This becomes more and more important (BAGI study)

[8c6003]: Merge branch 'bug-5544-MultiShellReconstruction'

Merged commits:

2012-05-23 17:57:58 Jonas Cordes [b503d9]
update copyright

2012-05-23 14:12:57 Jonas Cordes [f55a89]
adaption of SH-Functions handler
change namespace to 'mitk::sh'
adaption of sh-function calls

2012-05-22 15:00:28 Jonas Cordes [5ddb98]
Reconstruction-View adaption (1)

Conflicts:

Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkQBallReconstructionView.cpp
Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkQBallReconstructionView.h

2012-05-22 10:55:01 Jonas Cordes [f5628c]
Adaption of threshold-method

2012-05-14 17:31:48 Jonas Cordes [ee0b25]
clean up method declarations

2012-05-14 12:31:22 Jonas Cordes [82818a]
adapt view for new filter input

2012-05-12 20:12:30 Jonas Cordes [6a9d40]
code cleanup

2012-05-11 18:03:07 Jonas Cordes [c9c12b]
adaption test

2012-05-11 17:15:28 Jonas Cordes [fd1489]
Merge branch 'test' into bug-5544-MultiShellReconstruction

Conflicts:
Modules/DiffusionImaging/Reconstruction/itkDiffusionMultiShellQballReconstructionImageFilter.cpp

2012-05-11 17:08:14 Jonas Cordes [6ab2db]
Cleanup and comment code, set up normalize methode to get a ODF-Sum of 1

2012-05-10 18:43:59 Jonas Cordes [467fe5]
Opt. part(4), rm fill instructions

2012-05-10 12:58:26 Jonas Cordes [16eb3c]
change SH-Function to Boost-sh-function, Opt. part (3)

2012-05-10 02:11:32 Jonas Cordes [0167c2]
Opt. part (2)

2012-05-10 00:44:15 Jonas Cordes [9876a8]
Opt. part (1)

2012-05-08 16:57:47 Jonas Cordes [5bf031]
fix some projection problems in projection 1 and 2

2012-04-26 17:00:31 Jonas Cordes [913a99]
add some VNL Vector functions for elementwise interactions

2012-04-25 15:54:31 Jonas Cordes [1ab1f4]
float-problem fix

2012-04-24 17:28:17 Jonas Cordes [f030ea]
Merge branch 'master' into bug-5544-MultiShellReconstruction

Conflicts:
Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkQBallReconstructionView.cpp

2012-04-24 17:24:25 Jonas Cordes [f76202]
implemented new lambda calculation

2012-04-24 16:18:37 Jonas Cordes [ce180c]
implemented the projections of Aganj

2012-04-23 18:59:05 Jonas Cordes [8b271a]
fixt some vnl operator problems

2012-04-23 18:20:11 Jonas Cordes [23793f]
Add projection1 ( equal to proj2(E,d) in matlabCode)

2012-04-05 15:09:53 Jonas Cordes [6dd30e]
Test Analytical with constrains

2012-04-04 19:12:08 Jonas Cordes [ebe3f8]
constrains

2012-04-02 16:51:23 Jonas Cordes [f97b4f]
test analytical 3-Shell Reconstruction

2012-03-29 16:41:32 Jonas Cordes [7103ff]
Filter now use GradientIndexMap

2012-03-29 16:40:05 Jonas Cordes [8bad74]
now you can get a map of different bValues with a vector of graientindicies in mitkDiffusionImage

map< bvalue, vector< gradient-image-indicies > >

2012-03-27 17:40:47 Jonas Cordes [ed0804]
MultiShellQBallReconstructionFilter integrated in ReconstructionView part 2

2012-03-27 17:39:06 Jonas Cordes [23a48d]
add method : void GetBvalueList( std::vector<type> * vec )

2012-03-27 12:25:38 Jonas Cordes [0661c1]
comment MultiQShellFilter, integration in QBallReconstruction view part one

2012-03-26 13:48:02 Jonas Cordes [e8917b]
add missing vnl_matrix initialisations

2012-03-23 16:53:34 Jonas Cordes [69db84]
problems with NAN
do not know where it happens

2012-03-23 14:22:55 Jonas Cordes [13efce]
Running version of ODF-Reconstruction, comment out debug-output

2012-03-22 17:18:18 Jonas Cordes [7cd5d7]
add print messages for debugging

2012-03-21 14:49:00 Jonas Cordes [a8ad38]
add FRT and SHBasis reconstruction method, Refactor reconstructionmatrix calculation

2012-03-19 16:39:34 Jonas Cordes [829059]
add method: ComputeReconstructionMatrix & GenerateThreadedData
for QBAR-SolidAngle

2012-03-16 17:39:41 Jonas Cordes [44facd]
add MultiShell QBall Reconstruction Image Filter

2012-03-16 12:58:13 Jonas Cordes [2b80bc]
Add itkImageFilter for MultiShell-QBall-Reconstruction

2012-03-16 12:57:03 Jonas Cordes [999662]
Add Spherical-Harmonics FunctionHandler to Diffusion-Reconstruction Module

• AnalyticalDiffusionQBallRconstructionFilter use Spherical-Hamonics Handl

[edd3a2]: Merge branch 'bug-5544-MultiShellReconstruction'

Merged commits:

2012-05-24 14:08:08 Jonas Cordes [fdea53]
create mitkDiffusionFunctionCollection
delete mitkSphericalHarmonicsFunctions
delete VNLVectorFunctions
adapt files.cmake

[bd40e4]: Merge branch 'bug-5544-MultiShellReconstruction'

Merged commits:

2012-05-24 14:25:54 Jonas Cordes [dace60]
COMP: fix M_PI problems

[800ab3]: Merge branch 'bug-5544-MultiShellReconstruction'

Merged commits:

2012-05-24 14:33:28 Jonas Cordes [5bdd06]
COMP: add #endif

[f345b8]: Merge branch 'bug-5544-MultiShellReconstruction'

Merged commits:

2012-05-24 15:43:20 Jonas Cordes [5fe8bc]
Update Copyright Informations

[55282a]: Merge branch 'bug-5544-MultiShellReconstruction'

Merged commits:

2012-06-22 16:19:46 Jonas Cordes [2a6c35]
cleanup and update SingleShellReconstruction

2012-06-22 14:39:02 Jonas Cordes [f14087]
fix transformation factor

2012-06-21 15:55:53 Jonas Cordes [972591]
fix projection1 and lambda calculation

2012-06-20 14:16:13 Jonas Cordes [e95ad3]
verification (1)

2012-06-19 17:42:49 Jonas Cordes [f28ac2]
fix s0 normalization problem (2)

2012-06-18 18:50:15 Jonas Cordes [fae42d]
fix s0 normalization problem

2012-06-14 18:03:26 Jonas Cordes [2bae3b]
cleanup 2

2012-06-14 17:23:45 Jonas Cordes [bdb757]
cleanup

Filter now support multishell data with different gradient directions

2012-06-12 17:53:51 Jonas Cordes [f10f33]
interpolation SH-Basis added

2012-06-06 13:30:26 Jonas Cordes [c84cd6]
disabel q-ball mirroring

2012-06-05 14:31:57 Jonas Cordes [22354a]
add interpolation criteria, resturcture filter

2012-06-04 16:11:50 Jonas Cordes [f8d47c]
stpe to do : insert shell interpolation

2012-06-04 15:52:54 Jonas Cordes [7f61fa]
add interpolations decision

2012-06-04 11:42:52 Jonas Cordes [9cdcca]
refactor projection 2

2012-06-01 17:16:58 Jonas Cordes [16b8ef]
cleanup member relations

2012-06-01 16:55:18 Jonas Cordes [ff91af]
Merge branch 'bug-11979-qballreconstructionview-adaption' into bug-5544-MultiShellReconstruction

[713631]: Merge branch 'bug-5544-MultiShellReconstruction'

Merged commits:

2012-07-05 18:09:07 Jonas Cordes [4b8ebf]
adapt UI

2012-07-05 18:01:02 Jonas Cordes [9e11a7]
Output coeffs Image

[272b17]: Merge branch 'bug-5544-MultiShellReconstruction'

Merged commits:

2012-07-26 12:51:46 Jonas Cordes [f6da1a]
fix b0-average and interpolation bugs

[b5076b]: Merge branch 'bug-5544-MultishellReconstructionBugFixes'

Merged commits:

2012-08-03 15:53:18 Jonas Cordes [5b2a1c]
b0-threshold odf fix