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metzger (Jasmin Metzger)
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Aug 1 2016, 12:10 PM (402 w, 3 d)

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Aug 27 2019

metzger closed T25412: MitkDICOMQIIO is not built as Resolved.
Aug 27 2019, 4:39 PM · MITK
metzger closed T20103: Improve usability of multilabel segmentation plugin as Resolved.
Aug 27 2019, 4:38 PM · MITK
metzger closed T23362: Load DICOM PM (Parametric Maps) in MITK as Invalid.
Aug 27 2019, 4:38 PM · MITK
metzger closed T23362: Load DICOM PM (Parametric Maps) in MITK, a subtask of T23337: Load DICOM SR in MITK, as Invalid.
Aug 27 2019, 4:38 PM · MICO (Demo_MICCAI_2017), MITK
metzger closed T23337: Load DICOM SR in MITK as Invalid.
Aug 27 2019, 4:37 PM · MICO (Demo_MICCAI_2017), MITK
metzger placed T25192: Enable DICOM SEG conversion for nrrd segmentations up for grabs.
Aug 27 2019, 4:37 PM · MITK (v2024.06), MICO (Demo MICCAI 2018)
metzger closed T23340: Wiki page for DICOM QI in MITK as Wontfix.

See E130-Projekte\MITK-Docs\MITK Schulung\2017 - MICCAI\DICOM_SEG_Gitbook

Aug 27 2019, 4:33 PM · MICO (Demo MICCAI 2018)

Aug 23 2019

metzger removed a watcher for Kaapana (internal): metzger.
Aug 23 2019, 12:20 PM

Aug 2 2019

metzger added a member for Kaapana (internal): maerz.
Aug 2 2019, 1:20 PM
metzger removed a member for Kaapana (internal): • skohl.
Aug 2 2019, 1:20 PM

Mar 18 2019

metzger added a comment to T25798: Saving segmentations as .dcm (DICOM SEG) does not work.

The derived segmentation can only be saved as DICOM if the original image is a DICOM.

Mar 18 2019, 12:33 PM · MITK

Mar 4 2019

metzger committed rMITKdf4448c2a261: Merge branch 'T25798-FixDICOMSegWriterConfidenceLevelCheck' (authored by metzger).
Merge branch 'T25798-FixDICOMSegWriterConfidenceLevelCheck'
Mar 4 2019, 1:47 PM

Mar 1 2019

metzger added a comment to T25798: Saving segmentations as .dcm (DICOM SEG) does not work.

Added a simple check for the dimension. I will have to take a closer look at the 4D (maybe 2D) support in the next weeks unless there are volunteers who can take more care of it.

Mar 1 2019, 4:56 PM · MITK
metzger added a comment to T25409: [MITK Diffusion] Fix tract envelope as DICOM seg.

The crash is caused by the duplicate creation of the layers:

Mar 1 2019, 4:48 PM · MITK
metzger committed rMITKebdb79aee750: Add missing DICOM seg properties, when initialized by an other image. (authored by metzger).
Add missing DICOM seg properties, when initialized by an other image.
Mar 1 2019, 4:35 PM
metzger committed rMITK53212b0c105a: Add DICOM property check to writer confidence level. (authored by metzger).
Add DICOM property check to writer confidence level.
Mar 1 2019, 4:33 PM
metzger committed rMITKcfded7f11c4e: At the moment there is a hard condition for the segmentation to be 3D. Should… (authored by metzger).
At the moment there is a hard condition for the segmentation to be 3D. Should…
Mar 1 2019, 4:33 PM
metzger added a comment to T25798: Saving segmentations as .dcm (DICOM SEG) does not work.

Pushed new branch T25798-FixDICOMSegWriterConfidenceLevelCheck.

Mar 1 2019, 4:32 PM · MITK

Jan 7 2019

metzger added a member for OP 4.1: • steint.
Jan 7 2019, 10:27 AM

Dec 21 2018

metzger renamed T25801: DICOM Seg writer doesn't support 4d DICOM images from DICOM Seg writer don't support 4d DICOM images to DICOM Seg writer doesn't support 4d DICOM images.
Dec 21 2018, 5:33 PM · Auto-closed, MITK
metzger updated subscribers of T25798: Saving segmentations as .dcm (DICOM SEG) does not work.
Dec 21 2018, 5:21 PM · MITK
metzger updated subscribers of T25801: DICOM Seg writer doesn't support 4d DICOM images.
Dec 21 2018, 5:20 PM · Auto-closed, MITK
metzger added a subtask for T25798: Saving segmentations as .dcm (DICOM SEG) does not work: T25801: DICOM Seg writer doesn't support 4d DICOM images.
Dec 21 2018, 5:19 PM · MITK
metzger added a parent task for T25801: DICOM Seg writer doesn't support 4d DICOM images: T25798: Saving segmentations as .dcm (DICOM SEG) does not work.
Dec 21 2018, 5:19 PM · Auto-closed, MITK
metzger triaged T25801: DICOM Seg writer doesn't support 4d DICOM images as Normal priority.
Dec 21 2018, 5:14 PM · Auto-closed, MITK
metzger added a comment to T25798: Saving segmentations as .dcm (DICOM SEG) does not work.

If you load a DICOM image and create a segmentation based on that, you could write a DICOM Seg. For that case, the writer works for me.
Unfortunately not for 4d images and I will report a task for that. T25801

Dec 21 2018, 5:10 PM · MITK
metzger committed rMITK2e11eb0d9c15: Add DICOM property check to writer confidence level. (authored by metzger).
Add DICOM property check to writer confidence level.
Dec 21 2018, 5:09 PM
metzger added a comment to T25798: Saving segmentations as .dcm (DICOM SEG) does not work.

Pushed new branch T25798-DICOMSegWriterConfidenceLevelCheck.

Dec 21 2018, 5:09 PM · MITK
metzger added a comment to T25798: Saving segmentations as .dcm (DICOM SEG) does not work.

Ok. Is this for the bugfix release? When is the 'deadline' for this?
Still I don't think that's the best way. Maybe we could rank the writer lower or something similar, so that people, who know when they can write DICOM SEGs, could use the writer. I will have a look at the GetWriterConfidenceLevel() checks asap.

Dec 21 2018, 3:00 PM · MITK
metzger reopened T25798: Saving segmentations as .dcm (DICOM SEG) does not work as "Open".

Sorry, I missed this task. Maybe we should add a condition to the confidence level check and do not return unsupported in general. I think at the moment most checks are done IN the writer and not before. What was the actual problem?

Dec 21 2018, 12:04 PM · MITK

Oct 23 2018

metzger added a member for Kaapana (internal): • rosst.
Oct 23 2018, 5:47 PM
metzger added a member for Kaapana (internal): • onogur.
Oct 23 2018, 5:47 PM

Oct 4 2018

metzger added a member for Kaapana (internal): k656s.
Oct 4 2018, 5:29 PM
metzger added a member for MICO: k656s.
Oct 4 2018, 5:29 PM

Sep 7 2018

metzger committed rMITKcff6974be1b0: Implement first prototype of structured report loading (authored by metzger).
Implement first prototype of structured report loading
Sep 7 2018, 6:50 PM
metzger committed rMITK76710fd95090: When loading a DICOM Seg object in DICOM browser view all objects with the same… (authored by metzger).
When loading a DICOM Seg object in DICOM browser view all objects with the same…
Sep 7 2018, 6:39 PM
metzger removed a project from T23362: Load DICOM PM (Parametric Maps) in MITK: MICO (Demo MICCAI 2018).
Sep 7 2018, 6:19 PM · MITK
metzger edited projects for T23345: Save nrrd segmentation as DICOM, added: MITK; removed MICO (Demo MICCAI 2018).
Sep 7 2018, 6:19 PM · Auto-closed, MITK
metzger added a comment to T23345: Save nrrd segmentation as DICOM.

T25192 could be helpful.

Sep 7 2018, 6:17 PM · Auto-closed, MITK
metzger triaged T25192: Enable DICOM SEG conversion for nrrd segmentations as Normal priority.
Sep 7 2018, 6:16 PM · MITK (v2024.06), MICO (Demo MICCAI 2018)
metzger added a comment to T25192: Enable DICOM SEG conversion for nrrd segmentations.

Some hints for this use case:

Sep 7 2018, 6:10 PM · MITK (v2024.06), MICO (Demo MICCAI 2018)
metzger added a comment to T25192: Enable DICOM SEG conversion for nrrd segmentations.

NOT READY FOR MASTER!

Sep 7 2018, 6:07 PM · MITK (v2024.06), MICO (Demo MICCAI 2018)
metzger committed rMITKda8aa1e37385: Merge branch 'T25192-MultilabelNrrdToDICOMSeg' into T25408-DemoMICCAI2018_master (authored by metzger).
Merge branch 'T25192-MultilabelNrrdToDICOMSeg' into T25408-DemoMICCAI2018_master
Sep 7 2018, 5:58 PM
metzger committed rMITK95471b8205f1: Changed the type of the "referenceFiles" property to a simple string. (authored by metzger).
Changed the type of the "referenceFiles" property to a simple string.
Sep 7 2018, 5:56 PM
metzger committed rMITK6f1b022e7b8d: Add serialization of properties marked as persistent to the multilabel nrrd… (authored by metzger).
Add serialization of properties marked as persistent to the multilabel nrrd…
Sep 7 2018, 5:56 PM
metzger added a comment to T25192: Enable DICOM SEG conversion for nrrd segmentations.

Pushed new branch T25192-MultilabelNrrdToDICOMSeg.

Sep 7 2018, 5:56 PM · MITK (v2024.06), MICO (Demo MICCAI 2018)
metzger added a comment to T25192: Enable DICOM SEG conversion for nrrd segmentations.
Sep 7 2018, 5:47 PM · MITK (v2024.06), MICO (Demo MICCAI 2018)
metzger added a comment to T25246: DICOM Seg Refactoring.

See T25412 task for resolving the dependency problem after the changes.

Sep 7 2018, 5:44 PM · MICO (Demo MICCAI 2018), MITK
metzger committed rMITKb3eccc06c41a: Merge branch 'T25412-DICOMQIErrorSmallerFixes' (authored by metzger).
Merge branch 'T25412-DICOMQIErrorSmallerFixes'
Sep 7 2018, 5:40 PM
metzger committed rMITKb2c7ada7581a: Add missing export macro and a update call for all labels. (authored by metzger).
Add missing export macro and a update call for all labels.
Sep 7 2018, 5:39 PM
metzger added a comment to T25412: MitkDICOMQIIO is not built.

Pushed new branch T25412-DICOMQIErrorSmallerFixes.

Sep 7 2018, 5:39 PM · MITK

Sep 6 2018

metzger added a comment to T25412: MitkDICOMQIIO is not built.

Due to the missing dependency to the Multilabel modul, the DICOMSegmentationIO class moved back to an autoload module in the Multilabel context. Only the mimetypes class remains in the DICOMQI module. @kompan: This is important to your changes in the PM context.

Sep 6 2018, 7:39 PM · MITK
metzger committed rMITK65343b35fd4c: Merge branch 'T25412-FixDependenciesErrorDICOMQIIO' (authored by metzger).
Merge branch 'T25412-FixDependenciesErrorDICOMQIIO'
Sep 6 2018, 7:39 PM
metzger committed rMITK7e8c16970039: Due to dependencies error the DICOMSegmentationIO moved back to the Multilabel… (authored by metzger).
Due to dependencies error the DICOMSegmentationIO moved back to the Multilabel…
Sep 6 2018, 7:27 PM
metzger updated subscribers of T25412: MitkDICOMQIIO is not built.
Sep 6 2018, 7:27 PM · MITK
metzger added a comment to T25412: MitkDICOMQIIO is not built.

Pushed new branch T25412-FixDependenciesErrorDICOMQIIO.

Sep 6 2018, 7:27 PM · MITK

Sep 5 2018

metzger edited projects for T23362: Load DICOM PM (Parametric Maps) in MITK, added: MICO (Demo MICCAI 2018); removed MICO (Demo_MICCAI_2017).
Sep 5 2018, 7:04 PM · MITK
metzger edited projects for T23345: Save nrrd segmentation as DICOM, added: MICO (Demo MICCAI 2018); removed MICO (Demo_MICCAI_2017).
Sep 5 2018, 7:01 PM · Auto-closed, MITK
metzger edited projects for T23343: Dicom editor can not load dicom segmentation objects, added: MICO (Demo MICCAI 2018); removed MICO (Demo_MICCAI_2017).
Sep 5 2018, 6:57 PM · MICO (Demo MICCAI 2018), MITK (2018-04)
metzger closed T22988: Remaining issues in the DICOM Seg IO handling multi layer images as Resolved.
Sep 5 2018, 6:56 PM · MICO (Demo_MICCAI_2017), MITK
metzger closed T25246: DICOM Seg Refactoring as Resolved.
Sep 5 2018, 6:53 PM · MICO (Demo MICCAI 2018), MITK
metzger committed rMITKdb0545ecc703: Merge branch 'T25246-DICOMSegRefactoringIntegrationMaster' (authored by metzger).
Merge branch 'T25246-DICOMSegRefactoringIntegrationMaster'
Sep 5 2018, 2:42 PM
metzger committed rMITK8646d9be40a8: Merge branch 'T25246-DICOMSeg_Refactoring' into T25246… (authored by metzger).
Merge branch 'T25246-DICOMSeg_Refactoring' into T25246…
Sep 5 2018, 2:42 PM
metzger committed rMITK7c2f82fcbc31: Raise DICOMQI in ModuleList. Multilabel has a dependency. (authored by metzger).
Raise DICOMQI in ModuleList. Multilabel has a dependency.
Sep 5 2018, 2:42 PM
metzger committed rMITK2f048cbceddb: Add missing include (authored by metzger).
Add missing include
Sep 5 2018, 2:42 PM
metzger committed rMITK7d491bec1e8e: Separate the property helper for DICOM Seg objects. the old class handles only… (authored by metzger).
Separate the property helper for DICOM Seg objects. the old class handles only…
Sep 5 2018, 2:42 PM
metzger committed rMITKffa996981523: Change DICOM QI mimetype again. Now every object type (SEG, PM,...) get his own… (authored by metzger).
Change DICOM QI mimetype again. Now every object type (SEG, PM,...) get his own…
Sep 5 2018, 2:42 PM
metzger committed rMITK21eb50300fc1: Generalize DICOMQIMimeType for usage of SEG, PM,... (authored by metzger).
Generalize DICOMQIMimeType for usage of SEG, PM,...
Sep 5 2018, 2:41 PM
metzger committed rMITK6e12dd86eab0: Move DICOMSegmentation IO classes to a separated module. Now DICOM SEG, PM and… (authored by metzger).
Move DICOMSegmentation IO classes to a separated module. Now DICOM SEG, PM and…
Sep 5 2018, 2:41 PM
metzger committed rMITKae05353c21c3: Remove unused include. (authored by metzger).
Remove unused include.
Sep 5 2018, 2:41 PM
metzger committed rMITKb8de652348b4: Remove return-by-value (authored by metzger).
Remove return-by-value
Sep 5 2018, 2:41 PM
metzger committed rMITK5bf50f208893: Code review topics. Replace raw pointer by unique_ptr. (authored by metzger).
Code review topics. Replace raw pointer by unique_ptr.
Sep 5 2018, 2:41 PM
metzger committed rMITK33ec6cae0faf: Changes based on a code review for DICOM PM (D141) Added Header file and… (authored by metzger).
Changes based on a code review for DICOM PM (D141) Added Header file and…
Sep 5 2018, 2:41 PM
metzger committed rMITK11a62e9f553a: Remove redundant copy constructor. (authored by metzger).
Remove redundant copy constructor.
Sep 5 2018, 2:41 PM
metzger added a comment to T25246: DICOM Seg Refactoring.

Pushed new branch T25246-DICOMSegRefactoringIntegrationMaster.

Sep 5 2018, 2:41 PM · MICO (Demo MICCAI 2018), MITK

Sep 3 2018

metzger committed rMITKd897d7f9becf: Add missing include (authored by metzger).
Add missing include
Sep 3 2018, 7:11 PM
metzger committed rMITK69236532091e: Separate the property helper for DICOM Seg objects. the old class handles only… (authored by metzger).
Separate the property helper for DICOM Seg objects. the old class handles only…
Sep 3 2018, 7:10 PM
metzger committed rMITKdab78688e44a: Change DICOM QI mimetype again. Now every object type (SEG, PM,...) get his own… (authored by metzger).
Change DICOM QI mimetype again. Now every object type (SEG, PM,...) get his own…
Sep 3 2018, 7:08 PM
metzger committed rMITK2dad786de411: Generalize DICOMQIMimeType for usage of SEG, PM,... (authored by metzger).
Generalize DICOMQIMimeType for usage of SEG, PM,...
Sep 3 2018, 11:02 AM
metzger committed rMITKe14ce84c3f4c: Move DICOMSegmentation IO classes to a separated module. Now DICOM SEG, PM and… (authored by metzger).
Move DICOMSegmentation IO classes to a separated module. Now DICOM SEG, PM and…
Sep 3 2018, 11:02 AM
metzger committed rMITK69fcf12a6f77: Remove unused include. (authored by metzger).
Remove unused include.
Sep 3 2018, 11:02 AM
metzger updated the task description for T25246: DICOM Seg Refactoring.
Sep 3 2018, 10:32 AM · MICO (Demo MICCAI 2018), MITK
metzger committed rMITKd5d22cd5057d: Remove return-by-value (authored by metzger).
Remove return-by-value
Sep 3 2018, 10:26 AM
metzger committed rMITK5cb605224794: Changes based on a code review for DICOM PM (D141) Added Header file and… (authored by metzger).
Changes based on a code review for DICOM PM (D141) Added Header file and…
Sep 3 2018, 9:52 AM
metzger committed rMITK922d212eb894: Code review topics. Replace raw pointer by unique_ptr. (authored by metzger).
Code review topics. Replace raw pointer by unique_ptr.
Sep 3 2018, 9:52 AM

Aug 23 2018

metzger reassigned T23343: Dicom editor can not load dicom segmentation objects from metzger to kislinsk.
Aug 23 2018, 4:18 PM · MICO (Demo MICCAI 2018), MITK (2018-04)

Aug 9 2018

metzger committed rMITKbc5f304d3706: Remove redundant copy constructor. (authored by metzger).
Remove redundant copy constructor.
Aug 9 2018, 11:59 AM
metzger added a comment to T25246: DICOM Seg Refactoring.

Pushed new branch T25246-DICOMSeg_Refactoring.

Aug 9 2018, 11:59 AM · MICO (Demo MICCAI 2018), MITK
metzger claimed T25246: DICOM Seg Refactoring.
Aug 9 2018, 11:55 AM · MICO (Demo MICCAI 2018), MITK
metzger triaged T25246: DICOM Seg Refactoring as Low priority.
Aug 9 2018, 11:55 AM · MICO (Demo MICCAI 2018), MITK

Aug 2 2018

metzger closed T23336: Homogenous look for relevant plugins and workbench as Resolved.
Aug 2 2018, 2:47 PM · MICO (Demo_MICCAI_2017)
metzger closed T23347: Change icons to new design as Resolved.
Aug 2 2018, 2:29 PM · MITK, MICO (Demo_MICCAI_2017)
metzger closed T23347: Change icons to new design, a subtask of T23336: Homogenous look for relevant plugins and workbench, as Resolved.
Aug 2 2018, 2:29 PM · MICO (Demo_MICCAI_2017)

Mar 29 2018

metzger added a comment to T24333: Noteworthy new features since MITK 2016.11.

Overview: Which compiler are recommended and supported?
See Tasks:
Visual Studio 2013 drop: T23868
Visual Studio 2017 support T24391 ,T23882, T23034
Support MSVC 19.11 T23276
GCC 7.2 Compatibility T23614
Mac support: T23248 T23985

Mar 29 2018, 3:39 PM · MITK (2018-04)
metzger added a comment to T24333: Noteworthy new features since MITK 2016.11.
In T24333#124396, @hentsch wrote:

MitkChart is new.

Mar 29 2018, 3:31 PM · MITK (2018-04)

Mar 28 2018

metzger triaged T24544: Update ScreenshotMaker plugin documentation as Low priority.
Mar 28 2018, 4:47 PM · Auto-closed, MITK
metzger triaged T24543: Improve usability of ScreenshotMaker as Normal priority.
Mar 28 2018, 4:46 PM · Auto-closed, MITK
metzger closed T23487: MITK crashes when loading DICOM Segmentation Object as Resolved.

The application should no longer crash when a surfaceSegmentationStorage class DICOM is loaded.
I also added a check for the SOPClassUID in the MimeType of the DICOMSegmentation. At the Moment we can only handle the SegmentationStorage objects. -.-

Mar 28 2018, 1:16 PM · MITK (2018-04)
metzger committed rMITK6e47d594f635: Merge branch 'T23487-CrashDifferentDICOMSegObjects' (authored by metzger).
Merge branch 'T23487-CrashDifferentDICOMSegObjects'
Mar 28 2018, 1:12 PM
metzger committed rMITKa715e3f155b8: Fixed crash for loarding Surface Segmentation Storage class DICOMs. - Add a… (authored by metzger).
Fixed crash for loarding Surface Segmentation Storage class DICOMs. - Add a…
Mar 28 2018, 1:09 PM
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