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thomass (Sarina Thomas)
User

Projects (11)

User Details

User Since
Aug 1 2016, 12:10 PM (191 w, 5 d)

Recent Activity

Fri, Mar 27

thomass triaged T27264: Extent Movie Maker to directly create gifs as Wishlist priority.
Fri, Mar 27, 1:38 PM · MITK
thomass triaged T27263: Measurements and pointsets display no valuable information as Normal priority.
Fri, Mar 27, 1:31 PM · MITK
thomass triaged T27262: Plugin for automatic metric computation as Normal priority.
Fri, Mar 27, 12:55 PM · MITK

Thu, Mar 12

thomass raised the priority of T27177: Segmentation based on Multiframe CT can not be saved as DICOM without error message from Low to Normal.

As stated before, we encountered more examples that raised the unknown exception, so I don’t agree to lower the priority on that.

Thu, Mar 12, 3:41 PM · Unknown Object (Project), MITK

Mar 3 2020

thomass added a comment to T27177: Segmentation based on Multiframe CT can not be saved as DICOM without error message.

The latest Release installer

Mar 3 2020, 1:20 PM · Unknown Object (Project), MITK

Mar 2 2020

thomass triaged T27177: Segmentation based on Multiframe CT can not be saved as DICOM without error message as Unbreak Now! priority.
Mar 2 2020, 3:44 PM · Unknown Object (Project), MITK

Feb 28 2020

thomass claimed T27106: [MITKDoc] Revise Volume Visualization Plugin Documentation.
Feb 28 2020, 8:10 AM · MITK

Feb 14 2020

thomass updated the task description for T27109: [MITKDoc] Revise Properties Plugin Documentation.
Feb 14 2020, 2:15 PM · MITK
thomass updated the task description for T27105: [MITKDoc] Revise Measurement Plugin Documentation.
Feb 14 2020, 2:14 PM · MITK
thomass updated the task description for T27104: [MITKDoc] Revise Modelfit Plugin Documentation.
Feb 14 2020, 2:14 PM · MITK
thomass updated the task description for T27103: [MITKDoc] Revise Point Set Interaction Plugin Documentation.
Feb 14 2020, 2:14 PM · MITK
thomass updated the task description for T27102: [MITKDoc] Revise Movie Maker Plugin Documentation.
Feb 14 2020, 2:13 PM · MITK
thomass updated the task description for T27101: [MITKDoc] Revise Logging Plugin Documentation.
Feb 14 2020, 2:12 PM · MITK
thomass updated the task description for T27099: [MITKDoc] Revise Clipping Plane Plugin Documentation.
Feb 14 2020, 2:11 PM · MITK
thomass updated the task description for T27098: [MITKDoc] Revise Image Cropper Plugin Documentation.
Feb 14 2020, 2:11 PM · MITK
thomass updated the task description for T27097: [MITKDoc] Revise Statistics Plugin Documentation.
Feb 14 2020, 2:11 PM · MITK
thomass placed T27094: [MITKDoc] Revise Segmentation Utilities Plugin Documentation up for grabs.
Feb 14 2020, 10:43 AM · MITK

Feb 13 2020

thomass committed rMITK00ae9bf751a0: Reorganize plugin list in documentation, changed some list levels and fixed… (authored by thomass).
Reorganize plugin list in documentation, changed some list levels and fixed…
Feb 13 2020, 9:56 AM
thomass claimed T27094: [MITKDoc] Revise Segmentation Utilities Plugin Documentation.
Feb 13 2020, 9:51 AM · MITK
thomass claimed T27098: [MITKDoc] Revise Image Cropper Plugin Documentation.
Feb 13 2020, 9:51 AM · MITK

Feb 12 2020

thomass triaged T27117: [MITKDoc] Revise Matchpoint Algorithm Control Plugin Documentation as Normal priority.
Feb 12 2020, 9:55 AM · MITK
thomass triaged T27116: [MITKDoc] Revise Matchpoint Algorithm Browser Plugin Documentation as Normal priority.
Feb 12 2020, 9:54 AM · MITK
thomass triaged T27115: [MITKDoc] Revise Matchpoint Frame Correction Plugin Documentation as Normal priority.
Feb 12 2020, 9:53 AM · MITK
thomass triaged T27114: [MITKDoc] Revise Matchpoint Mapper Plugin Documentation as Normal priority.
Feb 12 2020, 9:52 AM · MITK
thomass triaged T27113: [MITKDoc] Revise Matchpoint Registration Manipulator Plugin Documentation as Normal priority.
Feb 12 2020, 9:51 AM · MITK
thomass triaged T27112: [MITKDoc] Revise Matchpoint Registration Evaluator Plugin Documentation as Normal priority.
Feb 12 2020, 9:50 AM · MITK
thomass triaged T27111: [MITKDoc] Revise Matchpoint Registration Visualizer Plugin Documentation as Normal priority.
Feb 12 2020, 9:49 AM · MITK
thomass triaged T27110: [MITKDoc] Revise Command Line Tool/ Automatisation Plugin Documentation as Normal priority.
Feb 12 2020, 9:47 AM · MITK
thomass triaged T27109: [MITKDoc] Revise Properties Plugin Documentation as Normal priority.
Feb 12 2020, 9:46 AM · MITK
thomass triaged T27108: [MITKDoc] Revise Remeshing Plugin Documentation as Normal priority.
Feb 12 2020, 9:44 AM · MITK
thomass triaged T27107: [MITKDoc] Revise Screenshot Maker Plugin Documentation as Normal priority.
Feb 12 2020, 9:43 AM · MITK
thomass triaged T27106: [MITKDoc] Revise Volume Visualization Plugin Documentation as Normal priority.
Feb 12 2020, 9:41 AM · MITK
thomass triaged T27105: [MITKDoc] Revise Measurement Plugin Documentation as Normal priority.
Feb 12 2020, 9:40 AM · MITK
thomass triaged T27104: [MITKDoc] Revise Modelfit Plugin Documentation as Normal priority.
Feb 12 2020, 9:36 AM · MITK
thomass triaged T27103: [MITKDoc] Revise Point Set Interaction Plugin Documentation as Normal priority.
Feb 12 2020, 9:33 AM · MITK
thomass triaged T27102: [MITKDoc] Revise Movie Maker Plugin Documentation as Normal priority.
Feb 12 2020, 9:31 AM · MITK
thomass triaged T27101: [MITKDoc] Revise Logging Plugin Documentation as Normal priority.
Feb 12 2020, 9:29 AM · MITK
thomass triaged T27100: [MITKDoc] Revise DataManager Plugin Documentation as Normal priority.
Feb 12 2020, 9:22 AM · MITK
thomass triaged T27099: [MITKDoc] Revise Clipping Plane Plugin Documentation as Normal priority.
Feb 12 2020, 9:21 AM · MITK
thomass triaged T27098: [MITKDoc] Revise Image Cropper Plugin Documentation as Normal priority.
Feb 12 2020, 9:19 AM · MITK
thomass triaged T27097: [MITKDoc] Revise Statistics Plugin Documentation as Normal priority.
Feb 12 2020, 9:17 AM · MITK
thomass triaged T27096: [MITKDoc] Revise MultiLabel Segmentation Utilities Plugin Documentation as Normal priority.
Feb 12 2020, 8:59 AM · MITK
thomass triaged T27095: [MITKDoc] Revise MultiLabel Segmentation Plugin Documentation as Normal priority.
Feb 12 2020, 8:52 AM · MITK
thomass triaged T27094: [MITKDoc] Revise Segmentation Utilities Plugin Documentation as Normal priority.
Feb 12 2020, 8:49 AM · MITK
thomass triaged T27093: [MITKDoc] Revise Segmentation Plugin as Normal priority.
Feb 12 2020, 8:41 AM · MITK

Feb 7 2020

thomass committed rMITKcddd8da72039: Enable build of QT designer plugin by default (authored by thomass).
Enable build of QT designer plugin by default
Feb 7 2020, 2:33 PM
thomass added a comment to T27076: [CTK] QT designer plugins are not built anymore and cause problems in command line module.

Pushed new branch T27076-ChangeDesignerBuildFlagToDefault.

Feb 7 2020, 2:33 PM · MITK
thomass triaged T27076: [CTK] QT designer plugins are not built anymore and cause problems in command line module as Normal priority.
Feb 7 2020, 2:22 PM · MITK

Jan 23 2020

thomass committed rMITKd113c03e9199: Change layout of end user plugins (authored by thomass).
Change layout of end user plugins
Jan 23 2020, 9:13 AM

Jan 22 2020

thomass committed rMITKa60b344b8604: Move miniapp section to different location and reorganize layout (authored by thomass).
Move miniapp section to different location and reorganize layout
Jan 22 2020, 4:04 PM
thomass committed rMITK5ea3d0a459d0: Rearrange plugin list (authored by thomass).
Rearrange plugin list
Jan 22 2020, 4:04 PM

Jan 20 2020

thomass committed rMITK83657a10cd35: Merge branch 'T26840-MitkHomepageReorganization-TopLevel' of ssh://phabricator. (authored by thomass).
Merge branch 'T26840-MitkHomepageReorganization-TopLevel' of ssh://phabricator.
Jan 20 2020, 7:22 PM
thomass committed rMITK26a23e607635: Reorganize Workbench page and plugin list wip (authored by thomass).
Reorganize Workbench page and plugin list wip
Jan 20 2020, 7:22 PM
thomass added a reverting change for rMITK580b376a4cb5: fixed docu typos mentioned in T26841: rMITK80ba8f5e8497: Revert "fixed docu typos mentioned in T26841".
Jan 20 2020, 7:22 PM
thomass committed rMITK80ba8f5e8497: Revert "fixed docu typos mentioned in T26841" (authored by thomass).
Revert "fixed docu typos mentioned in T26841"
Jan 20 2020, 7:22 PM
thomass committed rMITK580b376a4cb5: fixed docu typos mentioned in T26841 (authored by thomass).
fixed docu typos mentioned in T26841
Jan 20 2020, 7:22 PM

Jan 10 2020

thomass updated the task description for T26754: Review checklists.
Jan 10 2020, 9:20 PM · Request for Discussion, Unknown Object (Project), MITK
thomass triaged T26989: [Checklist] GUI test data originates from different sources as Normal priority.
Jan 10 2020, 8:45 PM · Unknown Object (Project), Request for Discussion, MITK
thomass triaged T26988: [Checklist] LevelWindow checklist does not provide explicit expected results for sufficient verification as Normal priority.
Jan 10 2020, 8:38 PM · Request for Discussion, Unknown Object (Project), MITK

Jan 9 2020

thomass updated the task description for T26754: Review checklists.
Jan 9 2020, 1:53 PM · Request for Discussion, Restricted Project, MITK

Jan 8 2020

thomass updated subscribers of T26972: Dialog and plugin layout seems to be not shown correctly on laptops.
Jan 8 2020, 3:12 PM · MITK
thomass triaged T26972: Dialog and plugin layout seems to be not shown correctly on laptops as Normal priority.
Jan 8 2020, 3:09 PM · MITK
thomass triaged T26968: [DataManager] "Show only selected nodes" button causes 2D widgets in the 3D renderwindow to vanish as Normal priority.
Jan 8 2020, 2:45 PM · MITK
thomass triaged T26967: [Segmentation] Pressing the X button on threshold confirm dialogs does not stop the execution as Normal priority.
Jan 8 2020, 2:17 PM · MITK

Nov 28 2019

thomass claimed T26841: Documentation typo.
Nov 28 2019, 10:22 AM
thomass committed rMITKe28eb32145c3: Restructure landing page and move AboutMITK section (authored by thomass).
Restructure landing page and move AboutMITK section
Nov 28 2019, 10:03 AM

Nov 22 2019

thomass committed rMITK369758f5ca9e: Initial cleanup and re-organization wip (authored by thomass).
Initial cleanup and re-organization wip
Nov 22 2019, 1:13 PM
thomass added a comment to T26840: Mission Homepage Reorganization .

Pushed new branch T26840-MitkHomepageReorganization-TopLevel.

Nov 22 2019, 1:12 PM · MITK

Nov 21 2019

thomass triaged T26840: Mission Homepage Reorganization as Normal priority.
Nov 21 2019, 3:37 PM · MITK

Nov 20 2019

thomass committed rMITKb5750690feff: Changes made to the datamanager plugin documentation, modified images and text (authored by thomass).
Changes made to the datamanager plugin documentation, modified images and text
Nov 20 2019, 3:19 PM

Jul 2 2019

thomass added a project to T26388: Colorcoding for surfaces does not work correctly: Restricted Project.
Jul 2 2019, 2:24 PM · Restricted Project, MITK
thomass moved T26388: Colorcoding for surfaces does not work correctly from Backlog to MITK Meeting on the Request for Discussion board.
Jul 2 2019, 2:22 PM · Restricted Project, MITK

Jun 7 2019

thomass triaged T26388: Colorcoding for surfaces does not work correctly as Normal priority.
Jun 7 2019, 1:54 PM · Restricted Project, MITK

Jul 20 2018

thomass added a comment to T24893: Image Cropper handles missing in 2D (non-axes-aligned image).

We added some code to identify two cases:

  1. Non-aligned image geometry
  2. View and image are not aligned after cross hair rotation
Jul 20 2018, 11:59 AM · Restricted Project, MITK

Jun 25 2018

thomass added a comment to T24893: Image Cropper handles missing in 2D (non-axes-aligned image).

I see your point, however right now we can't come up with a clean solution so that 2D handles make sense if the axes are not aligned.
One possible solution could be to enforce a reinit like it is currently done in the segmentation plugin.

Jun 25 2018, 6:40 PM · Restricted Project, MITK

Jun 22 2018

thomass added a comment to T24893: Image Cropper handles missing in 2D (non-axes-aligned image).

Non-axis aligned images should give a warning that you need to reinit them first. The problem is that handles for

  • non-axis aligned images
  • images in which you rotate the crosshair
Jun 22 2018, 10:04 AM · Restricted Project, MITK

Jun 12 2018

thomass added a comment to T24885: Coupled crosshair rotation out-of-view bug.

Seems to be very odd, since the coronal view is not at the crosshair position anymore but somewhere completely different.
@kislinsk is this somehow related to the image slicer issues?

Jun 12 2018, 3:00 PM · MITK
thomass renamed T24885: Coupled crosshair rotation out-of-view bug from Coupled crosshair rotation outt-of-view bug to Coupled crosshair rotation out-of-view bug.
Jun 12 2018, 2:56 PM · MITK
thomass updated subscribers of T24885: Coupled crosshair rotation out-of-view bug.
Jun 12 2018, 2:50 PM · MITK
thomass added a comment to T24893: Image Cropper handles missing in 2D (non-axes-aligned image).

It seems that it is somehow dependent on the data whether the handles work or not.
Just today I run into the same problem so you were a bit faster ;) I will have a look.

Jun 12 2018, 2:48 PM · Restricted Project, MITK
thomass claimed T24893: Image Cropper handles missing in 2D (non-axes-aligned image).
Jun 12 2018, 2:43 PM · Restricted Project, MITK

Feb 2 2018

thomass added a comment to T24172: In CreateSmoothedPolygon interpolation sometimes leads to inaccurate results.

Switching off interpolation leads to more accurate results but on the contrary produces some weird artefacts which cannot be quite explained yet.

Feb 2 2018, 3:01 PM · MITK
thomass committed rMITK3f16d150c12e: Added entry in preferences for switching interpolation mode (authored by thomass).
Added entry in preferences for switching interpolation mode
Feb 2 2018, 2:57 PM
thomass added a comment to T24172: In CreateSmoothedPolygon interpolation sometimes leads to inaccurate results.

Pushed new branch T24172-InterpolationForSmoothedPolygonModel.

Feb 2 2018, 2:57 PM · MITK
thomass created T24172: In CreateSmoothedPolygon interpolation sometimes leads to inaccurate results.
Feb 2 2018, 2:42 PM · MITK

Jan 11 2018

thomass awarded T24041: VolumeMapperVtkSmart3D illegaly changes spacing of every mitk::Image's vtkImageData to (1, 1, 1) a Party Time token.
Jan 11 2018, 11:25 AM · MITK

Oct 13 2017

thomass created T23551: MITK does not support Dicom Subgroup Tags.
Oct 13 2017, 4:06 PM · MITK

Aug 4 2017

thomass updated the task description for T23175: Polygon Creation does not cover LabelSet images.
Aug 4 2017, 3:28 PM · MITK
thomass created T23179: Cleanup polygon model creation .
Aug 4 2017, 3:26 PM · MITK
thomass created T23175: Polygon Creation does not cover LabelSet images.
Aug 4 2017, 3:14 PM · MITK
thomass added a comment to T23078: MITK Workbench crashes trying to create smoothed polygon .

Creating smoothed polygons now works for segmentation and multilabel without causing any crashes. However, no multilabel support is provided yet. The next step will be to cover multilabel support in QmitkCreatePolygonModelAction or rethink the structure as such (i.e. why we can't create a surface without segmentation or why the action is triggered randomly).
Furthermore, we removed ShowSegmentationAsSmoothedSurface from both, segmentation and multilabel. We have to further investigate why the class was created in first place and if there is any advantage of the ITK implementation used in this class as opposed to the VTK driven implementation in mitkManualSegmentationToSurfaceFilter.

Aug 4 2017, 2:51 PM · Restricted Project, MITK
thomass committed rMITK5d34c137d546: Added a smoothing hint checkbox on multilabel preference page (authored by thomass).
Added a smoothing hint checkbox on multilabel preference page
Aug 4 2017, 2:41 PM
thomass committed rMITKe5eb8e11b499: Removed class mitkShowSegmentationAsSmoothedSurface from both files and… (authored by thomass).
Removed class mitkShowSegmentationAsSmoothedSurface from both files and…
Aug 4 2017, 2:39 PM
thomass added a project to T23078: MITK Workbench crashes trying to create smoothed polygon : Restricted Project.
Aug 4 2017, 10:40 AM · Restricted Project, MITK
thomass claimed T23135: PointSets doesn't work in 4-D.
Aug 4 2017, 10:37 AM · Restricted Project, MITK
thomass added a project to T23135: PointSets doesn't work in 4-D: Restricted Project.
Aug 4 2017, 10:36 AM · Restricted Project, MITK
thomass committed rMITKe65211daf7c3: Changed action so that it always uses ShowSegmentationAsSurface independent of… (authored by thomass).
Changed action so that it always uses ShowSegmentationAsSurface independent of…
Aug 4 2017, 10:03 AM
thomass added a comment to T23078: MITK Workbench crashes trying to create smoothed polygon .

Pushed new branch T23078-FixCrashOfOnCreatingSmoothedPolygonSurface.

Aug 4 2017, 10:02 AM · Restricted Project, MITK
thomass claimed T23078: MITK Workbench crashes trying to create smoothed polygon .
Aug 4 2017, 9:57 AM · Restricted Project, MITK

Jul 21 2017

thomass added a comment to T23078: MITK Workbench crashes trying to create smoothed polygon .

On some Windows systems it only crashes if plugin multilabel is switched on & open or no plugin is open.
If plugin segmentation is open it works fine. On Linux it even happens if the segmentation plugin is open.

Jul 21 2017, 1:54 PM · Restricted Project, MITK