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Docker support for TotalSegmentator
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Totalsegmentator also comes with Docker container, which can invoked for inferencing by e.g.:
docker run --gpus 'device=0' --ipc=host -v /absolute/path/to/my/data/directory:/tmp wasserth/totalsegmentator_container:master TotalSegmentator -i /tmp/ct.nii.gz -o /tmp/segmentations

Implement the support for this call as well in MITK TotalSegmentator tool.

Event Timeline

a178n created this task.
a178n removed a178n as the assignee of this task.Mar 8 2023, 2:44 PM
a178n edited projects, added MITK; removed MITK (v2023.04).