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ordas (Sebastian Ordas)
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Aug 1 2016, 12:10 PM (436 w, 4 d)
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Aug 2 2016

ordas added a comment to T18847: Installed Workbench does not start.

Hello guys! I just wanted to know the status of this issue. I am currently not able to deploy my application. It runs on my binary build but I am not able to manually setup a zipped folder to deploy it.

Aug 2 2016, 10:19 AM · MITK (2015-03), Bugzilla
ordas added a comment to T16690: Segmentation picking tool..

Have a look at "Connected Region Selector" tool in bug-15696-multi-label-segmentation-v5. It does exactly that.

Aug 2 2016, 10:09 AM · Bugzilla, MITK
ordas added projects to T16692: mitkPadImageFilter is not templated: MITK, Bugzilla.
Aug 2 2016, 10:09 AM · Bugzilla, MITK
ordas added a comment to T16185: image cropper plugin does not allow for reusing the bounding object on a new selected image.

New remote branch pushed: bug-16185-reuse-boundingbox-imagecropper-plugin

Aug 2 2016, 10:07 AM · Bugzilla, MITK
ordas added projects to T16185: image cropper plugin does not allow for reusing the bounding object on a new selected image: MITK, Bugzilla.
Aug 2 2016, 10:07 AM · Bugzilla, MITK
ordas added a comment to T16178: missing vertical spacer in pointset interactor view.

[f52fff]: Merge branch 'bug-16178-pointset-interactor-plugin-missing-spacer-in-G

Merged commits:

2013-09-25 15:37:42 Sebastian Ordas [05c313]
added missing spacer in GUI

Aug 2 2016, 10:07 AM · MITK (2013-09), Bugzilla
ordas added a comment to T16178: missing vertical spacer in pointset interactor view.

New remote branch pushed: bug-16178-pointset-interactor-plugin-missing-spacer-in-GUI

Aug 2 2016, 10:07 AM · MITK (2013-09), Bugzilla
ordas added projects to T16178: missing vertical spacer in pointset interactor view: MITK, Bugzilla.
Aug 2 2016, 10:07 AM · MITK (2013-09), Bugzilla
ordas added a comment to T16153: [Segmentation] Jump to center of mass of segmentation on click.

Yes, it is already almost working like that in bug-15696-multi-label-segmentation-v5
Since the center of mass (or centroid) may be located outside the segmentation (e.g. a banana-shape object), I am using the median voxel found in a default rasterization, but of the complete object, i.e. starting from the upper-left vertex of the label's bounding box. A better approach would be to start the rasterization from the center of mass ...

Aug 2 2016, 10:07 AM · MITK (v2023.04), Bugzilla
ordas added a comment to T16104: color dialog in datamanager retrieves black color if canceled.

[8526c2]: Merge branch 'bug-16104-color-dialog-in-datamanager-problem-when-cance

Merged commits:

2013-09-18 13:09:08 Sebastian Ordas [5fa515]
quit if user cancels

Aug 2 2016, 10:07 AM · MITK (2013-09), Bugzilla
ordas added a comment to T16104: color dialog in datamanager retrieves black color if canceled.

New remote branch pushed: bug-16104-color-dialog-in-datamanager-problem-when-canceled

Aug 2 2016, 10:07 AM · MITK (2013-09), Bugzilla
ordas added projects to T16104: color dialog in datamanager retrieves black color if canceled: MITK, Bugzilla.
Aug 2 2016, 10:07 AM · MITK (2013-09), Bugzilla
ordas added a comment to T16077: Planar figure control points only movable when hovering over planar figure before.

[857372]: Merge branch 'bug-16077-planarfigure-controlpoints-only-movable-after-

Merged commits:

2013-09-25 15:13:07 Sebastian Ordas [fc5b08]
fixed issue by reworking the planarfigure interaction statemachine

Aug 2 2016, 10:07 AM · Bugzilla, MITK
ordas added a comment to T16077: Planar figure control points only movable when hovering over planar figure before.

Hi guys, it´s now working fine for me. Please give it a try so we can merge it for the coming release.

Aug 2 2016, 10:07 AM · Bugzilla, MITK
ordas added a comment to T16077: Planar figure control points only movable when hovering over planar figure before.

The fix in T15856 was something related the circle planar figure but I made changes in the interactor that were not enough to fix this problem also.

Aug 2 2016, 10:07 AM · Bugzilla, MITK
ordas added a comment to T16077: Planar figure control points only movable when hovering over planar figure before.

New remote branch pushed: bug-16077-planarfigure-controlpoints-only-movable-after-hovering

Aug 2 2016, 10:07 AM · Bugzilla, MITK
ordas added projects to T15947: Exception thrown from ctkPluginContextPrivate::isPluginContextValid() when closing the workbench: MITK, Bugzilla.
Aug 2 2016, 10:06 AM · MITK (2013-09), Bugzilla
ordas added a comment to T15882: make easier to rename a node in datamanager.

New remote branch pushed: bug-15882-easier-node-rename-in-datamanager

Aug 2 2016, 10:06 AM · MITK (2014-03), Bugzilla
ordas added projects to T15882: make easier to rename a node in datamanager: MITK, Bugzilla.
Aug 2 2016, 10:06 AM · MITK (2014-03), Bugzilla
ordas added projects to T15881: Remove Segmentation.qrc resource file from Qt independent module: MITK, Bugzilla.
Aug 2 2016, 10:06 AM · Bugzilla, MITK
ordas added a comment to T15881: Remove Segmentation.qrc resource file from Qt independent module.

[d0ddf0]: Merge branch 'bug-15881-remove-resource-file-from-segmentation-module'

Merged commits:

2013-08-19 16:01:42 Sebastian Ordas [2a1764]
Merge branch 'bug-15881-remove-resource-file-from-segmentation-module' of mitk.org:MITK into bug-15881-remove-resource-file-from-segmentation-module

Aug 2 2016, 10:06 AM · Bugzilla, MITK
ordas added a comment to T15870: ContourModel is strangely rendered in oblique planes.

also make sure that "contour.project-onto-plane" is false

Aug 2 2016, 10:06 AM · Bugzilla, MITK
ordas added a comment to T15870: ContourModel is strangely rendered in oblique planes.

check the value of scalardiff around line 167 (else if(scalardiff<0.25))

Aug 2 2016, 10:06 AM · Bugzilla, MITK
ordas added a comment to T15856: cannot select the center control point in planar circle figure.

[b5032b]: Merge branch 'bug-15856-planar-circle-fix-v2'

Merged commits:

2013-08-16 15:11:57 Sebastian Ordas [fb7274]
more elegant approach

Aug 2 2016, 10:06 AM · Bugzilla, MITK
ordas added a comment to T15856: cannot select the center control point in planar circle figure.

I will close this bug because planar circle is working fine.

Aug 2 2016, 10:06 AM · Bugzilla, MITK
ordas added a comment to T15856: cannot select the center control point in planar circle figure.

sorry, this time i will look into it more carefully

Aug 2 2016, 10:06 AM · Bugzilla, MITK
ordas added a comment to T15856: cannot select the center control point in planar circle figure.

yes, that would be the right way! please go ahead and merge it.

Aug 2 2016, 10:06 AM · Bugzilla, MITK
ordas added a comment to T15856: cannot select the center control point in planar circle figure.

ok, thanks for the review: it was a cut and paste error inside an existing loop

Aug 2 2016, 10:06 AM · Bugzilla, MITK
ordas added a comment to T15856: cannot select the center control point in planar circle figure.

sorry, busy elsewhere ...

Aug 2 2016, 10:06 AM · Bugzilla, MITK
ordas added a comment to T15856: cannot select the center control point in planar circle figure.

the "return false" that I removed from CheckControlPointHovering in my last push was not being accessed anyway.

Aug 2 2016, 10:06 AM · Bugzilla, MITK
ordas added a comment to T15856: cannot select the center control point in planar circle figure.

[4790cb]: Merge branch 'bug-15856-planar-circle-fix-v2'

Merged commits:

2013-08-14 17:00:52 Sebastian Ordas [824d2f]
allowed for selecting the central control point in planar
circle figures

Aug 2 2016, 10:06 AM · Bugzilla, MITK
ordas added a comment to T15856: cannot select the center control point in planar circle figure.

wait, don´t merge. Circle dragging is again not possible for me. Let me have a look ....

Aug 2 2016, 10:06 AM · Bugzilla, MITK
ordas added a comment to T15856: cannot select the center control point in planar circle figure.

ok. Now I got your change and pushed another fix. It is working for me. same for you?

Aug 2 2016, 10:06 AM · Bugzilla, MITK
ordas added a comment to T15856: cannot select the center control point in planar circle figure.

Furthermore, preview control points are shown in figures with a fixed number of control points (e.g. line, circle). Those preview control points should be visible on mitkPlanarPolygon and mitkPlanarSubdivisionPolygon only.

Aug 2 2016, 10:06 AM · Bugzilla, MITK
ordas added a comment to T15856: cannot select the center control point in planar circle figure.

New remote branch pushed: bug-15856-planar-circle-figure-fix

Aug 2 2016, 10:06 AM · Bugzilla, MITK
ordas added a comment to T15856: cannot select the center control point in planar circle figure.

New remote branch pushed: bug-15856-planar-circle-fix-v2

Aug 2 2016, 10:06 AM · Bugzilla, MITK
ordas added projects to T15856: cannot select the center control point in planar circle figure: MITK, Bugzilla.
Aug 2 2016, 10:06 AM · Bugzilla, MITK
ordas added projects to T15855: Volume calculations via mitkHeightFieldSurfaceClipImageFilter and mitkGeometryClipImageFilter differ: MITK, Bugzilla.
Aug 2 2016, 10:06 AM · Bugzilla, MITK
ordas added a comment to T15830: Improve usability of measurement bundle and figure interaction.

New remote branch pushed: bug-15830-misc-improvements-to-measurement-bundle

Aug 2 2016, 10:05 AM · Bugzilla, MITK
ordas added a comment to T15830: Improve usability of measurement bundle and figure interaction.
  • do not show control points when not hovering
  • have more shapes: diamond, segment, asterix, triangle
  • added mitkPlanarSubdivisionPolygon to Measurement bundle
  • added mitkPlanarEllipse to Measurement bundle
Aug 2 2016, 10:05 AM · Bugzilla, MITK
ordas added a comment to T15830: Improve usability of measurement bundle and figure interaction.
  • added mitkPlanarText and mitkPlanarArrow to measurement bundle
  • change icon when hovering/selecting via micro service
Aug 2 2016, 10:05 AM · Bugzilla, MITK
ordas added projects to T15830: Improve usability of measurement bundle and figure interaction: MITK, Bugzilla.
Aug 2 2016, 10:05 AM · Bugzilla, MITK
ordas added projects to T15757: missing "this" pointer in templated class: MITK, Bugzilla.
Aug 2 2016, 10:05 AM · Bugzilla, MITK
ordas added a comment to T15696: implement a multi-label segmentation functionality.

New remote branch pushed: bug-15696-multi-label-segmentation-v2

Aug 2 2016, 10:05 AM · Bugzilla, MITK
ordas added a comment to T15696: implement a multi-label segmentation functionality.

New remote branch pushed: bug-15696-multi-label-segmentation-v3

Aug 2 2016, 10:05 AM · Bugzilla, MITK
ordas added a comment to T15696: implement a multi-label segmentation functionality.

New remote branch pushed: bug-15696-multi-label-segmentation-v4

Aug 2 2016, 10:05 AM · Bugzilla, MITK
ordas added a comment to T15696: implement a multi-label segmentation functionality.

New remote branch pushed: bug-15696-multi-label-segmentation

Aug 2 2016, 10:05 AM · Bugzilla, MITK
ordas added projects to T15696: implement a multi-label segmentation functionality: MITK, Bugzilla.
Aug 2 2016, 10:05 AM · Bugzilla, MITK
ordas added a comment to T15554: Add a Reset() method to ProgressBarImplementation.

New remote branch pushed: bug-15554-add-reset-method-to-progressbar

Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added a comment to T15550: fast marching 2D crashes when a second click is done on another render window.

New remote branch pushed: bug-15550-bug-in-fast-marching-2D-click-different-rw

Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added a comment to T15554: Add a Reset() method to ProgressBarImplementation.

New remote branch pushed: bug-15554-add-reset-method-to-progressbar-new

Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added projects to T15554: Add a Reset() method to ProgressBarImplementation: MITK, Bugzilla.
Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added a comment to T15554: Add a Reset() method to ProgressBarImplementation.

New remote branch pushed: bug-15554-add-reset-method-to-progressbar-from-master

Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added a comment to T15554: Add a Reset() method to ProgressBarImplementation.

this last branch was created from master (two previous versions where based on a different topic branch which is not yet integrated into master)

Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added a comment to T15554: Add a Reset() method to ProgressBarImplementation.

[f0d91a]: Merge branch 'bug-15554-add-reset-method-to-progressbar-from-master'

Merged commits:

2013-07-18 10:18:40 Sebastian Ordas [5433c1]
add explicit Reset method

Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added projects to T15550: fast marching 2D crashes when a second click is done on another render window: MITK, Bugzilla.
Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added a comment to T15535: redesign Fast Marching 2D tool.

New remote branch pushed: bug-15535-redesign-fast-marching-2D-tool

Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added projects to T15535: redesign Fast Marching 2D tool: MITK, Bugzilla.
Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added a comment to T15530: Decrease cursor icon size in 2D tools.

New remote branch pushed: bug-15530-decrease-icon-size-in-2D-tools

Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added projects to T15530: Decrease cursor icon size in 2D tools: MITK, Bugzilla.
Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added a comment to T15513: remove deprecated mitk::Image::GetData () from mitk::Tool::CreateEmptySegmentationNode.

New remote branch pushed: bug-15513-remove-deprecated-GetData-from-CreateEmptySegmentationNode

Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added a comment to T15515: remove deprecated mitk::Image::GetData () from QmitkThresholdComponent::CreateThresholdSegmentation().

New remote branch pushed: bug-15515-remove-deprecated-GetData-from-QmitkThresholdComponent

Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added a comment to T15515: remove deprecated mitk::Image::GetData () from QmitkThresholdComponent::CreateThresholdSegmentation().

[169d9d]: Merge branch 'bug-15515-remove-deprecated-GetData-from-QmitkThresholdC

Merged commits:

2013-07-03 16:27:42 Sebastian Ordas [f5d715]
initial commit

Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added a comment to T15513: remove deprecated mitk::Image::GetData () from mitk::Tool::CreateEmptySegmentationNode.

[7520cc]: Merge branch 'bug-15513-remove-deprecated-GetData-from-CreateEmptySegm

Merged commits:

2013-07-03 16:17:14 Sebastian Ordas [b09c7e]
initial commit

Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added projects to T15515: remove deprecated mitk::Image::GetData () from QmitkThresholdComponent::CreateThresholdSegmentation(): MITK, Bugzilla.
Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added a comment to T15513: remove deprecated mitk::Image::GetData () from mitk::Tool::CreateEmptySegmentationNode.

[a16ba1]: Merge branch 'bug-15513-remove-deprecated-GetData-from-CreateEmptySegm

Merged commits:

2013-07-08 18:22:26 Sebastian Ordas [bf3899]
use image accessor writer instead of reader

Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added projects to T15513: remove deprecated mitk::Image::GetData () from mitk::Tool::CreateEmptySegmentationNode: MITK, Bugzilla.
Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added a comment to T15515: remove deprecated mitk::Image::GetData () from QmitkThresholdComponent::CreateThresholdSegmentation().

[c2f1f0]: Merge branch 'bug-15515-remove-deprecated-GetData-from-QmitkThresholdC

Merged commits:

2013-07-08 18:58:55 Sebastian Ordas [1153ca]
use write accessor instead of read accessor

Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added a comment to T15512: Unclear error message by PV analysis when segmentation is empty.

New remote branch pushed: bug-15512-RemovedErrorMessage

Aug 2 2016, 10:04 AM · MITK (2013-09), Bugzilla
ordas added a comment to T15510: remove deprecated mitk::Image::GetData () from mitkSurfaceToImageFilter.

deprecated GetData() has been replaced. QmitkSlicesInterpolator::OnAccept3DInterpolationClicked() uses mitkSurfaceToImageFilter and is still working (tested manually)
However, mitkSurfaceToImageFilterTest was crashing before the change (will have a look at it)

Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added a comment to T15510: remove deprecated mitk::Image::GetData () from mitkSurfaceToImageFilter.

New remote branch pushed: bug-15510-remove-deprecated-GetData-from-mitkSurfaceToImageFilter

Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added a comment to T15508: remove deprecated mitk::Image::GetData () from QmitkSlicesInterpolator.

New remote branch pushed: bug-15508-remove-deprecated-GetData-from-QmitkSliceInterpolator

Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added projects to T15508: remove deprecated mitk::Image::GetData () from QmitkSlicesInterpolator: MITK, Bugzilla.
Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added projects to T15510: remove deprecated mitk::Image::GetData () from mitkSurfaceToImageFilter: MITK, Bugzilla.
Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added a comment to T15510: remove deprecated mitk::Image::GetData () from mitkSurfaceToImageFilter.

will close it. mitkSurfaceToImageFilterTest shall be fixed on another branch

Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added a comment to T15493: Remove deprectated mitk::Image::GetData.

[0cbdd3]: Merge branch 'bug-15493-remove-deprecated-GetData-from-corrector-algor

Merged commits:

2013-07-10 15:21:24 Sebastian Ordas [f8ca2b]
made it simple

Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added a comment to T15493: Remove deprectated mitk::Image::GetData.

[dc79c1]: Merge branch 'bug-15493-remove-deprecated-GetData-from-seg-interp-cont

Merged commits:

2013-07-10 16:27:12 Sebastian Ordas [e17832]
removed first one

Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added a comment to T15493: Remove deprectated mitk::Image::GetData.

[124ace]: Merge branch 'bug-15493-remove-deprecated-GetData-from-OverwriteSliceI

Merged commits:

2013-07-10 16:50:36 Sebastian Ordas [524ad6]
removed two occurrences

Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added a comment to T15493: Remove deprectated mitk::Image::GetData.

New remote branch pushed: bug-15493-remove-deprecated-GetData-from-OverwriteSliceImageFilterTest

Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added a comment to T15493: Remove deprectated mitk::Image::GetData.

New remote branch pushed: bug-15493-remove-deprecated-GetData-from-seg-interp-cont

Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added a comment to T15493: Remove deprectated mitk::Image::GetData.

New remote branch pushed: bug-15493-remove-deprecated-GetData-from-corrector-algorithm

Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added a comment to T15476: ACVD Integration.

a cmake modification is needed in order to let MITK (and other toolkit) find and use this library. See attachment.

Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added a comment to T15476: ACVD Integration.

to be added into CMakeInput folder

Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added a comment to T15476: ACVD Integration.

to be added into CMakeInput folder

Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added a comment to T15476: ACVD Integration.

Finally, the following at the end of CMakelists.txt

Aug 2 2016, 10:04 AM · Bugzilla, MITK
ordas added a comment to T15475: Mesh rendering problem on timestep > 0.

yes, I also think that. I will open a new bug for that and close this one.
good luck!

Aug 2 2016, 10:04 AM · MITK (2013-09), Bugzilla
ordas added a comment to F1008: ACVDConfig.cmake.in.

to be added into CMakeInput folder

Aug 2 2016, 10:04 AM
ordas added a comment to T15475: Mesh rendering problem on timestep > 0.

Nil, could you please confirm whether the proposed solution (either Comment 12 or 13) has worked for you?

Aug 2 2016, 10:04 AM · MITK (2013-09), Bugzilla
ordas added a comment to T15475: Mesh rendering problem on timestep > 0.

an alternative to setting the points in a PointSet as deactivated by default, would be to have a method in PointSet such as:

Aug 2 2016, 10:04 AM · MITK (2013-09), Bugzilla
ordas added a comment to T15475: Mesh rendering problem on timestep > 0.

New remote branch pushed: bug-15475-pointlistwidget-not-handling-timesteps

Aug 2 2016, 10:04 AM · MITK (2013-09), Bugzilla
ordas added a comment to T15475: Mesh rendering problem on timestep > 0.

[f0ffc9]: Merge branch 'bug-15475-mesh-rendering-problem-on-timesteps'

Merged commits:

2013-09-11 15:06:49 Sebastian Ordas [00e14b]
added missing timesteps

Aug 2 2016, 10:04 AM · MITK (2013-09), Bugzilla
ordas added a comment to T15475: Mesh rendering problem on timestep > 0.

hello, some new findings from today´s bugsquashing:

Aug 2 2016, 10:04 AM · MITK (2013-09), Bugzilla
ordas added a comment to F1009: ACVDUse.cmake.in.

to be added into CMakeInput folder

Aug 2 2016, 10:04 AM
ordas added a comment to T15475: Mesh rendering problem on timestep > 0.

sorry for the late answer ... I missed your last message with the example data

Aug 2 2016, 10:04 AM · MITK (2013-09), Bugzilla
ordas added a comment to T15475: Mesh rendering problem on timestep > 0.

do you know how can I reproduce the error in "rendering with an interactor"?

Aug 2 2016, 10:04 AM · MITK (2013-09), Bugzilla
ordas added a comment to T15475: Mesh rendering problem on timestep > 0.

how do you generate the 4D mitk::Mesh in your setting? It looks like as a result of an iterative segmentation method in SPECT, isn´t it? It would suffice if you provide the code snippet for converting a set of mitk::Surface into a 4D mesh. Otherwise, I will try to do it myself

Aug 2 2016, 10:04 AM · MITK (2013-09), Bugzilla
ordas added a comment to T15475: Mesh rendering problem on timestep > 0.

Hi Nil, can you provide a 4D mesh in order to reproduce your bug? you refer to a 4D mitk::Mesh, right? not a mitk::Surface

Aug 2 2016, 10:04 AM · MITK (2013-09), Bugzilla
ordas added a comment to T15475: Mesh rendering problem on timestep > 0.

New remote branch pushed: bug-15475-mesh-rendering-problem-on-timesteps

Aug 2 2016, 10:04 AM · MITK (2013-09), Bugzilla
ordas added a comment to T15475: Mesh rendering problem on timestep > 0.

it looks like there were some timesteps taken as default (0) in the mesh mapper

Aug 2 2016, 10:04 AM · MITK (2013-09), Bugzilla
ordas added projects to T15454: 3D tools should report progress status: MITK, Bugzilla.
Aug 2 2016, 10:04 AM · Bugzilla, MITK