Description

MITKDashboardScript.TEMPLATE.cmake

CMake/

MITKDashboardSetup.cmake

mitkSetupCPack.cmake

mitkSetupVariables.cmake

CMakeExternals/

CTK.cmake

VTK.cmake

Core/

Code/

mitkSliceNavigationController.cpp

Controllers/

CppMicroServices/

src/

service/

usServiceRegistration.cpp

usServiceRegistry.cpp

util/

usUtils.cpp

test/

usServiceRegistryTest.cpp

DataManagement/

mitkImage.cpp

mitkPointSet.cpp

Interactions/

StateMachine.xml

mitkDisplayVectorInteractor.cpp

mitkMouseModeSwitcher.cpp

mitkPositionTracker.cpp

Testing/

pipelining_example_ct.png

mitkImageTest.cpp

mitkImageWriterTest.cpp

Documentation/

Doxygen/

Concepts/

images/

mitkimagehierarchy.png

mitkimagememory.png

pipelining

pipelining_example_us.png

pipelining_hierarchy.png

pipelining_update.png

Documentation/

Doxygen/

DeveloperManual/

SupportedPlatforms.md

Modules/

DataTreeAndIterators.dia

DataTreeAndIterators.png

DataTreeNodeFactoryMechanism.png

DataTreeNodeFactoryMechanism.vsd

ModuleApplications.dox

ModuleApplicationsFunctionalities.dia

ModuleApplicationsFunctionalities.dox

ModuleApplicationsFunctionalities.png

ModuleApplicationsWidgets.dox

ModuleDataManagement.dox

ModuleDataTree.dox

ModuleDatamanagementIO.dox

PartsOfAFunctionaliy.jpg

PartsOfAFunctionaliy.xcf

SceneXML.png

XMLReaderOverview.png

XMLReaderOverview.vsd

XMLWriterOverview.png

XMLWriterOverview.vsd

UserManual/

ModuleList.dox

Modules/

DiffusionImaging/

	CMakeLists.txt
	CMakeLists.txt~

CMakeLists.txt~

IODataStructures/

ConnectomicsNetwork/

mitkConnectomicsNetworkReader.cpp

FiberBundleX/

mitkFiberBundleX.cpp

mitkFiberBundleX.h

Rendering/

mitkFiberBundleXMapper3D.cpp

Testing/

mitkFiberBundleXTest.cpp

Tractography/

GibbsTracking/

BuildFibres.cpp

EnergyComputerBase.cpp

EnergyComputer_connec.cpp

SphereInterpolator.cpp

auxilary_classes.cpp

mitkEnergyComputer.cpp

mitkEnergyComputer.h

mitkFiberBuilder.cpp

mitkFiberBuilder.h

mitkMetropolisHastingsSampler.cpp

mitkMetropolisHastingsSampler.h

mitkSphereInterpolator.h

pcRJMCMC.cpp

itkGibbsTrackingFilter.cpp

itkGibbsTrackingFilter.h

itkStreamlineTrackingFilter.cpp

itkStreamlineTrackingFilter.h

files.cmake

IGT/

Testing/

mitkTimeStampTest.cpp

MitkExt/

OpenCVVideoSupport/

Testing/

mitkImageToOpenCVImageFilterTest.cpp

files.cmake

mitkImageToOpenCVImageFilter.cpp

mitkImageToOpenCVImageFilter.h

Overlays/

QmitkCustomWidgetOverlay.cpp

QmitkCustomWidgetOverlay.h

PlanarFigure/

Interactions/

mitkPlanarFigureInteractor.cpp

QmitkAdaptiveRegionGrowingWidget.cpp

QmitkExt/

QmitkAboutDialog/

QmitkAboutDialogGUI.ui

QmitkAdaptiveRegionGrowingWidget.h

QmitkBinaryThresholdToolGUI.cpp

QmitkBinaryThresholdToolGUI.h

QmitkHistogramWidget.cpp

QmitkSlicesInterpolator.cpp

QmitkVtkHistogramWidget.cpp

QmitkVtkHistogramWidget.h

QmitkVtkLineProfileWidget.cpp

QmitkVtkLineProfileWidget.h

Segmentation/

Interactions/

mitkPaintbrushTool.cpp

Plugins/

org.mitk.gui.qt.application/

resources/

StateMachine.xml

	StateMachine.xml.orig
	StateMachine.xml

org.mitk.gui.qt.datamanager/

src/

QmitkDataManagerView.cpp

QmitkFiberProcessingView.cpp

org.mitk.gui.qt.diffusionimaging/

files.cmake

plugin.xml

src/

internal/

QmitkFiberProcessingView.h

QmitkFiberProcessingViewControls.ui

QmitkGibbsTrackingView.cpp

QmitkGibbsTrackingView.h

QmitkGibbsTrackingViewControls.ui

QmitkStreamlineTrackingView.cpp

QmitkStreamlineTrackingView.h

QmitkStreamlineTrackingViewControls.ui

mitkPluginActivator.cpp

org.mitk.gui.qt.diffusionimagingapp/

src/

internal/

Perspectives/

QmitkDIAppFiberTractographyPerspective.cpp

org.mitk.gui.qt.extapplication/

src/

internal/

QmitkExtDefaultPerspective.cpp

QmitkImageStatisticsView.cpp

org.mitk.gui.qt.measurementtoolbox/

src/

internal/

QmitkImageStatisticsViewControls.ui

QmitkMeasurementView.cpp

QmitkMeasurementView.h

org_mitk_gui_qt_segmentation.dox

org.mitk.gui.qt.segmentation/

documentation/

UserManual/

org_mitk_gui_qt_segmentation3DInterpolationWrongRight.png

org_mitk_gui_qt_segmentationIMGDataManagerContextMenu.png

org_mitk_gui_qt_segmentationIMGapplication.png

org_mitk_gui_qt_segmentationIMGcorrectionActions.png

org_mitk_gui_qt_segmentationIMGiconAddSubtract.png

org_mitk_gui_qt_segmentationIMGiconCorrection.png

org_mitk_gui_qt_segmentationIMGiconErase.png

org_mitk_gui_qt_segmentationIMGiconFill.png

org_mitk_gui_qt_segmentationIMGiconPaintWipe.png

org_mitk_gui_qt_segmentationIMGiconRegionGrowing.png

org_mitk_gui_qt_segmentationIMGleakage.png

segmentationFromSurfaceAfter.png

segmentationFromSurfaceBefore.png

QmitkCreatePolygonModelAction.cpp

src/

internal/

QmitkSegmentationPostProcessing.cpp

QmitkStatisticsAction.cpp

QmitkThresholdAction.cpp

QmitkThresholdAction.h

QmitkRegionGrowingView.cpp

regiongrowing/

QmitkRegionGrowingView.h

Utilities/

qtsingleapplication/

rMITK38f0ee2e5b98

BlueBerry/Bundles/org.blueberry.ui.qt/src/internal/berryQtWidgetsTweakletImpl.cpp

BlueBerry/CMakeLists.txt

CMake/MITKDashboardScript.TEMPLATE.cmake

CMake/MITKDashboardSetup.cmake

CMake/mitkSetupCPack.cmake

CMake/mitkSetupVariables.cmake

CMakeExternals/CTK.cmake

CMakeExternals/VTK.cmake

CMakeLists.txt

Core/Code/CMakeLists.txt

Core/Code/Controllers/mitkSliceNavigationController.cpp

Core/Code/CppMicroServices/src/service/usServiceRegistration.cpp

Core/Code/CppMicroServices/src/service/usServiceRegistry.cpp

Core/Code/CppMicroServices/src/util/usUtils.cpp

Core/Code/CppMicroServices/test/CMakeLists.txt

Core/Code/CppMicroServices/test/usServiceRegistryTest.cpp

Core/Code/DataManagement/mitkImage.cpp

Core/Code/DataManagement/mitkPointSet.cpp

Core/Code/Interactions/StateMachine.xml

Core/Code/Interactions/mitkDisplayVectorInteractor.cpp

Core/Code/Interactions/mitkMouseModeSwitcher.cpp

Core/Code/Interactions/mitkPositionTracker.cpp

Core/Code/Testing/CMakeLists.txt

Core/Code/Testing/mitkImageTest.cpp

Core/Code/Testing/mitkImageWriterTest.cpp

Core/Documentation/Doxygen/Concepts/CodingGeneral.dox

Core/Documentation/Doxygen/Concepts/Concepts.dox

Core/Documentation/Doxygen/Concepts/DataManagement.dox

Core/Documentation/Doxygen/Concepts/Exceptions.dox

Core/Documentation/Doxygen/Concepts/Interaction.dox

Core/Documentation/Doxygen/Concepts/Logging.dox

Core/Documentation/Doxygen/Concepts/MitkImage.dox

Core/Documentation/Doxygen/Concepts/Modularization.dox

Core/Documentation/Doxygen/Concepts/Overview.dox

Core/Documentation/Doxygen/Concepts/Pipelining.dox

Core/Documentation/Doxygen/Concepts/Properties.dox

Core/Documentation/Doxygen/Concepts/QVTKRendering.dox

Core/Documentation/Doxygen/Concepts/RenderingTests.dox

Core/Documentation/Doxygen/Concepts/TestsGeneral.dox

Core/Documentation/Doxygen/Concepts/images/introduction/MitkOverview.png

Core/Documentation/Doxygen/Concepts/images/mitkimage/mitkimagehierarchy.png

Core/Documentation/Doxygen/Concepts/images/mitkimage/mitkimagememory.png

Core/Documentation/Doxygen/Concepts/images/pipelining/pipelining_example_ct.png

Core/Documentation/Doxygen/Concepts/images/pipelining/pipelining_example_us.png

Core/Documentation/Doxygen/Concepts/images/pipelining/pipelining_hierarchy.png

Core/Documentation/Doxygen/Concepts/images/pipelining/pipelining_update.png

Documentation/Doxygen/DeveloperManual/SupportedPlatforms.md

Documentation/Doxygen/Modules/DataTreeAndIterators.dia

Documentation/Doxygen/Modules/DataTreeAndIterators.png

Documentation/Doxygen/Modules/DataTreeNodeFactoryMechanism.png

Documentation/Doxygen/Modules/DataTreeNodeFactoryMechanism.vsd

Documentation/Doxygen/Modules/ModuleApplications.dox

Documentation/Doxygen/Modules/ModuleApplicationsFunctionalities.dia

Documentation/Doxygen/Modules/ModuleApplicationsFunctionalities.dox

Documentation/Doxygen/Modules/ModuleApplicationsFunctionalities.png

Documentation/Doxygen/Modules/ModuleApplicationsWidgets.dox

Documentation/Doxygen/Modules/ModuleDataManagement.dox

Documentation/Doxygen/Modules/ModuleDataTree.dox

Documentation/Doxygen/Modules/ModuleDatamanagementIO.dox

Documentation/Doxygen/Modules/PartsOfAFunctionaliy.jpg

Documentation/Doxygen/Modules/PartsOfAFunctionaliy.xcf

Documentation/Doxygen/Modules/SceneXML.png

Documentation/Doxygen/Modules/XMLReaderOverview.png

Documentation/Doxygen/Modules/XMLReaderOverview.vsd

Documentation/Doxygen/Modules/XMLWriterOverview.png

Documentation/Doxygen/Modules/XMLWriterOverview.vsd

Documentation/Doxygen/UserManual/ModuleList.dox

Modules/DiffusionImaging/CMakeLists.txt

Modules/DiffusionImaging/CMakeLists.txt~

Modules/DiffusionImaging/IODataStructures/ConnectomicsNetwork/mitkConnectomicsNetworkReader.cpp

Modules/DiffusionImaging/IODataStructures/FiberBundleX/mitkFiberBundleX.cpp

Modules/DiffusionImaging/IODataStructures/FiberBundleX/mitkFiberBundleX.h

Modules/DiffusionImaging/Rendering/mitkFiberBundleXMapper3D.cpp

Modules/DiffusionImaging/Testing/mitkFiberBundleXTest.cpp

Modules/DiffusionImaging/Tractography/GibbsTracking/BuildFibres.cpp

Modules/DiffusionImaging/Tractography/GibbsTracking/EnergyComputerBase.cpp

Modules/DiffusionImaging/Tractography/GibbsTracking/EnergyComputer_connec.cpp

Modules/DiffusionImaging/Tractography/GibbsTracking/MersenneTwister.h

Modules/DiffusionImaging/Tractography/GibbsTracking/ParticleGrid.cpp

Modules/DiffusionImaging/Tractography/GibbsTracking/RJMCMCBase.cpp

Modules/DiffusionImaging/Tractography/GibbsTracking/RJMCMC_randshift.cpp

Modules/DiffusionImaging/Tractography/GibbsTracking/SphereInterpolator.cpp

Modules/DiffusionImaging/Tractography/GibbsTracking/auxilary_classes.cpp

Modules/DiffusionImaging/Tractography/GibbsTracking/mitkEnergyComputer.cpp

Modules/DiffusionImaging/Tractography/GibbsTracking/mitkEnergyComputer.h

Modules/DiffusionImaging/Tractography/GibbsTracking/mitkFiberBuilder.cpp

Modules/DiffusionImaging/Tractography/GibbsTracking/mitkFiberBuilder.h

Modules/DiffusionImaging/Tractography/GibbsTracking/mitkMetropolisHastingsSampler.cpp

Modules/DiffusionImaging/Tractography/GibbsTracking/mitkMetropolisHastingsSampler.h

Modules/DiffusionImaging/Tractography/GibbsTracking/mitkParticle.h

Modules/DiffusionImaging/Tractography/GibbsTracking/mitkParticleGrid.cpp

Modules/DiffusionImaging/Tractography/GibbsTracking/mitkParticleGrid.h

Modules/DiffusionImaging/Tractography/GibbsTracking/mitkSimpSamp.h

Modules/DiffusionImaging/Tractography/GibbsTracking/mitkSphereInterpolator.h

Modules/DiffusionImaging/Tractography/GibbsTracking/pcRJMCMC.cpp

Modules/DiffusionImaging/Tractography/itkGibbsTrackingFilter.cpp

Modules/DiffusionImaging/Tractography/itkGibbsTrackingFilter.h

Modules/DiffusionImaging/Tractography/itkStreamlineTrackingFilter.cpp

Modules/DiffusionImaging/Tractography/itkStreamlineTrackingFilter.h

Modules/DiffusionImaging/files.cmake

Modules/IGT/Testing/mitkTimeStampTest.cpp

Modules/MitkExt/CMakeLists.txt

Modules/OpenCVVideoSupport/Testing/CMakeLists.txt

Modules/OpenCVVideoSupport/Testing/files.cmake

Modules/OpenCVVideoSupport/Testing/mitkImageToOpenCVImageFilterTest.cpp

Modules/OpenCVVideoSupport/mitkImageToOpenCVImageFilter.cpp

Modules/OpenCVVideoSupport/mitkImageToOpenCVImageFilter.h

Modules/Overlays/QmitkCustomWidgetOverlay.cpp

Modules/Overlays/QmitkCustomWidgetOverlay.h

Modules/PlanarFigure/Interactions/mitkPlanarFigureInteractor.cpp

Modules/QmitkExt/QmitkAboutDialog/QmitkAboutDialogGUI.ui

Modules/QmitkExt/QmitkAdaptiveRegionGrowingWidget.cpp

Modules/QmitkExt/QmitkAdaptiveRegionGrowingWidget.h

Modules/QmitkExt/QmitkBinaryThresholdToolGUI.cpp

Modules/QmitkExt/QmitkBinaryThresholdToolGUI.h

Modules/QmitkExt/QmitkHistogramWidget.cpp

Modules/QmitkExt/QmitkSlicesInterpolator.cpp

Modules/QmitkExt/QmitkVtkHistogramWidget.cpp

Modules/QmitkExt/QmitkVtkHistogramWidget.h

Modules/QmitkExt/QmitkVtkLineProfileWidget.cpp

Modules/QmitkExt/QmitkVtkLineProfileWidget.h

Modules/Segmentation/Interactions/mitkPaintbrushTool.cpp

Plugins/org.mitk.gui.qt.application/resources/StateMachine.xml

Plugins/org.mitk.gui.qt.application/resources/StateMachine.xml.orig

Plugins/org.mitk.gui.qt.datamanager/src/QmitkDataManagerView.cpp

Plugins/org.mitk.gui.qt.diffusionimaging/files.cmake

Plugins/org.mitk.gui.qt.diffusionimaging/plugin.xml

Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkFiberProcessingView.cpp

Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkFiberProcessingView.h

Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkFiberProcessingViewControls.ui

Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkGibbsTrackingView.cpp

Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkGibbsTrackingView.h

Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkGibbsTrackingViewControls.ui

Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkStreamlineTrackingView.cpp

Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkStreamlineTrackingView.h

Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/QmitkStreamlineTrackingViewControls.ui

Plugins/org.mitk.gui.qt.diffusionimaging/src/internal/mitkPluginActivator.cpp

Plugins/org.mitk.gui.qt.diffusionimagingapp/src/internal/Perspectives/QmitkDIAppFiberTractographyPerspective.cpp

Plugins/org.mitk.gui.qt.extapplication/src/internal/QmitkExtDefaultPerspective.cpp

Plugins/org.mitk.gui.qt.measurementtoolbox/src/internal/QmitkImageStatisticsView.cpp

Plugins/org.mitk.gui.qt.measurementtoolbox/src/internal/QmitkImageStatisticsViewControls.ui

Plugins/org.mitk.gui.qt.measurementtoolbox/src/internal/QmitkMeasurementView.cpp

Plugins/org.mitk.gui.qt.measurementtoolbox/src/internal/QmitkMeasurementView.h

Plugins/org.mitk.gui.qt.segmentation/documentation/UserManual/org_mitk_gui_qt_segmentation.dox

Plugins/org.mitk.gui.qt.segmentation/documentation/UserManual/org_mitk_gui_qt_segmentation3DInterpolationWrongRight.png

Plugins/org.mitk.gui.qt.segmentation/documentation/UserManual/org_mitk_gui_qt_segmentationIMGDataManagerContextMenu.png

Plugins/org.mitk.gui.qt.segmentation/documentation/UserManual/org_mitk_gui_qt_segmentationIMGapplication.png

Plugins/org.mitk.gui.qt.segmentation/documentation/UserManual/org_mitk_gui_qt_segmentationIMGcorrectionActions.png

Plugins/org.mitk.gui.qt.segmentation/documentation/UserManual/org_mitk_gui_qt_segmentationIMGiconAddSubtract.png

Plugins/org.mitk.gui.qt.segmentation/documentation/UserManual/org_mitk_gui_qt_segmentationIMGiconCorrection.png

Plugins/org.mitk.gui.qt.segmentation/documentation/UserManual/org_mitk_gui_qt_segmentationIMGiconErase.png

Plugins/org.mitk.gui.qt.segmentation/documentation/UserManual/org_mitk_gui_qt_segmentationIMGiconFill.png

Plugins/org.mitk.gui.qt.segmentation/documentation/UserManual/org_mitk_gui_qt_segmentationIMGiconPaintWipe.png

Plugins/org.mitk.gui.qt.segmentation/documentation/UserManual/org_mitk_gui_qt_segmentationIMGiconRegionGrowing.png

Plugins/org.mitk.gui.qt.segmentation/documentation/UserManual/org_mitk_gui_qt_segmentationIMGleakage.png

Plugins/org.mitk.gui.qt.segmentation/documentation/UserManual/segmentationFromSurfaceAfter.png

Plugins/org.mitk.gui.qt.segmentation/documentation/UserManual/segmentationFromSurfaceBefore.png

Plugins/org.mitk.gui.qt.segmentation/src/internal/QmitkCreatePolygonModelAction.cpp

Plugins/org.mitk.gui.qt.segmentation/src/internal/QmitkSegmentationPostProcessing.cpp

Plugins/org.mitk.gui.qt.segmentation/src/internal/QmitkStatisticsAction.cpp

Plugins/org.mitk.gui.qt.segmentation/src/internal/QmitkThresholdAction.cpp

Plugins/org.mitk.gui.qt.segmentation/src/internal/QmitkThresholdAction.h

Plugins/org.mitk.gui.qt.segmentation/src/internal/regiongrowing/QmitkRegionGrowingView.cpp

Plugins/org.mitk.gui.qt.segmentation/src/internal/regiongrowing/QmitkRegionGrowingView.h

Utilities/CMakeLists.txt

Utilities/IIL4MITK

Utilities/IIL4MITK/CMakeLists.txt

Utilities/IIL4MITK/image.cpp

Utilities/IIL4MITK/image.h

Utilities/IIL4MITK/item.cpp

Utilities/IIL4MITK/item.h

Utilities/IIL4MITK/picimage.cpp

Utilities/IIL4MITK/picimage.h

Utilities/IIL4MITK/texture.cpp

Utilities/IIL4MITK/texture.h

Utilities/IIL4MITK/widget.h