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Extend "Checkliste Segmentierung – Manuelle Segmentierung / 2D Segmentierung"
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Description

In T27506, @floca wrote:

All tools have to check for the following usage scenario:

  • segmentation on a 3D image
  • 3D segmentation (static) on a 4D (dynamic) image
  • 4D segmentation on a 4D image
  • All this with an image which time geometry does not start at 0 ms (e.g. MITK-Data/3D+t-ITKIO-TestData/LinearModel_4D_arbitrary_time_geometry.nrrd)

What the segmentation should look like/how it is generated must be specified per tool. But for all tools the following post conditions should apply:

  • Tools can be activated, used /confirmed.
  • The timestep of the reference image stays the same and is not changed by starting the segmentation.
  • Using the tool does not change the geometry of the segmentation (so 3D stays 3D and 4D segs are still 4D segs after the tool usage).

Extend the segementation check lists accordingly.

Event Timeline

kalali triaged this task as Normal priority.Fri, Sep 11, 10:10 AM
kalali created this task.

I updated the document and added content to explicitly tests

  • segmentation on a 3D image
  • 3D segmentation (static) on a 4D image
  • 4D segmentation (dynamic) on a 4D image

I tried to shorten the instructions to not make the document too long. I think the new content makes {T26987} even more important. With a new format we could add subsections for different data types.
I copied the modified document to E130-Daten\Release\Checklisten\MITK Workbench Release and renamed it to Checkliste Segmentierung – 2D Segmentierung

kalali renamed this task from Extend "Checkliste Segmentierung – Manuelle Segmentierung" to Extend "Checkliste Segmentierung – Manuelle Segmentierung / 2D Segmentierung".Sat, Sep 12, 1:04 PM
kalali moved this task from Backlog to Segmentation on the MITK (2020) board.Mon, Sep 14, 2:39 PM
kalali raised the priority of this task from Normal to High.Tue, Sep 15, 8:11 PM
kalali added a subscriber: gaoh.

@thomass, @gaoh Can someone please proofread?

just started to have a look.

My first -to be discussed- questions would be:
If we rework the checklists anyways, could we also switch languages or would that be a milestone for next time?

We discussed the open todos concerning Checklists (storage, format, language) and decided that this topic should be prioritized higher but not for the milestone of the new release / current documentation refactoring.
I think this would be a good option for the phase after the release but if you have a strong point to do it now, please state here.

I think the things you changed are all reasonable, the things I would add (I can not do it atm because I don't have access to the document)

The tester should check for static and dynamic

  1. whether the segmentation result has the right dimensions
  2. in case of dynamic segmentation, he/she should check whether the algorithm is applied on only the selected or on all timesteps