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Nov 23 2023

a178n committed rMITKfc8b96111fc6: Convert IsImageAtTimeStepValid as free function (authored by a178n).
Convert IsImageAtTimeStepValid as free function
Nov 23 2023, 11:11 AM
a178n committed rMITK6feb99dd9e27: SAM: Bugfix for 2D images (authored by a178n).
SAM: Bugfix for 2D images
Nov 23 2023, 11:10 AM

Nov 22 2023

a178n added a project to T30268: [Checklist] Segmentation 3D Interpolation: Checklist.
Nov 22 2023, 10:43 AM · MITK (v2024.06), Checklist
a178n added a project to T30275: [Segmentation] 3D Interpolation Show-Position-Nodes not updating sometimes: Checklist.
Nov 22 2023, 10:43 AM · Checklist, MITK
a178n added a project to T30270: [Segmentation] Show Position Nodes in Interpolation not working for loaded mitk projects: Checklist.
Nov 22 2023, 10:43 AM · Checklist, MITK
a178n added a project to T30263: [Segmentation] SAM tool issue with single slice (2D): Checklist.
Nov 22 2023, 10:36 AM · Checklist, MITK (v2023.12)

Nov 21 2023

a178n added a comment to T30263: [Segmentation] SAM tool issue with single slice (2D).

Pushed new branch to rMITK MITK: feature/T30263-sam-2d-bugfix.

Nov 21 2023, 8:07 PM · Checklist, MITK (v2023.12)
a178n renamed T30263: [Segmentation] SAM tool issue with single slice (2D) from [Segmentation] SAM tool issue with single slice dicom to [Segmentation] SAM tool issue with single slice (2D).
Nov 21 2023, 8:05 PM · Checklist, MITK (v2023.12)
a178n renamed T30275: [Segmentation] 3D Interpolation Show-Position-Nodes not updating sometimes from [Segmentation] 3D Interpolation position nodes also includes unlabeled slices to [Segmentation] 3D Interpolation Show-Position-Nodes not updating sometimes.
Nov 21 2023, 11:39 AM · Checklist, MITK
a178n added a comment to T30256: TotalSeg: Add check for Python version.

Pushed new branch to rMITK MITK: feature/T30256-add-python-version-check.

Nov 21 2023, 6:03 AM · MITK (v2024.06)

Nov 20 2023

a178n created T30275: [Segmentation] 3D Interpolation Show-Position-Nodes not updating sometimes.
Nov 20 2023, 3:31 PM · Checklist, MITK
a178n renamed T30270: [Segmentation] Show Position Nodes in Interpolation not working for loaded mitk projects from [Segmentation] Show Position Nodes in not working for loaded mitk projects to [Segmentation] Show Position Nodes in Interpolation not working for loaded mitk projects.
Nov 20 2023, 1:23 PM · Checklist, MITK
a178n created T30270: [Segmentation] Show Position Nodes in Interpolation not working for loaded mitk projects.
Nov 20 2023, 1:16 PM · Checklist, MITK
a178n added a comment to T30268: [Checklist] Segmentation 3D Interpolation.

Whoever corrects these, please update the contour colours across the checklist for consistency.

Nov 20 2023, 12:58 PM · MITK (v2024.06), Checklist
a178n updated the task description for T30268: [Checklist] Segmentation 3D Interpolation.
Nov 20 2023, 12:53 PM · MITK (v2024.06), Checklist
a178n updated the task description for T30268: [Checklist] Segmentation 3D Interpolation.
Nov 20 2023, 12:53 PM · MITK (v2024.06), Checklist
a178n updated the task description for T30268: [Checklist] Segmentation 3D Interpolation.
Nov 20 2023, 11:29 AM · MITK (v2024.06), Checklist
a178n updated the task description for T30268: [Checklist] Segmentation 3D Interpolation.
Nov 20 2023, 11:26 AM · MITK (v2024.06), Checklist
a178n updated the task description for T30268: [Checklist] Segmentation 3D Interpolation.
Nov 20 2023, 11:26 AM · MITK (v2024.06), Checklist
a178n triaged T30268: [Checklist] Segmentation 3D Interpolation as Normal priority.
Nov 20 2023, 11:26 AM · MITK (v2024.06), Checklist
a178n added a parent task for T30263: [Segmentation] SAM tool issue with single slice (2D): T29524: SAM in MITK.
Nov 20 2023, 10:13 AM · Checklist, MITK (v2023.12)
a178n added a subtask for T29524: SAM in MITK: T30263: [Segmentation] SAM tool issue with single slice (2D).
Nov 20 2023, 10:13 AM · MITK
a178n created T30263: [Segmentation] SAM tool issue with single slice (2D).
Nov 20 2023, 10:12 AM · Checklist, MITK (v2023.12)
a178n triaged T30259: [Segmentation] Available models dropdown is empty in nnUNet tool as Normal priority.
Nov 20 2023, 9:05 AM · MITK
a178n renamed T30253: SAM tool: Installation could show error message for wrong python path from SAM tool: Installation can show error for wrong python path to SAM tool: Installation could show error message for wrong python path.
Nov 20 2023, 8:58 AM · MITK (v2024.06)
a178n closed T29644: Doxygen documentation for SAM, a subtask of T29524: SAM in MITK, as Resolved.
Nov 20 2023, 8:58 AM · MITK
a178n closed T29644: Doxygen documentation for SAM as Resolved.
Nov 20 2023, 8:58 AM · MITK (v2023.12)

Nov 17 2023

a178n updated the task description for T30256: TotalSeg: Add check for Python version.
Nov 17 2023, 12:03 PM · MITK (v2024.06)
a178n triaged T30256: TotalSeg: Add check for Python version as High priority.
Nov 17 2023, 11:49 AM · MITK (v2024.06)

Nov 16 2023

a178n added a comment to T30253: SAM tool: Installation could show error message for wrong python path.

Pushed new branch to rMITK MITK: feature/T30253-sam-message-update.

Nov 16 2023, 1:27 PM · MITK (v2024.06)
a178n updated the task description for T30253: SAM tool: Installation could show error message for wrong python path.
Nov 16 2023, 11:27 AM · MITK (v2024.06)
a178n triaged T30253: SAM tool: Installation could show error message for wrong python path as Normal priority.
Nov 16 2023, 11:25 AM · MITK (v2024.06)
a178n closed T29645: Test Plan for SAM, a subtask of T29524: SAM in MITK, as Resolved.
Nov 16 2023, 11:17 AM · MITK
a178n closed T29645: Test Plan for SAM as Resolved.
Nov 16 2023, 11:17 AM · MITK (v2023.12)

Nov 15 2023

a178n triaged T30252: [Segmentation] Deleting an empty group causes Workbench crash as Unbreak Now! priority.
Nov 15 2023, 5:12 PM · MITK
a178n added a comment to T30252: [Segmentation] Deleting an empty group causes Workbench crash.
Nov 15 2023, 4:36 PM · MITK
a178n created T30252: [Segmentation] Deleting an empty group causes Workbench crash.
Nov 15 2023, 4:34 PM · MITK

Nov 14 2023

a178n edited the content of 2023 Week 46 (Mid November).
Nov 14 2023, 3:46 PM
a178n edited the content of 2023 Week 46 (Mid November).
Nov 14 2023, 1:32 PM

Nov 13 2023

a178n triaged T30247: MONAILabel: Improve doxygen docstrings as Normal priority.
Nov 13 2023, 10:07 AM · MITK (v2024.06)
a178n edited projects for T30240: MonaiLabel: How to support more apps, added: MITK (v2023.12); removed Request for Discussion, MITK.
Nov 13 2023, 9:59 AM · MITK (v2024.06)

Nov 9 2023

a178n added a comment to T30240: MonaiLabel: How to support more apps.

New checkbox "Allow all models" added to Preferences. Changes included in D875

Nov 9 2023, 4:23 PM · MITK (v2024.06)
a178n added a revision to T30240: MonaiLabel: How to support more apps: Unknown Object (Differential Revision).
Nov 9 2023, 4:22 PM · MITK (v2024.06)

Nov 8 2023

a178n triaged T30242: [MONAILabel] Trouble activating SSL support in Httplib as Normal priority.
Nov 8 2023, 2:27 PM · MITK (v2024.06)
a178n committed rMITK1ee8b7dc19a1: Totalsegmentator version update & minor changes (authored by a178n).
Totalsegmentator version update & minor changes
Nov 8 2023, 2:00 PM
a178n committed rMITK88d9629de541: Totalsegmentator v2 version update (authored by a178n).
Totalsegmentator v2 version update
Nov 8 2023, 2:00 PM

Nov 7 2023

a178n triaged T30240: MonaiLabel: How to support more apps as Normal priority.
Nov 7 2023, 10:18 AM · MITK (v2024.06)

Oct 26 2023

a178n triaged T30232: MONAI Label: Level Window contrast effects as Normal priority.
Oct 26 2023, 9:47 PM · MITK (v2024.06)
a178n added a comment to T30231: Monailabel User documentation.

Pushed new branch to rMITK MITK: feature/T30231-monailabel-doku.

Oct 26 2023, 2:56 PM · MITK (v2024.06)
a178n triaged T30231: Monailabel User documentation as Normal priority.
Oct 26 2023, 2:54 PM · MITK (v2024.06)
a178n added a revision to T30151: MONAI Label tool support CLICK interaction patterns: Unknown Object (Differential Revision).
Oct 26 2023, 12:05 PM · MITK (v2024.06)
a178n added a revision to T29295: MONAI Label App as auto-segmentation tool in MITK: Unknown Object (Differential Revision).
Oct 26 2023, 12:05 PM · MITK (v2024.06)

Oct 23 2023

a178n triaged T30229: MONAI Label tool: Introduce time out parameter entry in Preferences as Normal priority.
Oct 23 2023, 6:22 PM · MITK (v2024.06), Request for Discussion
a178n added a subtask for T29192: [SEG] MONAI Label support in MITK Workbench: T29456: Datastore access facility in MONAILabel tool.
Oct 23 2023, 6:18 PM · MITK (v2024.06)
a178n removed a subtask for T29295: MONAI Label App as auto-segmentation tool in MITK: T29456: Datastore access facility in MONAILabel tool.
Oct 23 2023, 6:18 PM · MITK (v2024.06)
a178n edited parent tasks for T29456: Datastore access facility in MONAILabel tool, added: T29192: [SEG] MONAI Label support in MITK Workbench; removed: T29295: MONAI Label App as auto-segmentation tool in MITK.
Oct 23 2023, 6:18 PM · MITK
a178n removed a subtask for T29295: MONAI Label App as auto-segmentation tool in MITK: T30151: MONAI Label tool support CLICK interaction patterns.
Oct 23 2023, 6:16 PM · MITK (v2024.06)
a178n edited parent tasks for T30151: MONAI Label tool support CLICK interaction patterns, added: T29192: [SEG] MONAI Label support in MITK Workbench; removed: T29295: MONAI Label App as auto-segmentation tool in MITK.
Oct 23 2023, 6:16 PM · MITK (v2024.06)
a178n added a subtask for T29192: [SEG] MONAI Label support in MITK Workbench: T30151: MONAI Label tool support CLICK interaction patterns.
Oct 23 2023, 6:16 PM · MITK (v2024.06)
a178n renamed T30151: MONAI Label tool support CLICK interaction patterns from MONAI Label tool support other interaction patterns to MONAI Label tool support CLICK interaction patterns.
Oct 23 2023, 6:15 PM · MITK (v2024.06)

Oct 19 2023

a178n committed rMITK5cca58172e5d: TotalSegmentator v2 compatibility changes (authored by a178n).
TotalSegmentator v2 compatibility changes
Oct 19 2023, 5:39 PM
a178n committed rMITK586481d0ec30: Totalsegmentator documentation update for v2 (authored by a178n).
Totalsegmentator documentation update for v2
Oct 19 2023, 5:39 PM
a178n committed rMITK3c75a3fb1b19: Totalsegmentator install packages update for v2 (authored by a178n).
Totalsegmentator install packages update for v2
Oct 19 2023, 5:39 PM
a178n committed rMITK36f19e73bbfe: Totalsegmentator label list parsing update for v2 (authored by a178n).
Totalsegmentator label list parsing update for v2
Oct 19 2023, 5:39 PM
a178n committed rMITK8e3186f5f139: Adding progress bar to Totalsegmentator tool (authored by a178n).
Adding progress bar to Totalsegmentator tool
Oct 19 2023, 5:39 PM
a178n committed rMITK8de2fd4d9c1a: Totalsegmentator minor code update (authored by a178n).
Totalsegmentator minor code update
Oct 19 2023, 5:39 PM
a178n committed rMITKdbb118093395: TotalSegmentator v2 (authored by a178n).
TotalSegmentator v2
Oct 19 2023, 5:39 PM

Oct 18 2023

a178n closed T30220: SAM tool: Custom NRRD writer not working as expected in Ubuntu, a subtask of T29524: SAM in MITK, as Resolved.
Oct 18 2023, 9:45 AM · MITK
a178n closed T30220: SAM tool: Custom NRRD writer not working as expected in Ubuntu as Resolved.
Oct 18 2023, 9:45 AM · MITK (v2023.12)

Oct 13 2023

a178n committed rMITK41b69a893f04: SAM tool user documentation first draft (authored by a178n).
SAM tool user documentation first draft
Oct 13 2023, 4:57 PM
a178n committed rMITK12d5770edcc6: Update SAM tool documentation (authored by a178n).
Update SAM tool documentation
Oct 13 2023, 4:57 PM
a178n committed rMITK3b81c163a10b: Update SAM doku (authored by a178n).
Update SAM doku
Oct 13 2023, 4:57 PM
a178n committed rMITK48ce4c599ae2: Update SAM tool doku (authored by a178n).
Update SAM tool doku
Oct 13 2023, 4:57 PM
a178n committed rMITK7b4dd3a59fb9: SAM tool user documentation (authored by a178n).
SAM tool user documentation
Oct 13 2023, 4:57 PM
a178n committed rMITK2fa4cdc39820: SAM backend changes backup (authored by a178n).
SAM backend changes backup
Oct 13 2023, 3:42 PM
a178n committed rMITK3a66df9945a1: Segment Anything Tool initial commit (authored by a178n).
Segment Anything Tool initial commit
Oct 13 2023, 3:42 PM
a178n committed rMITKc2b3be9dd1be: Negative clicks Ahoy! (authored by a178n).
Negative clicks Ahoy!
Oct 13 2023, 3:42 PM
a178n committed rMITK64e4a8ca7634: SAM tool UI & backend code changes (authored by a178n).
SAM tool UI & backend code changes
Oct 13 2023, 3:42 PM
a178n committed rMITK0a67fe3839d8: Merge branch 'develop' into feature/T29540-sam-2d-tool (authored by a178n).
Merge branch 'develop' into feature/T29540-sam-2d-tool
Oct 13 2023, 3:42 PM
a178n committed rMITKd00fc49ec8cd: Adding checks to avoid clicks outside image (authored by a178n).
Adding checks to avoid clicks outside image
Oct 13 2023, 3:42 PM
a178n committed rMITKb2d37df9a7e2: code update with time measurement (authored by a178n).
code update with time measurement
Oct 13 2023, 3:42 PM
a178n committed rMITKdf6fef94a552: Merge branch 'develop' into feature/T29540-sam-2d-tool (authored by a178n).
Merge branch 'develop' into feature/T29540-sam-2d-tool
Oct 13 2023, 3:42 PM
a178n committed rMITKebb06baa6b5c: SAM tool with daemon working changes (authored by a178n).
SAM tool with daemon working changes
Oct 13 2023, 3:42 PM
a178n committed rMITKe4f53fdcc0c1: Merge branch 'master' into feature/T29604-sam-tool-2 (authored by a178n).
Merge branch 'master' into feature/T29604-sam-tool-2
Oct 13 2023, 3:42 PM
a178n committed rMITKbf99b967ae7a: SAM tool working changes (authored by a178n).
SAM tool working changes
Oct 13 2023, 3:42 PM
a178n committed rMITK4948dba75162: SAM installer working changes (authored by a178n).
SAM installer working changes
Oct 13 2023, 3:42 PM
a178n committed rMITKbdb8197e2a24: Remove Interactive vs Auto radiobutton selection (authored by a178n).
Remove Interactive vs Auto radiobutton selection
Oct 13 2023, 3:42 PM
a178n committed rMITK6365abecbbf7: Changing click point shape to filled CIRCLE (authored by a178n).
Changing click point shape to filled CIRCLE
Oct 13 2023, 3:42 PM
a178n committed rMITK3cdacd7db9b1: Migrating python related functionalities to dedicated class (authored by a178n).
Migrating python related functionalities to dedicated class
Oct 13 2023, 3:42 PM
a178n committed rMITKe7a8aa8351fe: Migrating SAM tool install options into Pref menu: part changes (authored by a178n).
Migrating SAM tool install options into Pref menu: part changes
Oct 13 2023, 3:42 PM
a178n committed rMITK6e78a214df0d: SAM Python class code refactoring (authored by a178n).
SAM Python class code refactoring
Oct 13 2023, 3:42 PM
a178n committed rMITK34a7d3b3077e: Code cleanup: Installer & model selection not part of SAM GUI anymore (authored by a178n).
Code cleanup: Installer & model selection not part of SAM GUI anymore
Oct 13 2023, 3:42 PM
a178n committed rMITKeb253d085c61: SAM tool can now handle cuda out of memory situation and throw error message (authored by a178n).
SAM tool can now handle cuda out of memory situation and throw error message
Oct 13 2023, 3:42 PM
a178n committed rMITK198eb50374b6: Moving GPU selection into MITK Preferences from SAM tool UI (authored by a178n).
Moving GPU selection into MITK Preferences from SAM tool UI
Oct 13 2023, 3:42 PM
a178n committed rMITK4e7bc874a68d: GPU name parsing bugfix (authored by a178n).
GPU name parsing bugfix
Oct 13 2023, 3:42 PM
a178n committed rMITKc82bcb145830: Adding SAM model selection tip for users (authored by a178n).
Adding SAM model selection tip for users
Oct 13 2023, 3:42 PM
a178n committed rMITK9c581076d539: Adding live status messages from tool class to GUI (authored by a178n).
Adding live status messages from tool class to GUI
Oct 13 2023, 3:42 PM
a178n committed rMITKf17b28a70fa1: SAM Tool: Minor code cleanup (authored by a178n).
SAM Tool: Minor code cleanup
Oct 13 2023, 3:42 PM
a178n committed rMITKfde7c40a6029: Move SAM tool Preferences to dedicated UI page (authored by a178n).
Move SAM tool Preferences to dedicated UI page
Oct 13 2023, 3:42 PM
a178n committed rMITK28d42b2f66d4: Update Install: SAM wrapper can be now pip installed (authored by a178n).
Update Install: SAM wrapper can be now pip installed
Oct 13 2023, 3:42 PM