Maniphest T29539

SAM Python wrapper for MITK
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	a178n
	Apr 25 2023, 2:22 PM

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Description

SAM inherently works only with 3 channel 2D images.
Medical 3D single channel images needs to be converted to 8bit, 3 channels images, per slice before SAM is invoked.

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		Status	Assigned	Task
		Resolved	kislinsk	T29191 [SEG] New segmentation tool candidates
		Resolved	kislinsk	T29524 SAM in MITK
		Resolved	a178n	T29539 SAM Python wrapper for MITK
		Resolved	kislinsk	T29648 SAM Python: Improve the wrapper to be used independently without MITK

Event Timeline

a178n triaged this task as Normal priority.Apr 25 2023, 2:22 PM

a178n created this task.

a178n edited projects, added MITK (v2023.04); removed MITK.

kislinsk edited projects, added MITK (v2023.12); removed MITK (v2023.04).May 17 2023, 2:55 PM

a178n renamed this task from Python wrapper for MITK to SAM Python wrapper for MITK.Jun 26 2023, 7:27 PM

a178n added a subtask: T29648: SAM Python: Improve the wrapper to be used independently without MITK.

Update: Wrapper exists now at https://github.com/ASHISRAVINDRAN/sam-mitk

a178n reopened this task as Open.Jul 4 2023, 11:32 PM

floca moved this task from Backlog to Cycle on the MITK (v2023.12) board.Oct 11 2023, 10:57 AM

kislinsk edited projects, added MITK (v2024.06); removed MITK (v2023.12).Dec 5 2023, 10:38 AM

kislinsk moved this task from Backlog to Cycle on the MITK (v2024.06) board.

a178n closed this task as Resolved.Mar 6 2024, 9:19 AM

kislinsk closed subtask T29648: SAM Python: Improve the wrapper to be used independently without MITK as Resolved.Sep 16 2024, 1:49 PM