitkConnectomicsNetworkWriterFactory.h

mitkConnectomicsObjectFactory.cpp

mitkDiffusionCoreObjectFactory.cpp

mitkDiffusionCoreObjectFactory.h

mitkDiffusionIOMimeTypes.cpp

mitkDiffusionIOMimeTypes.h

mitkDiffusionImageSerializer.cpp

mitkDiffusionModuleActivator.cpp

mitkFiberBundleXReader.cpp

mitkFiberTrackingObjectFactory.cpp

mitkFiberTrackingObjectFactory.h

mitkNrrdDiffusionImageIOFactory.cpp

mitkNrrdDiffusionImageIOFactory.h

mitkNrrdDiffusionImageReader.cpp

mitkNrrdDiffusionImageReader.h

mitkNrrdDiffusionImageWriter.h

mitkNrrdDiffusionImageWriterFactory.cpp

mitkNrrdDiffusionImageWriterFactory.h

mitkNrrdQBallImageIOFactory.cpp

mitkNrrdQBallImageIOFactory.h

mitkNrrdQBallImageReader.cpp

mitkNrrdQBallImageWriter.cpp

mitkNrrdQBallImageWriter.h

mitkNrrdQBallImageWriterFactory.cpp

mitkNrrdQBallImageWriterFactory.h

mitkNrrdTensorImageIOFactory.cpp

mitkNrrdTensorImageIOFactory.h

mitkNrrdTensorImageReader.cpp

mitkNrrdTensorImageReader.h

mitkNrrdTensorImageWriter.cpp

mitkNrrdTensorImageWriter.h

mitkNrrdTensorImageWriterFactory.cpp

mitkNrrdTensorImageWriterFactory.h

mitkQBallImageSerializer.cpp

mitkTensorImageSerializer.cpp

	DiffusionIO/
	FiberTracking/

	mitkConnectomicsNetworkReader.h/
	IODataStructures/	FiberBundleX/


	mitkFiberBundleXReader.h


	IODataStructures/	FiberBundleX/

mitkFiberBundleXReader.h

mitkFiberBundleXSerializer.cpp

mitkFiberBundleXSerializer.h

mitkFiberBundleXWriter.cpp

mitkFiberBundleXWriter.h

	mitkNrrdQBallImageReader.h/
	IODataStructures/	FiberBundleX/


	mitkFiberBundleXReader.h

	DiffusionIO/
	DiffusionCore/	IODataStructures/	DiffusionWeightedImages/

mitkNrrdDiffusionImageWriter.cpp

FiberTracking/

Algorithms/

itkFibersFromPlanarFiguresFilter.cpp

itkTractDensityImageFilter.cpp

itkTractsToDWIImageFilter.cpp

itkTractsToRgbaImageFilter.cpp

itkTractsToVectorImageFilter.cpp

IODataStructures/

FiberBundleX/

mitkFiberBundleX.cpp

mitkFiberBundleX.h

mitkFiberBundleXReader.cpp

mitkFiberBundleXReader.h

mitkFiberBundleXSerializer.cpp

mitkFiberBundleXSerializer.h

mitkFiberBundleXWriter.cpp

mitkFiberBundleXWriter.h

Testing/

mitkFiberBundleXReaderWriterTest.cpp

mitkFiberExtractionTest.cpp

mitkFiberTransformationTest.cpp

mitkFiberfoxAddArtifactsToDwiTest.cpp

mitkFiberfoxSignalGenerationTest.cpp

mitkLocalFiberPlausibilityTest.cpp

mitkPeakExtractionTest.cpp

mitkStreamlineTrackingTest.cpp

mitkFiberTrackingModuleActivator.cpp

MiniApps/

BatchedFolderRegistration.cpp

CopyGeometry.cpp

DICOMLoader.cpp

Documentation/

DiffusionMiniApps.dox

DwiDenoising.cpp

FiberDirectionExtraction.cpp

FiberExtraction.cpp

FiberProcessing.cpp

Fiberfox.cpp

FileFormatConverter.cpp

GibbsTracking.cpp

ImageResampler.cpp

LocalDirectionalFiberPlausibility.cpp

MultishellMethods.cpp

NetworkCreation.cpp

NetworkStatistics.cpp

PeakExtraction.cpp

StreamlineTracking.cpp

TractometerMetrics.cpp

IGT/

DataManagement/

mitkNavigationData.cpp

mitkNavigationData.h

IO/

mitkNavigationDataReaderCSV.cpp

mitkNavigationDataReaderCSV.h

Testing/

mitkNavigationDataSetReaderWriterCSVTest.cpp

mitkNavigationDataSetReaderWriterTest.cpp

	mitkNavigationDataSetReaderWriterXMLTest.cpp
	mitkNavigationDataSetReaderWriterTest.cpp

mitkNavigationDataTest.cpp

IGTUI/

Qmitk/

QmitkTrackingDeviceConfigurationWidget.cpp

QmitkTrackingDeviceConfigurationWidgetControls.ui

QtWidgets/

QmitkIOUtil.cpp

O3: MITK Reviewer Group II

QtWidgetsExt/

QmitkPointListModel.cpp

O3: MITK Reviewer Group II

SegmentationUI/

Qmitk/

QmitkOtsuTool3DGUI.cpp

mitkCreateDistanceImageFromSurfaceFilter.cpp

SurfaceInterpolation/

mitkSurfaceInterpolationController.cpp

ToFUI/

Qmitk/

QmitkToFRecorderWidget.cpp

US/

Testing/

mitkUSDeviceTest.cpp

USHardwareTelemed/

mitkUSTelemedDevice.h

USModel/

mitkUSDevice.h

USNavigation/

mitkUSCombinedModality.cpp

USUI/

Qmitk/

QmitkUSControlsBModeWidget.ui

resources/

USUI.qrc

ultrasound01-probe-300ppi-deactivated.png

ultrasound01-probe-300ppi.png

ultrasound01-probe-72ppi-deactivated.png

ultrasound02-scan-300ppi-deactivated.png

ultrasound02-scan-300ppi.png

ultrasound02-scan-72ppi-deactivated.png

ultrasound03-targeting-300ppi-deactivated.png

ultrasound03-targeting-300ppi.png

ultrasound03-targeting-72ppi-deactivated.png

ultrasound04-warning-300ppi-deactivated.png

ultrasound04-warning-300ppi.png

ultrasound04-warning-72ppi-deactivated.png

ultrasound05-criticalStructures-300ppi-deactivated.png

ultrasound05-criticalStructures-300ppi.png

ultrasound05-criticalStructures-72ppi-deactivated.png

ultrasound06-criticalScan-300ppi-deactivated.png

ultrasound06-criticalScan-300ppi.png

ultrasound06-criticalScan-72ppi-deactivated.png

Plugins/

org.mitk.gui.qt.diffusionimaging/

documentation/

UserManual/

Connectomics/

ConnectomicsManual.dox

QmitkRandomParcellationIcon.png

DataImport

QmitkDiffusionImagingDataImportPage.dox

	DataImport/

dicom1.png

fslsave.png

FiberTracking

DirectionExtractionFib.png

DirectionExtractionPeaks.png

streamlinetrackingview.png

	FiberTracking/

Fiberfox-Fiducial.png

Fiberfox.png

FiberfoxExamples.png

QmitkFiberExtractionViewUserManual.dox

QmitkFiberProcessingViewUserManual.dox

QmitkFiberfoxViewUserManual.dox

QmitkFieldmapGeneratorViewUserManual.dox

QmitkGibbsTrackingViewUserManual.dox

QmitkStochasticTrackingViewUserManual.dox

QmitkStreamlineTrackingViewUserManual.dox

fieldmapGenerator.png

gibbstrackingview.png

gibbstrackingviewadvanced.png

stochastictrackingview.png

Fiberfox-Fiducial.png

QmitkDiffusionImagingPreprocessingPage.dox

QmitkDiffusionImagingReconstruction.dox

QmitkDiffusionImagingRegistration.dox

QmitkDiffusionImagingVisualization.dox

	Preproc_Recons/

GaussianFilter.png

NLM.png

QmitkDenoisingViewUserManual.dox

QmitkOdfDetailsViewUserManual.dox

QmitkOdfMaximaExtractionViewUserManual.dox

registration_basic.png

registration_batch.png

QmitkDenoisingViewUserManual.dox

QmitkDiffusionImagingPortalPage.dox

QmitkDiffusionImagingUserManual.dox

QmitkFiberExtractionViewUserManual.dox

QmitkFiberProcessingViewUserManual.dox

QmitkFiberfoxViewUserManual.dox

QmitkFieldmapGeneratorViewUserManual.dox

QmitkGibbsTrackingViewUserManual.dox

QmitkOdfDetailsViewUserManual.dox

QmitkOdfMaximaExtractionViewUserManual.dox

QmitkPartialVolumeAnalysisViewManual.dox

QmitkStochasticTrackingViewUserManual.dox

QmitkStreamlineTrackingViewUserManual.dox

QmitkTbssViewUserManual.dox

QmitkUserIVIMViewManual.dox

Quantification

QmitkDiffusionImagingQuantificationPage.dox

	Quantification/

QmitkPartialVolumeAnalysisViewManual.dox

QmitkTbssViewUserManual.dox

QmitkUserIVIMViewManual.dox

fieldmapGenerator.png

fslimport.png

fslsave.png

gibbstrackingview.png

gibbstrackingviewadvanced.png

registration_basic.png

registration_batch.png

residuals.png

segmentationview.png

stochastictrackingview.png

streamlinetrackingview.png

sw_phantom_crossing_qballs.png

src/

internal/

QmitkDiffusionRegistrationView.cpp

QmitkFiberExtractionView.cpp

QmitkFiberProcessingView.cpp

QmitkFiberProcessingViewControls.ui

QmitkFiberfoxView.cpp

QmitkFiberfoxViewControls.ui

QmitkGibbsTrackingViewControls.ui

QmitkStreamlineTrackingView.cpp

QmitkStreamlineTrackingViewControls.ui

org.mitk.gui.qt.igtexamples/

documentation/

UserManual/

QmitkIGTExamples.dox

QmitkIGTTtrackingLab.dox

org.mitk.gui.qt.igttracking/

src/

internal/

QmitkMITKIGTTrackingToolboxView.cpp

QmitkMITKIGTTrackingToolboxView.h

QmitkMITKIGTTrackingToolboxViewControls.ui

org.mitk.gui.qt.measurementtoolbox/

src/

internal/

QmitkImageStatisticsViewControls.ui

QmitkSegmentationView.cpp

org.mitk.gui.qt.segmentation/

src/

internal/

UltrasoundSupportControls.ui

org.mitk.gui.qt.ultrasound/

resources/

icon.xpm

src/

internal/

UltrasoundSupport.cpp

UltrasoundSupport.h

rMITK9d587edcfd81

Applications/Diffusion/CMakeLists.txt

Applications/PluginGenerator/CMakeLists.txt

Applications/PluginGenerator/PluginGenerator.cpp

Applications/PluginGenerator/PluginTemplate/CMakeLists.txt

CMake/mitkBuildConfigurationDefault.cmake

CMake/mitkBuildConfigurationmitkDiffusion.cmake

CMake/mitkFunctionEnableBuildConfiguration.cmake

CMakeExternals/Eigen.cmake

CMakeExternals/MITKData.cmake

CMakeExternals/PatchVTK.cmake

CMakeLists.txt

Core/Code/Common/mitkCoreObjectFactory.cpp

Core/Code/Common/mitkCoreObjectFactory.h

Core/Code/DataManagement/mitkImage.cpp

Core/Code/IO/mitkCustomMimeType.cpp

Core/Code/Internal/mitkCoreActivator.cpp

Core/Code/Rendering/mitkPointSetGLMapper2D.cpp

Core/Code/Rendering/mitkPointSetVtkMapper2D.cpp

Core/Code/Testing/mitkImageDimensionConverterTest.cpp

Core/Documentation/Doxygen/Concepts/ReaderWriterPage.md

Documentation/Doxygen/UserManual/MITKPluginManualsList.dox

Modules/DiffusionImaging/DiffusionCore/Algorithms/Reconstruction/itkOrientationDistributionFunction.txx

Modules/DiffusionImaging/DiffusionCore/Algorithms/Reconstruction/mitkTeemDiffusionTensor3DReconstructionImageFilter.cpp

Modules/DiffusionImaging/DiffusionCore/IODataStructures/DiffusionWeightedImages/mitkNrrdDiffusionImageWriter.cpp

Modules/DiffusionImaging/DiffusionCore/IODataStructures/DiffusionWeightedImages/mitkNrrdDiffusionImageWriter.h

Modules/DiffusionImaging/DiffusionCore/Rendering/vtkThickPlane.cxx

Modules/DiffusionImaging/DiffusionCore/Testing/files.cmake

Modules/DiffusionImaging/DiffusionCore/Testing/mitkB0ExtractionToSeparateImagesFilterTest.cpp

Modules/DiffusionImaging/DiffusionCore/Testing/mitkConvertDWITypeTest.cpp

Modules/DiffusionImaging/DiffusionCore/Testing/mitkDiffusionDICOMFileReaderTest.cpp

Modules/DiffusionImaging/DiffusionCore/Testing/mitkExtractSingleShellTest.cpp

Modules/DiffusionImaging/DiffusionCore/Testing/mitkFactoryRegistrationTest.cpp

Modules/DiffusionImaging/DiffusionCore/files.cmake

Modules/DiffusionImaging/DiffusionIO/files.cmake

Modules/DiffusionImaging/DiffusionIO/mitkConnectomicsNetworkIOFactory.cpp

Modules/DiffusionImaging/DiffusionIO/mitkConnectomicsNetworkIOFactory.h

Modules/DiffusionImaging/DiffusionIO/mitkConnectomicsNetworkReader.cpp

Modules/DiffusionImaging/DiffusionIO/mitkConnectomicsNetworkReader.h

Modules/DiffusionImaging/DiffusionIO/mitkConnectomicsNetworkSerializer.cpp

Modules/DiffusionImaging/DiffusionIO/mitkConnectomicsNetworkWriter.cpp

Modules/DiffusionImaging/DiffusionIO/mitkConnectomicsNetworkWriter.h

Modules/DiffusionImaging/DiffusionIO/mitkConnectomicsNetworkWriterFactory.cpp

Modules/DiffusionImaging/DiffusionIO/mitkConnectomicsNetworkWriterFactory.h

Modules/DiffusionImaging/DiffusionIO/mitkConnectomicsObjectFactory.cpp

Modules/DiffusionImaging/DiffusionIO/mitkDiffusionCoreObjectFactory.cpp

Modules/DiffusionImaging/DiffusionIO/mitkDiffusionCoreObjectFactory.h

Modules/DiffusionImaging/DiffusionIO/mitkDiffusionIOMimeTypes.cpp

Modules/DiffusionImaging/DiffusionIO/mitkDiffusionIOMimeTypes.h

Modules/DiffusionImaging/DiffusionIO/mitkDiffusionImageSerializer.cpp

Modules/DiffusionImaging/DiffusionIO/mitkDiffusionModuleActivator.cpp

Modules/DiffusionImaging/DiffusionIO/mitkFiberBundleXReader.cpp

Modules/DiffusionImaging/DiffusionIO/mitkFiberBundleXReader.h

Modules/DiffusionImaging/DiffusionIO/mitkFiberBundleXSerializer.cpp

Modules/DiffusionImaging/DiffusionIO/mitkFiberBundleXSerializer.h

Modules/DiffusionImaging/DiffusionIO/mitkFiberBundleXWriter.cpp

Modules/DiffusionImaging/DiffusionIO/mitkFiberBundleXWriter.h

Modules/DiffusionImaging/DiffusionIO/mitkFiberTrackingObjectFactory.cpp

Modules/DiffusionImaging/DiffusionIO/mitkFiberTrackingObjectFactory.h

Modules/DiffusionImaging/DiffusionIO/mitkNrrdDiffusionImageIOFactory.cpp

Modules/DiffusionImaging/DiffusionIO/mitkNrrdDiffusionImageIOFactory.h

Modules/DiffusionImaging/DiffusionIO/mitkNrrdDiffusionImageReader.cpp

Modules/DiffusionImaging/DiffusionIO/mitkNrrdDiffusionImageReader.h

Modules/DiffusionImaging/DiffusionIO/mitkNrrdDiffusionImageWriter.cpp

Modules/DiffusionImaging/DiffusionIO/mitkNrrdDiffusionImageWriter.h

Modules/DiffusionImaging/DiffusionIO/mitkNrrdDiffusionImageWriterFactory.cpp

Modules/DiffusionImaging/DiffusionIO/mitkNrrdDiffusionImageWriterFactory.h

Modules/DiffusionImaging/DiffusionIO/mitkNrrdQBallImageIOFactory.cpp

Modules/DiffusionImaging/DiffusionIO/mitkNrrdQBallImageIOFactory.h

Modules/DiffusionImaging/DiffusionIO/mitkNrrdQBallImageReader.cpp

Modules/DiffusionImaging/DiffusionIO/mitkNrrdQBallImageReader.h

Modules/DiffusionImaging/DiffusionIO/mitkNrrdQBallImageWriter.cpp

Modules/DiffusionImaging/DiffusionIO/mitkNrrdQBallImageWriter.h

Modules/DiffusionImaging/DiffusionIO/mitkNrrdQBallImageWriterFactory.cpp

Modules/DiffusionImaging/DiffusionIO/mitkNrrdQBallImageWriterFactory.h

Modules/DiffusionImaging/DiffusionIO/mitkNrrdTensorImageIOFactory.cpp

Modules/DiffusionImaging/DiffusionIO/mitkNrrdTensorImageIOFactory.h

Modules/DiffusionImaging/DiffusionIO/mitkNrrdTensorImageReader.cpp

Modules/DiffusionImaging/DiffusionIO/mitkNrrdTensorImageReader.h

Modules/DiffusionImaging/DiffusionIO/mitkNrrdTensorImageWriter.cpp

Modules/DiffusionImaging/DiffusionIO/mitkNrrdTensorImageWriter.h

Modules/DiffusionImaging/DiffusionIO/mitkNrrdTensorImageWriterFactory.cpp

Modules/DiffusionImaging/DiffusionIO/mitkNrrdTensorImageWriterFactory.h

Modules/DiffusionImaging/DiffusionIO/mitkQBallImageSerializer.cpp

Modules/DiffusionImaging/DiffusionIO/mitkTensorImageSerializer.cpp

Modules/DiffusionImaging/FiberTracking/Algorithms/itkFibersFromPlanarFiguresFilter.cpp

Modules/DiffusionImaging/FiberTracking/Algorithms/itkTractDensityImageFilter.cpp

Modules/DiffusionImaging/FiberTracking/Algorithms/itkTractsToDWIImageFilter.cpp

Modules/DiffusionImaging/FiberTracking/Algorithms/itkTractsToRgbaImageFilter.cpp

Modules/DiffusionImaging/FiberTracking/Algorithms/itkTractsToVectorImageFilter.cpp

Modules/DiffusionImaging/FiberTracking/IODataStructures/FiberBundleX/mitkFiberBundleX.cpp

Modules/DiffusionImaging/FiberTracking/IODataStructures/FiberBundleX/mitkFiberBundleX.h

Modules/DiffusionImaging/FiberTracking/IODataStructures/FiberBundleX/mitkFiberBundleXReader.cpp

Modules/DiffusionImaging/FiberTracking/IODataStructures/FiberBundleX/mitkFiberBundleXReader.h

Modules/DiffusionImaging/FiberTracking/IODataStructures/FiberBundleX/mitkFiberBundleXSerializer.cpp

Modules/DiffusionImaging/FiberTracking/IODataStructures/FiberBundleX/mitkFiberBundleXSerializer.h

Modules/DiffusionImaging/FiberTracking/IODataStructures/FiberBundleX/mitkFiberBundleXWriter.cpp

Modules/DiffusionImaging/FiberTracking/IODataStructures/FiberBundleX/mitkFiberBundleXWriter.h

Modules/DiffusionImaging/FiberTracking/Testing/mitkFiberBundleXReaderWriterTest.cpp

Modules/DiffusionImaging/FiberTracking/Testing/mitkFiberExtractionTest.cpp

Modules/DiffusionImaging/FiberTracking/Testing/mitkFiberTransformationTest.cpp

Modules/DiffusionImaging/FiberTracking/Testing/mitkFiberfoxAddArtifactsToDwiTest.cpp

Modules/DiffusionImaging/FiberTracking/Testing/mitkFiberfoxSignalGenerationTest.cpp

Modules/DiffusionImaging/FiberTracking/Testing/mitkLocalFiberPlausibilityTest.cpp

Modules/DiffusionImaging/FiberTracking/Testing/mitkPeakExtractionTest.cpp

Modules/DiffusionImaging/FiberTracking/Testing/mitkStreamlineTrackingTest.cpp

Modules/DiffusionImaging/FiberTracking/files.cmake

Modules/DiffusionImaging/FiberTracking/mitkFiberTrackingModuleActivator.cpp

Modules/DiffusionImaging/MiniApps/BatchedFolderRegistration.cpp

Modules/DiffusionImaging/MiniApps/CopyGeometry.cpp

Modules/DiffusionImaging/MiniApps/DICOMLoader.cpp

Modules/DiffusionImaging/MiniApps/Documentation/DiffusionMiniApps.dox

Modules/DiffusionImaging/MiniApps/DwiDenoising.cpp

Modules/DiffusionImaging/MiniApps/FiberDirectionExtraction.cpp

Modules/DiffusionImaging/MiniApps/FiberExtraction.cpp

Modules/DiffusionImaging/MiniApps/FiberProcessing.cpp

Modules/DiffusionImaging/MiniApps/Fiberfox.cpp

Modules/DiffusionImaging/MiniApps/FileFormatConverter.cpp

Modules/DiffusionImaging/MiniApps/GibbsTracking.cpp

Modules/DiffusionImaging/MiniApps/ImageResampler.cpp

Modules/DiffusionImaging/MiniApps/LocalDirectionalFiberPlausibility.cpp

Modules/DiffusionImaging/MiniApps/MultishellMethods.cpp

Modules/DiffusionImaging/MiniApps/NetworkCreation.cpp

Modules/DiffusionImaging/MiniApps/NetworkStatistics.cpp

Modules/DiffusionImaging/MiniApps/PeakExtraction.cpp

Modules/DiffusionImaging/MiniApps/StreamlineTracking.cpp

Modules/DiffusionImaging/MiniApps/TractometerMetrics.cpp

Modules/IGT/DataManagement/mitkNavigationData.cpp

Modules/IGT/DataManagement/mitkNavigationData.h

Modules/IGT/IO/mitkNavigationDataReaderCSV.cpp

Modules/IGT/IO/mitkNavigationDataReaderCSV.h

Modules/IGT/Testing/files.cmake

Modules/IGT/Testing/mitkNavigationDataSetReaderWriterCSVTest.cpp

Modules/IGT/Testing/mitkNavigationDataSetReaderWriterTest.cpp

Modules/IGT/Testing/mitkNavigationDataSetReaderWriterXMLTest.cpp

Modules/IGT/Testing/mitkNavigationDataTest.cpp

Modules/IGTUI/Qmitk/QmitkTrackingDeviceConfigurationWidget.cpp

Modules/IGTUI/Qmitk/QmitkTrackingDeviceConfigurationWidgetControls.ui

Modules/QtWidgets/QmitkIOUtil.cpp

Modules/QtWidgetsExt/QmitkPointListModel.cpp

Modules/SegmentationUI/Qmitk/QmitkOtsuTool3DGUI.cpp

Modules/SurfaceInterpolation/mitkCreateDistanceImageFromSurfaceFilter.cpp

Modules/SurfaceInterpolation/mitkSurfaceInterpolationController.cpp

Modules/ToFUI/Qmitk/QmitkToFRecorderWidget.cpp

Modules/US/Testing/mitkUSDeviceTest.cpp

Modules/US/USHardwareTelemed/mitkUSTelemedDevice.h

Modules/US/USModel/mitkUSDevice.h

Modules/US/USNavigation/mitkUSCombinedModality.cpp

Modules/USUI/Qmitk/QmitkUSControlsBModeWidget.ui

Modules/USUI/resources/USUI.qrc

Modules/USUI/resources/ultrasound01-probe-300ppi-deactivated.png

Modules/USUI/resources/ultrasound01-probe-300ppi.png

Modules/USUI/resources/ultrasound01-probe-72ppi-deactivated.png

Modules/USUI/resources/ultrasound02-scan-300ppi-deactivated.png

Modules/USUI/resources/ultrasound02-scan-300ppi.png

Modules/USUI/resources/ultrasound02-scan-72ppi-deactivated.png

Modules/USUI/resources/ultrasound03-targeting-300ppi-deactivated.png

Modules/USUI/resources/ultrasound03-targeting-300ppi.png

Modules/USUI/resources/ultrasound03-targeting-72ppi-deactivated.png

Modules/USUI/resources/ultrasound04-warning-300ppi-deactivated.png

Modules/USUI/resources/ultrasound04-warning-300ppi.png

Modules/USUI/resources/ultrasound04-warning-72ppi-deactivated.png

Modules/USUI/resources/ultrasound05-criticalStructures-300ppi-deactivated.png

Modules/USUI/resources/ultrasound05-criticalStructures-300ppi.png

Modules/USUI/resources/ultrasound05-criticalStructures-72ppi-deactivated.png

Modules/USUI/resources/ultrasound06-criticalScan-300ppi-deactivated.png

Modules/USUI/resources/ultrasound06-criticalScan-300ppi.png

Modules/USUI/resources/ultrasound06-criticalScan-72ppi-deactivated.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Connectomics/ConnectomicsManual.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Connectomics/QmitkRandomParcellationIcon.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/DataImport/QmitkDiffusionImagingDataImportPage.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/DataImport/dicom1.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/DataImport/fslsave.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/FiberTracking/DirectionExtractionFib.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/FiberTracking/DirectionExtractionPeaks.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/FiberTracking/Fiberfox-Fiducial.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/FiberTracking/Fiberfox.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/FiberTracking/FiberfoxExamples.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/FiberTracking/QmitkFiberExtractionViewUserManual.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/FiberTracking/QmitkFiberProcessingViewUserManual.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/FiberTracking/QmitkFiberfoxViewUserManual.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/FiberTracking/QmitkFieldmapGeneratorViewUserManual.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/FiberTracking/QmitkGibbsTrackingViewUserManual.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/FiberTracking/QmitkStochasticTrackingViewUserManual.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/FiberTracking/QmitkStreamlineTrackingViewUserManual.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/FiberTracking/fieldmapGenerator.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/FiberTracking/gibbstrackingview.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/FiberTracking/gibbstrackingviewadvanced.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/FiberTracking/stochastictrackingview.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/FiberTracking/streamlinetrackingview.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Fiberfox-Fiducial.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Fiberfox.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/FiberfoxExamples.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/GaussianFilter.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/NLM.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Preproc_Recons/GaussianFilter.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Preproc_Recons/NLM.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Preproc_Recons/QmitkDenoisingViewUserManual.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Preproc_Recons/QmitkDiffusionImagingPreprocessingPage.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Preproc_Recons/QmitkDiffusionImagingReconstruction.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Preproc_Recons/QmitkDiffusionImagingRegistration.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Preproc_Recons/QmitkDiffusionImagingVisualization.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Preproc_Recons/QmitkOdfDetailsViewUserManual.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Preproc_Recons/QmitkOdfMaximaExtractionViewUserManual.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Preproc_Recons/crossingmaxima.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Preproc_Recons/odfdetails.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Preproc_Recons/prepro1.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Preproc_Recons/qballs1.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Preproc_Recons/qballs2.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Preproc_Recons/qballs3.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Preproc_Recons/registration_basic.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Preproc_Recons/registration_batch.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Preproc_Recons/residuals.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Preproc_Recons/tensor1.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Preproc_Recons/tensor4.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Preproc_Recons/visualization3.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/QmitkDenoisingViewUserManual.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/QmitkDiffusionImagingPortalPage.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/QmitkDiffusionImagingUserManual.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/QmitkFiberExtractionViewUserManual.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/QmitkFiberProcessingViewUserManual.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/QmitkFiberfoxViewUserManual.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/QmitkFieldmapGeneratorViewUserManual.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/QmitkGibbsTrackingViewUserManual.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/QmitkOdfDetailsViewUserManual.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/QmitkOdfMaximaExtractionViewUserManual.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/QmitkPartialVolumeAnalysisViewManual.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/QmitkStochasticTrackingViewUserManual.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/QmitkStreamlineTrackingViewUserManual.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/QmitkTbssViewUserManual.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/QmitkUserIVIMViewManual.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Quantification/QmitkDiffusionImagingQuantificationPage.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Quantification/QmitkPartialVolumeAnalysisViewManual.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Quantification/QmitkTbssViewUserManual.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Quantification/QmitkUserIVIMViewManual.dox

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Quantification/fslimport.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Quantification/ivimview.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Quantification/profiles.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Quantification/pvanalysisview.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Quantification/quantification.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Quantification/tbss.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Quantification/tbssRoi.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/Quantification/trackingplot.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/crossingmaxima.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/dicom1.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/dicom2.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/fieldmapGenerator.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/fslimport.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/fslsave.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/gibbstrackingview.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/gibbstrackingviewadvanced.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/ivimview.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/odfdetails.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/overview.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/prepro1.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/profiles.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/pvanalysisview.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/qballs1.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/qballs2.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/qballs3.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/quantification.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/registration_basic.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/registration_batch.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/residuals.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/segmentationview.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/stochastictrackingview.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/streamlinetrackingview.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/sw_phantom_crossing_qballs.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/sw_phantom_rois.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/tbss.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/tbssRoi.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/tensor1.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/tensor4.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/trackingplot.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/visualization1.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/visualization2.png

Plugins/org.mitk.gui.qt.diffusionimaging/documentation/UserManual/visualization3.png

Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkDiffusionRegistrationView.cpp

Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkFiberExtractionView.cpp

Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkFiberProcessingView.cpp

Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkFiberProcessingViewControls.ui

Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkFiberfoxView.cpp

Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkFiberfoxViewControls.ui

Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkGibbsTrackingViewControls.ui

Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkStreamlineTrackingView.cpp

Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkStreamlineTrackingViewControls.ui

Plugins/org.mitk.gui.qt.igtexamples/documentation/UserManual/QmitkIGTExamples.dox

Plugins/org.mitk.gui.qt.igtexamples/documentation/UserManual/QmitkIGTTtrackingLab.dox

Plugins/org.mitk.gui.qt.igttracking/src/internal/QmitkMITKIGTTrackingToolboxView.cpp

Plugins/org.mitk.gui.qt.igttracking/src/internal/QmitkMITKIGTTrackingToolboxView.h

Plugins/org.mitk.gui.qt.igttracking/src/internal/QmitkMITKIGTTrackingToolboxViewControls.ui

Plugins/org.mitk.gui.qt.measurementtoolbox/src/internal/QmitkImageStatisticsViewControls.ui

Plugins/org.mitk.gui.qt.segmentation/src/internal/QmitkSegmentationView.cpp

Plugins/org.mitk.gui.qt.ultrasound/resources/icon.xpm

Plugins/org.mitk.gui.qt.ultrasound/src/internal/UltrasoundSupport.cpp

Plugins/org.mitk.gui.qt.ultrasound/src/internal/UltrasoundSupport.h