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Oct 17 2023

kompan triaged T30227: Link error between plugins F1-Help files as Normal priority.
Oct 17 2023, 10:32 AM · MITK

Oct 12 2023

kompan committed rMITK112ad07eaa33: Remove all components of the Numeric Two Tissue Compartment Model from the… (authored by kompan).
Remove all components of the Numeric Two Tissue Compartment Model from the…
Oct 12 2023, 9:17 AM
kompan committed rMITKa10a1c236d4d: Remove numeric PK models. (authored by kompan).
Remove numeric PK models.
Oct 12 2023, 9:17 AM
kompan committed rMITKab20c8d460b2: Remove all components of the numeric 2CXM from the Pharmacokinetics module. (authored by kompan).
Remove all components of the numeric 2CXM from the Pharmacokinetics module.
Oct 12 2023, 9:17 AM
kompan committed rMITK2575839f4cb6: Remove 2CXM from Perfusion Data Simulation View. (authored by kompan).
Remove 2CXM from Perfusion Data Simulation View.
Oct 12 2023, 9:17 AM
kompan committed rMITK2cd392cafc70: Remove numeric Two Tissue Compartment Model from PET Dynamic View (authored by kompan).
Remove numeric Two Tissue Compartment Model from PET Dynamic View
Oct 12 2023, 9:17 AM
kompan committed rMITKfa633e22b90c: Remove numerical 2CXM from MR Perfusion View. (authored by kompan).
Remove numerical 2CXM from MR Perfusion View.
Oct 12 2023, 9:16 AM

Oct 11 2023

kompan claimed T29454: Clarify the versions/editions we publish as installer.
Oct 11 2023, 11:24 AM · MITK (v2024.06), Request for Discussion
kompan placed T29638: ModelFit Inspector crahes sometimes on data selection up for grabs.
Oct 11 2023, 11:17 AM · Next Milestone, MITK (v2024.06)
kompan claimed T30201: Provide checklist for ModelFit Inspector View.
Oct 11 2023, 11:13 AM · MITK (v2024.06)
kompan closed T30198: Update checklist for Perfusion Concentration Curve Converter as Resolved.
Oct 11 2023, 11:12 AM · MITK (v2023.12)
kompan closed T27813: Curve Description Parameters View progress bar 99% as Resolved.
Oct 11 2023, 9:17 AM · MITK (v2023.12)

Oct 6 2023

kompan committed rMITK5bc15d6dbdcf: Invoke progress event after member variable m_progress has been updated. (authored by kompan).
Invoke progress event after member variable m_progress has been updated.
Oct 6 2023, 7:32 AM
kompan committed rMITK4218f3bb744d: Invoke progress event after member variable m_progress has been updated. (authored by kompan).
Invoke progress event after member variable m_progress has been updated.
Oct 6 2023, 7:32 AM

Sep 26 2023

kompan added a comment to T27813: Curve Description Parameters View progress bar 99%.

In fact, this problem occurs not just for the progress bar, but the progress itself, e.g. also in the info box 1 is currently never reached even if the descriptive parameter calculation process is finished. The reason for this bug is that the progress is stored in a member variable which is updated after the progress event is invoked. Therefore, the progress variable is always lagging one update behind. This is fixed by changing the order of the called functions.
The fix is done for the descriptive parameter calculation, but also for the pixel and ROI-wise fitting.

Sep 26 2023, 9:19 AM · MITK (v2023.12)

Sep 20 2023

kompan removed a project from T30168: Fail to load NIFTI images due to error "itk only supports orthonormal direction cosines": Request for Discussion.

Discussion result: Use permissive mode always switched on. No preferences needed.

Sep 20 2023, 11:57 AM · MITK
kompan removed a project from T30186: PixelDumper view in MITK release: Request for Discussion.

Discussion result: Feature is useful but not as plugin on its own but instead as part of the statistics plugin (as an additional button like copy to clipboard).

Sep 20 2023, 11:37 AM · MITK
kompan removed a project from T30205: Check and update perfusion user manual: Request for Discussion.
Sep 20 2023, 11:29 AM · MITK (v2024.06)
kompan added a comment to T30205: Check and update perfusion user manual.

Integrate into F1 help. Make MITK ModelFit Webpage deprecated for manual section with link to doxygen documentation.

Sep 20 2023, 11:29 AM · MITK (v2024.06)
kompan moved T30205: Check and update perfusion user manual from Backlog to MITK Meeting on the Request for Discussion board.
Sep 20 2023, 11:25 AM · MITK (v2024.06)
kompan moved T30186: PixelDumper view in MITK release from Backlog to MITK Meeting on the Request for Discussion board.
Sep 20 2023, 11:25 AM · MITK
kompan moved T30168: Fail to load NIFTI images due to error "itk only supports orthonormal direction cosines" from Backlog to MITK Meeting on the Request for Discussion board.
Sep 20 2023, 11:24 AM · MITK
kompan removed a project from T30207: Add org.mitk.gui.qt.dicominspector to release: Request for Discussion.
Sep 20 2023, 11:19 AM · Request for Discussion, MITK (v2023.12)
kompan added a comment to T30207: Add org.mitk.gui.qt.dicominspector to release.

It is a useful feature and should be part of the next release.
Open to dos:

  • Checklist
  • check dependencies of the view. If the view does not have more dependencies then our property inspector should be merged.
Sep 20 2023, 11:18 AM · Request for Discussion, MITK (v2023.12)
kompan added a project to T30205: Check and update perfusion user manual: Request for Discussion.
Sep 20 2023, 9:56 AM · MITK (v2024.06)

Sep 15 2023

kompan closed T30199: Update checklist for Perfusion Curve Description Parameters as Resolved.
Sep 15 2023, 9:43 AM · MITK (v2023.12)
kompan removed a project from T27813: Curve Description Parameters View progress bar 99%: Cleared.
Sep 15 2023, 9:41 AM · MITK (v2023.12)

Sep 11 2023

kompan committed rMITK95e0615a3793: Change parameter naming in mitkPixelBasedParameterFitImageGeneratorTest. (authored by kompan).
Change parameter naming in mitkPixelBasedParameterFitImageGeneratorTest.
Sep 11 2023, 1:47 PM
kompan committed rMITKb824dbbec5ff: Change parameter naming in mitkROIBasedParameterFitImageGeneratorTest. (authored by kompan).
Change parameter naming in mitkROIBasedParameterFitImageGeneratorTest.
Sep 11 2023, 1:47 PM
kompan committed rMITKeeb86dcd4844: Change parameter naming in mitkPixelBasedParameterFitImageGeneratorTest. (authored by kompan).
Change parameter naming in mitkPixelBasedParameterFitImageGeneratorTest.
Sep 11 2023, 1:47 PM
kompan triaged T30206: Parameter naming in mitkPixelBasedParameterFitImageGeneratorTest and mitkROIBasedParameterFitImageGenerator as Normal priority.
Sep 11 2023, 11:05 AM · MITK (v2024.06)
kompan committed rMD3eca5ef9341b: Correct y-axis name of Exponential Saturation Model. (authored by kompan).
Correct y-axis name of Exponential Saturation Model.
Sep 11 2023, 10:45 AM
kompan committed rMDae0b52a4a89b: Correct function string for Exponential Decay Model. (authored by kompan).
Correct function string for Exponential Decay Model.
Sep 11 2023, 10:45 AM
kompan triaged T30205: Check and update perfusion user manual as Normal priority.
Sep 11 2023, 8:14 AM · MITK (v2024.06)
kompan triaged T30204: Improve visibility between help files for perfusion as Normal priority.
Sep 11 2023, 8:10 AM · Next Milestone, Request for Discussion, MITK (v2024.06)
kompan moved T30202: Provide checklist for ModelFit Generic Data Fitting from Backlog to Tests/Checklists on the MITK (v2023.12) board.
Sep 11 2023, 8:01 AM · MITK (v2024.06)
kompan moved T30203: Provide checklist for Fit Generator Demo from Backlog to Tests/Checklists on the MITK (v2023.12) board.
Sep 11 2023, 8:01 AM · MITK (v2024.06)
kompan triaged T30203: Provide checklist for Fit Generator Demo as Normal priority.
Sep 11 2023, 8:01 AM · MITK (v2024.06)
kompan triaged T30202: Provide checklist for ModelFit Generic Data Fitting as Normal priority.
Sep 11 2023, 8:00 AM · MITK (v2024.06)
kompan moved T30201: Provide checklist for ModelFit Inspector View from Backlog to Tests/Checklists on the MITK (v2023.12) board.
Sep 11 2023, 7:56 AM · MITK (v2024.06)
kompan triaged T30201: Provide checklist for ModelFit Inspector View as Normal priority.
Sep 11 2023, 7:48 AM · MITK (v2024.06)
kompan moved T30200: Update checklist for Perfusion DCE MRI Perfusion Datafit from Backlog to Tests/Checklists on the MITK (v2023.12) board.
Sep 11 2023, 7:46 AM · MITK (v2024.06)
kompan triaged T30200: Update checklist for Perfusion DCE MRI Perfusion Datafit as Normal priority.
Sep 11 2023, 7:46 AM · MITK (v2024.06)
kompan moved T30199: Update checklist for Perfusion Curve Description Parameters from Backlog to Tests/Checklists on the MITK (v2023.12) board.
Sep 11 2023, 7:45 AM · MITK (v2023.12)
kompan triaged T30199: Update checklist for Perfusion Curve Description Parameters as Normal priority.
Sep 11 2023, 7:45 AM · MITK (v2023.12)
kompan moved T30198: Update checklist for Perfusion Concentration Curve Converter from Backlog to Tests/Checklists on the MITK (v2023.12) board.
Sep 11 2023, 7:43 AM · MITK (v2023.12)
kompan triaged T30198: Update checklist for Perfusion Concentration Curve Converter as Normal priority.
Sep 11 2023, 7:43 AM · MITK (v2023.12)
kompan removed a project from T27350: Refactoring of T1 map calculation/selection for perfusion and CEST: Cleared.
Sep 11 2023, 7:39 AM · MITK (v2024.06)
kompan claimed T29638: ModelFit Inspector crahes sometimes on data selection.
Sep 11 2023, 7:07 AM · Next Milestone, MITK (v2024.06)
kompan edited projects for T29638: ModelFit Inspector crahes sometimes on data selection, added: MITK (v2023.12); removed MITK.
Sep 11 2023, 7:04 AM · Next Milestone, MITK (v2024.06)

Sep 8 2023

kompan committed rMITK25c62e83bd6f: Add unit tests for exponential saturation model. (authored by kompan).
Add unit tests for exponential saturation model.
Sep 8 2023, 9:07 AM
kompan committed rMITK1f439d767d43: Add unit tests for exponential saturation model. (authored by kompan).
Add unit tests for exponential saturation model.
Sep 8 2023, 9:07 AM
kompan committed rMDd50538d93140: Update PK unit tests according to changes in T29632. (authored by kompan).
Update PK unit tests according to changes in T29632.
Sep 8 2023, 8:06 AM
kompan committed rMD15b2bde56694: Update PK PET unit tests according to changes in T29632. (authored by kompan).
Update PK PET unit tests according to changes in T29632.
Sep 8 2023, 8:06 AM
kompan committed rMDf7815e51a8d1: Update ModelFit unit tests according to changes in T29632. (authored by kompan).
Update ModelFit unit tests according to changes in T29632.
Sep 8 2023, 7:54 AM
kompan committed rMITK62ce68f3a3ed: Rework of general and PK models regarding naming, units and model… (authored by kompan).
Rework of general and PK models regarding naming, units and model…
Sep 8 2023, 7:23 AM
kompan committed rMITK5d124b67c62c: Remove GetNumberOfDerivedParameters() from Extended One Tissue Compartment… (authored by kompan).
Remove GetNumberOfDerivedParameters() from Extended One Tissue Compartment…
Sep 8 2023, 7:23 AM
kompan committed rMITK9279201c13d9: Remove GetNumberOfDerivedParameters() from Two Tissue Compartment FDG Model. (authored by kompan).
Remove GetNumberOfDerivedParameters() from Two Tissue Compartment FDG Model.
Sep 8 2023, 7:23 AM
kompan committed rMITKaf48ae9d2397: Remove GetNumberOfDerivedParameters() from Two Tissue Compartment Model. (authored by kompan).
Remove GetNumberOfDerivedParameters() from Two Tissue Compartment Model.
Sep 8 2023, 7:23 AM
kompan committed rMITK6246c28e0ac5: Remove FUNCTION_STRING and NUMBER_OF_DERIVED_PARAMETERS from 2CXM. (authored by kompan).
Remove FUNCTION_STRING and NUMBER_OF_DERIVED_PARAMETERS from 2CXM.
Sep 8 2023, 7:23 AM
kompan committed rMITKa774835ad92e: Remove GetNumberOfDerivedParameters() from One Tissue Compartment Model. (authored by kompan).
Remove GetNumberOfDerivedParameters() from One Tissue Compartment Model.
Sep 8 2023, 7:23 AM
kompan committed rMITK9634752ede61: Remove function string from Standard Tofts Model. (authored by kompan).
Remove function string from Standard Tofts Model.
Sep 8 2023, 7:23 AM
kompan committed rMITK5b09efc324d0: Remove function string from Extended Tofts Model. (authored by kompan).
Remove function string from Extended Tofts Model.
Sep 8 2023, 7:23 AM
kompan committed rMITK1610d0267c89: Remove NUMBER_OF_DERIVED_PARAMETERS and GetNumberOfDerivedParameters() from… (authored by kompan).
Remove NUMBER_OF_DERIVED_PARAMETERS and GetNumberOfDerivedParameters() from…
Sep 8 2023, 7:23 AM
kompan committed rMITKd06ecadc692b: Remove NUMBER_OF_DERIVED_PARAMETERS and GetNumberOfDerivedParameters() from… (authored by kompan).
Remove NUMBER_OF_DERIVED_PARAMETERS and GetNumberOfDerivedParameters() from…
Sep 8 2023, 7:23 AM
kompan committed rMITKa1446a88cea4: Remove GetDerivedParameterNames() from Exponential Decay Offset Model. (authored by kompan).
Remove GetDerivedParameterNames() from Exponential Decay Offset Model.
Sep 8 2023, 7:23 AM
kompan committed rMITK60a12e64dff5: Remove GetDerivedParameterNames() from Exponential Saturation Model. (authored by kompan).
Remove GetDerivedParameterNames() from Exponential Saturation Model.
Sep 8 2023, 7:23 AM
kompan committed rMITK0cca42de7a98: Remove GetStaticParameterUnits() from Two Step Linear Model. (authored by kompan).
Remove GetStaticParameterUnits() from Two Step Linear Model.
Sep 8 2023, 7:23 AM
kompan committed rMITK236184e53b92: Remove GetDerivedParameterUnits() from Exponential Saturation Model. (authored by kompan).
Remove GetDerivedParameterUnits() from Exponential Saturation Model.
Sep 8 2023, 7:23 AM
kompan committed rMITKae380c4c9cc6: Remove GetDerivedParameterUnits() from Exponential Decay Offset Model. (authored by kompan).
Remove GetDerivedParameterUnits() from Exponential Decay Offset Model.
Sep 8 2023, 7:23 AM
kompan committed rMITK8d0366673790: Remove GetStaticParameterUnits() from Three Step Linear Model. (authored by kompan).
Remove GetStaticParameterUnits() from Three Step Linear Model.
Sep 8 2023, 7:23 AM
kompan committed rMITK2e43b447f596: Remove GetStaticParameterUnits() from Exponential Saturation Model. (authored by kompan).
Remove GetStaticParameterUnits() from Exponential Saturation Model.
Sep 8 2023, 7:23 AM
kompan committed rMITK69e78b1859c3: Remove GetStaticParameterUnits() from Linear Model. (authored by kompan).
Remove GetStaticParameterUnits() from Linear Model.
Sep 8 2023, 7:23 AM
kompan committed rMITKfd48f80c6cea: Remove GetStaticParameterUnits() from Exponential Decay Offset Model. (authored by kompan).
Remove GetStaticParameterUnits() from Exponential Decay Offset Model.
Sep 8 2023, 7:23 AM
kompan committed rMITKce1b4809d162: Remove GetStaticParameterUnits() from Exponential Decay Model. (authored by kompan).
Remove GetStaticParameterUnits() from Exponential Decay Model.
Sep 8 2023, 7:23 AM
kompan committed rMITK8aa020ca2e16: Remove unused variable. (authored by kompan).
Remove unused variable.
Sep 8 2023, 7:23 AM
kompan committed rMITKcda9ac0ba222: Rework Descriptive Pharmacokinetic Brix Model. (authored by kompan).
Rework Descriptive Pharmacokinetic Brix Model.
Sep 8 2023, 7:23 AM
kompan committed rMITK0fe6f771381f: Rework Two Tissue Compartment FDG Model. (authored by kompan).
Rework Two Tissue Compartment FDG Model.
Sep 8 2023, 7:23 AM
kompan committed rMITK85892c552182: Remove 2SL and 3SL model from Fit DCE documentation. (authored by kompan).
Remove 2SL and 3SL model from Fit DCE documentation.
Sep 8 2023, 7:23 AM
kompan committed rMITK50766039ad1b: Rework Extended One Tissue Compartment Model. (authored by kompan).
Rework Extended One Tissue Compartment Model.
Sep 8 2023, 7:23 AM
kompan committed rMITK0fc1f67630bb: Rework Two Tissue Compartment Model. (authored by kompan).
Rework Two Tissue Compartment Model.
Sep 8 2023, 7:23 AM
kompan committed rMITK378b0f8e29f7: Rework One Tissue Compartment Model. (authored by kompan).
Rework One Tissue Compartment Model.
Sep 8 2023, 7:23 AM
kompan committed rMITK7495e6a3d86c: Rework Two Compartment Exchange Model. (authored by kompan).
Rework Two Compartment Exchange Model.
Sep 8 2023, 7:23 AM
kompan committed rMITK8783a4829e61: Rework Extended Tofts Model. (authored by kompan).
Rework Extended Tofts Model.
Sep 8 2023, 7:23 AM
kompan committed rMITK264b58bf21a9: Rework Standard Tofts Model. (authored by kompan).
Rework Standard Tofts Model.
Sep 8 2023, 7:23 AM
kompan committed rMITK2d3ed650e4bd: Update model formnulas in generic fitting plugin F1 help. (authored by kompan).
Update model formnulas in generic fitting plugin F1 help.
Sep 8 2023, 7:23 AM
kompan committed rMITKbd7eb018be9a: Rework AIF model base. (authored by kompan).
Rework AIF model base.
Sep 8 2023, 7:23 AM
kompan committed rMITK11ede9c97214: Improve human readability of parameters in Exponential Saturation Model. (authored by kompan).
Improve human readability of parameters in Exponential Saturation Model.
Sep 8 2023, 7:23 AM
kompan committed rMITK3bbf345fb838: Correction of documentation in comment of Exponential Saturation Model. (authored by kompan).
Correction of documentation in comment of Exponential Saturation Model.
Sep 8 2023, 7:23 AM
kompan committed rMITK84fc69133427: Improve human readability of parameter in Exp Decay Offset Model. (authored by kompan).
Improve human readability of parameter in Exp Decay Offset Model.
Sep 8 2023, 7:23 AM
kompan committed rMITKd6848f394091: Correction of documentation in comments of Exponential Decay Offset Model. (authored by kompan).
Correction of documentation in comments of Exponential Decay Offset Model.
Sep 8 2023, 7:23 AM
kompan committed rMITK8d95bd73499f: Correction of documentation in comments of Exponential Decays Model. (authored by kompan).
Correction of documentation in comments of Exponential Decays Model.
Sep 8 2023, 7:23 AM
kompan committed rMITKb23464b3e614: Improve human readability of parameters for Linear Model. (authored by kompan).
Improve human readability of parameters for Linear Model.
Sep 8 2023, 7:23 AM
kompan committed rMITK441b873fa43d: Improve human readability of parameters for Exponential Decay Model. (authored by kompan).
Improve human readability of parameters for Exponential Decay Model.
Sep 8 2023, 7:23 AM
kompan committed rMITKa734a2604762: Improve human readability of parameters for Two Step Linear Model. (authored by kompan).
Improve human readability of parameters for Two Step Linear Model.
Sep 8 2023, 7:23 AM
kompan committed rMITK09e52e32ee5f: Move Three Step Linear Model to ModelFit and generic datafit view. (authored by kompan).
Move Three Step Linear Model to ModelFit and generic datafit view.
Sep 8 2023, 7:23 AM
kompan committed rMITKe75959248f40: Rework Three Step Linear Model. (authored by kompan).
Rework Three Step Linear Model.
Sep 8 2023, 7:23 AM
kompan committed rMITKad93e1643fd5: Improve human readability of parameter names for Three Step Linear Model. (authored by kompan).
Improve human readability of parameter names for Three Step Linear Model.
Sep 8 2023, 7:23 AM
kompan committed rMITKa236f9f2133a: Move Two Step Linear Model to ModelFit and generic data fit view. (authored by kompan).
Move Two Step Linear Model to ModelFit and generic data fit view.
Sep 8 2023, 7:23 AM
kompan committed rMITKccec37190a04: Rework Two Step Linear Model. (authored by kompan).
Rework Two Step Linear Model.
Sep 8 2023, 7:23 AM