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Aug 2 2016

neuhaus added a comment to T3270: Rename NavigationDataLandmarkTransformFilter::SetXXXPoints to SetXXXLandmarks.

[SVN revision 21417]
CHG (#3270): rename SetXXXPoints() to SetXXXLandmarks()

Aug 2 2016, 9:35 AM · Bugzilla, MITK
neuhaus added a comment to T3270: Rename NavigationDataLandmarkTransformFilter::SetXXXPoints to SetXXXLandmarks.

darclients showed no errors, closing bug now

Aug 2 2016, 9:35 AM · Bugzilla, MITK
neuhaus added projects to T3270: Rename NavigationDataLandmarkTransformFilter::SetXXXPoints to SetXXXLandmarks: MITK, Bugzilla.
Aug 2 2016, 9:35 AM · Bugzilla, MITK
neuhaus added a comment to T3265: rename TrackingDevice::GetMode() to GetState().

[SVN revision 21415]
CHG (#3265): rename TrackingDevice::GetMode() to GetState()

Aug 2 2016, 9:34 AM · Bugzilla, MITK
neuhaus added a comment to T3265: rename TrackingDevice::GetMode() to GetState().

[SVN revision 21418]
COMP (#3265): rename TrackingDevice::GetMode() to GetState()
ENH (#3139): allow to add multiple passive tools in file open dialog

Aug 2 2016, 9:34 AM · Bugzilla, MITK
neuhaus added a comment to T3265: rename TrackingDevice::GetMode() to GetState().

darclients showed no errors, closing bug now

Aug 2 2016, 9:34 AM · Bugzilla, MITK
neuhaus added a comment to T3265: rename TrackingDevice::GetMode() to GetState().

also rename the state enum from TrackingDeviceMode to TrackingDeviceState!

Aug 2 2016, 9:34 AM · Bugzilla, MITK
neuhaus added a comment to T3265: rename TrackingDevice::GetMode() to GetState().

[SVN revision 21909]
CHG (#3265): rename TrackingDeviceMode to TrackingDeviceState, rename GetMode() to GetState()

Aug 2 2016, 9:34 AM · Bugzilla, MITK
neuhaus added a comment to T3265: rename TrackingDevice::GetMode() to GetState().

[SVN revision 21908]
CHG (#3265): rename TrackingDeviceMode to TrackingDeviceState, rename GetMode() to GetState()

Aug 2 2016, 9:34 AM · Bugzilla, MITK
neuhaus added a comment to T3265: rename TrackingDevice::GetMode() to GetState().

[SVN revision 21414]
CHG (#3265): rename TrackingDevice::GetMode() to GetState()

Aug 2 2016, 9:34 AM · Bugzilla, MITK
neuhaus added a comment to T3265: rename TrackingDevice::GetMode() to GetState().

needs to be renamed in all subclasses too

Aug 2 2016, 9:34 AM · Bugzilla, MITK
neuhaus added projects to T3265: rename TrackingDevice::GetMode() to GetState(): MITK, Bugzilla.
Aug 2 2016, 9:34 AM · Bugzilla, MITK
neuhaus added a comment to T3264: Write an IGT Tracking Logger.

(In reply to comment #6)

Still missing:

  • test registration (test image needed)

-->

/home/jochen/Projekte/MITK-IGT/6 Landmarks, 2 targets example.pdf

+ /home/jochen/Projekte/MITK-IGT/6 Landmarks, 2 targets example.png

Aug 2 2016, 9:34 AM · Bugzilla, MITK
neuhaus added projects to T3260: Refactor Claron tracking classes: MITK, Bugzilla.
Aug 2 2016, 9:34 AM · Bugzilla, MITK
neuhaus added a comment to T3260: Refactor Claron tracking classes.

The design differs from other TrackingDevice classes. Intention of this ticket was to unify the design and therefore improve maintainability. This would be nice, but is not mandatory. If no one wants to do it, we can keep the current implementation.

Aug 2 2016, 9:34 AM · Bugzilla, MITK
neuhaus added projects to T3261: Aurora Tracking Volume seems to be wrong: MITK, Bugzilla.
Aug 2 2016, 9:34 AM · Bugzilla, MITK
neuhaus added a comment to T3241: Create some getting started documentation for the ExtApp.

[SVN revision 21204]
DOC (#3241): Add user manual for IGTTutorial view

Aug 2 2016, 9:34 AM · Bugzilla, MITK
neuhaus added a comment to T3241: Create some getting started documentation for the ExtApp.

[SVN revision 21210]
DOC (#3241): Add user manuals for IGTTutorial and IGTExample views

Aug 2 2016, 9:34 AM · Bugzilla, MITK
neuhaus added a comment to T3241: Create some getting started documentation for the ExtApp.

[SVN revision 21207]
DOC (#3241): undo corrupt commits that modified BasicImageProcessing instead of IGTEXample and IGTTutorial

Aug 2 2016, 9:34 AM · Bugzilla, MITK
neuhaus added a comment to T3241: Create some getting started documentation for the ExtApp.

[SVN revision 21203]
DOC (#3241): Add user manual for IGTExample view

Aug 2 2016, 9:34 AM · Bugzilla, MITK
neuhaus added a comment to T3241: Create some getting started documentation for the ExtApp.

I'll write something for

  • IGT Example
  • Image Guided Therapy Tutorial
Aug 2 2016, 9:34 AM · Bugzilla, MITK
neuhaus added projects to T3228: Allow to apply translation and rotation independently in ObjectVisualizationFilter: MITK, Bugzilla.
Aug 2 2016, 9:34 AM · Bugzilla, MITK
neuhaus added a comment to T3228: Allow to apply translation and rotation independently in ObjectVisualizationFilter.

the feature is working, but needs to be tested. And a unit test has to be extended.

Aug 2 2016, 9:34 AM · Bugzilla, MITK
neuhaus added a comment to T3228: Allow to apply translation and rotation independently in ObjectVisualizationFilter.

[SVN revision 21036]
ENH (#3228): allow to apply the translation and rotation separately

Aug 2 2016, 9:34 AM · Bugzilla, MITK
neuhaus added a comment to T3211: NavigationToolWriter/Reader works only with windows pathnames.

use Poco::Path::separator() to get the system separator character. See SceneSerialization for examples.

Aug 2 2016, 9:33 AM · Bugzilla, MITK
neuhaus added a comment to T3197: Enabling wired Aurora tools produces errors.

I already commented out the defect code parts. Therefore, tool handling should work without crashes, but reading the serial number of wired tools does not work with this version (but this is not an important feature for the release). Reading wired tool information should be refactored in the future, but I think, it is not release relevant.

Aug 2 2016, 9:33 AM · Bugzilla, MITK
neuhaus added projects to T3197: Enabling wired Aurora tools produces errors: MITK, Bugzilla.
Aug 2 2016, 9:33 AM · Bugzilla, MITK
neuhaus added a comment to T3197: Enabling wired Aurora tools produces errors.

now adding passive tools to the polaris leads to a crash in your code:

Aug 2 2016, 9:33 AM · Bugzilla, MITK
neuhaus added projects to T3190: Crash when switching from/to RigidRegistration and PointBasedRegistration: MITK, Bugzilla.
Aug 2 2016, 9:33 AM · Bugzilla, MITK
neuhaus added a comment to T3173: Ext App of 0.14 branch does not start.

I tried to run ExtApp with a new checkout of the 0.14 branch (revision #20873) and got the same error message.

Aug 2 2016, 9:33 AM · Bugzilla, MITK
neuhaus added a comment to T3173: Ext App of 0.14 branch does not start.

CoreApp is starting, but crashes when opening the Welcome view.

Aug 2 2016, 9:33 AM · Bugzilla, MITK
neuhaus added a comment to T3170: MITK public release 0.14.

(In reply to comment #31)

Jochen, Measurement does work for me.

Aug 2 2016, 9:33 AM · Bugzilla, MITK
neuhaus added a comment to T3170: MITK public release 0.14.

I just downloaded and installed the 0.14 Installer.

Aug 2 2016, 9:33 AM · Bugzilla, MITK
neuhaus added a comment to T3170: MITK public release 0.14.

(In reply to comment #22)

Maybe we could add a few new screenshots to the sourceforge project site.

Aug 2 2016, 9:33 AM · Bugzilla, MITK
neuhaus added a comment to T3170: MITK public release 0.14.

(In reply to comment #21)

open issues:

  • find out about creating a real release in the new sourceforge system

(jochen?)

Aug 2 2016, 9:33 AM · Bugzilla, MITK
neuhaus added a comment to T3168: remove Q3SUPPORT dependency from IGT views.

[SVN revision 20839]
COMP (#3168): remove obsolete headers

Aug 2 2016, 9:33 AM · Bugzilla, MITK
neuhaus added projects to T3168: remove Q3SUPPORT dependency from IGT views: MITK, Bugzilla.
Aug 2 2016, 9:33 AM · Bugzilla, MITK
neuhaus added a comment to T3168: remove Q3SUPPORT dependency from IGT views.

[SVN revision 20837]
FIX (#3168): remove Q3SUPPORT dependency from QmitkIGTExampleView

Aug 2 2016, 9:33 AM · Bugzilla, MITK
neuhaus added projects to T3149: mitkImageWriterTest does not test image writing: MITK, Bugzilla.
Aug 2 2016, 9:33 AM · Bugzilla, MITK
neuhaus added a comment to T3149: mitkImageWriterTest does not test image writing.

[SVN revision 20788]
FIX (#3149): use testing macros consistently

Aug 2 2016, 9:33 AM · Bugzilla, MITK
neuhaus added a comment to T3145: surface generated from segmentation has holes.

holes in the surface that was created from the segmentation

holes-in-segmentation.jpg (439×345 px, 32 KB)

Aug 2 2016, 9:33 AM · Bugzilla, MITK
neuhaus added projects to T3144: Errors when using ImageStatistics after AutoCropping a segmentation: MITK, Bugzilla.
Aug 2 2016, 9:33 AM · Bugzilla, MITK
neuhaus added a comment to T3145: surface generated from segmentation has holes.

Could be that I selected "Auto crop segmentation" before creating the surface. This would explain the holes.

Aug 2 2016, 9:33 AM · Bugzilla, MITK
neuhaus added a comment to F406: holes-in-segmentation.jpg.

holes in the surface that was created from the segmentation

Aug 2 2016, 9:33 AM
neuhaus added projects to T3145: surface generated from segmentation has holes: MITK, Bugzilla.
Aug 2 2016, 9:33 AM · Bugzilla, MITK
neuhaus added a comment to T3139: improve NDIConfigurationWidget.

[SVN revision 21035]
ENH (#3139): tag nodes that are assigned, return tool and node assignments

Aug 2 2016, 9:32 AM · Bugzilla, MITK
neuhaus added projects to T3139: improve NDIConfigurationWidget: MITK, Bugzilla.
Aug 2 2016, 9:32 AM · Bugzilla, MITK
neuhaus added a comment to T3139: improve NDIConfigurationWidget.

[SVN revision 21037]
ENH (#3139): update GUI

Aug 2 2016, 9:32 AM · Bugzilla, MITK
neuhaus added a comment to T3139: improve NDIConfigurationWidget.

[SVN revision 21034]
ENH (#3139): tag nodes that are assigned

Aug 2 2016, 9:32 AM · Bugzilla, MITK
neuhaus added a comment to T3139: improve NDIConfigurationWidget.

[SVN revision 20738]
ADD (#3139): add custom delegate to display and edit NDI tools in NDIConfigurationWidget

Aug 2 2016, 9:32 AM · Bugzilla, MITK
neuhaus added a comment to T3137: Improve IGT-Pipeline handling.

[SVN revision 20735]
DOC (#3137): add warning to documentation

Aug 2 2016, 9:32 AM · Bugzilla, MITK
neuhaus added a comment to T3137: Improve IGT-Pipeline handling.

Reset to default Assignee

Aug 2 2016, 9:32 AM · Bugzilla, MITK
neuhaus added a comment to T3137: Improve IGT-Pipeline handling.

[SVN revision 20732]
ENH (#3137): set name of NavigationData outputs to name of TrackingTool inputs

Aug 2 2016, 9:32 AM · Bugzilla, MITK
neuhaus added a comment to T3137: Improve IGT-Pipeline handling.

[SVN revision 20734]
FIX (#3137): throw exception instead of returning -1

Aug 2 2016, 9:32 AM · Bugzilla, MITK
neuhaus added a comment to T3137: Improve IGT-Pipeline handling.

[SVN revision 20737]
ENH (#3137): add GetInput(std::string name) and GetInputIndex(std::string name) methods

Aug 2 2016, 9:32 AM · Bugzilla, MITK
neuhaus added a comment to T3137: Improve IGT-Pipeline handling.

[SVN revision 20739]
ENH (#3137): use custom delegate for tools table, implement OnAddPassiveTool() method

Aug 2 2016, 9:32 AM · Bugzilla, MITK
neuhaus added a comment to T3137: Improve IGT-Pipeline handling.

[SVN revision 20729]
ENH (#3137): add name property

Aug 2 2016, 9:32 AM · Bugzilla, MITK
neuhaus added a comment to T3137: Improve IGT-Pipeline handling.

[SVN revision 20731]
ENH (#3137): add GetOutput(std::string name) and GetOutputIndex(std::string name) methods

Aug 2 2016, 9:32 AM · Bugzilla, MITK
neuhaus added a comment to T3137: Improve IGT-Pipeline handling.

[SVN revision 20728]
ENH (#3137): add GetToolByName() method

Aug 2 2016, 9:32 AM · Bugzilla, MITK
neuhaus added projects to T3137: Improve IGT-Pipeline handling: MITK, Bugzilla.
Aug 2 2016, 9:32 AM · Bugzilla, MITK
neuhaus added a comment to T3137: Improve IGT-Pipeline handling.

[SVN revision 20730]
COMP (#3137): fix typo

Aug 2 2016, 9:32 AM · Bugzilla, MITK
neuhaus added a comment to T3133: Aurora Tracking Volume isn't aligned correctly.

As far as I know, different revision of Aurora have different tracking volumes. Maybe this should be considered too. Ingmar?

Aug 2 2016, 9:32 AM · Bugzilla, MITK
neuhaus added projects to T3125: Remove PlanarFigure related code in CoreUI: MITK, Bugzilla.
Aug 2 2016, 9:32 AM · Bugzilla, MITK
neuhaus added a comment to T3127: Crash in mbilog.cpp.

can you fix this?
Setting the type of size to int won't help, because then the for loop will be messed up if size is negative.

Aug 2 2016, 9:32 AM · Bugzilla, MITK
neuhaus added projects to T3127: Crash in mbilog.cpp: MITK, Bugzilla.
Aug 2 2016, 9:32 AM · Bugzilla, MITK
neuhaus added a comment to T3105: GlobalInteraction destructor can cause application crash.

[SVN revision 20592]
FIX (#3105): explicitly delete member variables in the destructor in the correct order to avoid access to already deleted member variables

Aug 2 2016, 9:32 AM · Bugzilla, MITK
neuhaus added a comment to T3105: GlobalInteraction destructor can cause application crash.

(In reply to comment #2)

[SVN revision 20592]
FIX (#3105): explicitly delete member variables in the destructor in the
correct order to avoid access to already deleted member variables

Aug 2 2016, 9:32 AM · Bugzilla, MITK
neuhaus added a comment to T3105: GlobalInteraction destructor can cause application crash.

granting core modification as proxy for Marco and Daniel who are both unavailable.

Aug 2 2016, 9:32 AM · Bugzilla, MITK
neuhaus added projects to T3105: GlobalInteraction destructor can cause application crash: MITK, Bugzilla.
Aug 2 2016, 9:32 AM · Bugzilla, MITK
neuhaus added projects to T3104: ImageStatistics module should calculate histogram in a background thread: MITK, Bugzilla.
Aug 2 2016, 9:32 AM · MITK (2012-09), Bugzilla
neuhaus added a comment to T3098: mitk::ImageStatisticsCalculator crash on selection of diffusion datasets.

If you are discussing it, please also assign it to one of you. If it needs to be discussed in the MITK meeting, please set the RFD keyword.

Aug 2 2016, 9:32 AM · Bugzilla, MITK
neuhaus added a comment to T3087: Selected items in PointListWidget does not get a blue selection color.

thats simple: the label numbers that the pointset mapper displays are wrong. The mappers should display the pointID... (IMHO)

Aug 2 2016, 9:32 AM · Bugzilla, MITK
neuhaus added a comment to T3087: Selected items in PointListWidget does not get a blue selection color.

That doesn't make sense, the PointIDs are not necessarily consecutive, PointIDs can be 5, 17, 55, 300,...

Aug 2 2016, 9:32 AM · Bugzilla, MITK
neuhaus added a comment to T3087: Selected items in PointListWidget does not get a blue selection color.

The PointListWidget does not count, it displays the PointID of the point.

Aug 2 2016, 9:32 AM · Bugzilla, MITK
neuhaus added a comment to T3071: Standardmultiwidgets.

What should we do with this bug?

Aug 2 2016, 9:32 AM · Bugzilla, MITK
neuhaus added a comment to T3073: Redesign mitkNavigationDataPlayerTest.

Adding class author and test author to cc list. Does anyone of you have time to look into this in one of the next bug squashing parties?

Aug 2 2016, 9:32 AM · Bugzilla, MITK
neuhaus added a comment to T3028: Add tooltips to icons in toolbar.

[SVN revision 20311]
FIX (#3028): add tool tips to icons in toolbar

Aug 2 2016, 9:31 AM · Bugzilla, MITK
neuhaus added a comment to T3028: Add tooltips to icons in toolbar.

need core modification

Aug 2 2016, 9:31 AM · Bugzilla, MITK
neuhaus added projects to T3028: Add tooltips to icons in toolbar: MITK, Bugzilla.
Aug 2 2016, 9:31 AM · Bugzilla, MITK
neuhaus added a comment to T3028: Add tooltips to icons in toolbar.

all icons have tooltips now.

Aug 2 2016, 9:31 AM · Bugzilla, MITK
neuhaus added a comment to T3023: Crash in Rigid Registration - Point Based Registration upon Register.

(In reply to comment #4)

Many of the logged messages seem to come from the segmentation module which was
most probably active at the same time...

I think the first combination has printed the error message for failed to
allocate memory to the console, maybe this can be changed to an message box?

Aug 2 2016, 9:31 AM · Bugzilla, MITK
neuhaus added a comment to T3023: Crash in Rigid Registration - Point Based Registration upon Register.

I can observe, that the registration uses a lot of memory. The MITK3M3.exe uses >3GB Ram, which would certainly throw a out-of-memory exception on a 32 Bit machine. This could be the source of the crash

Aug 2 2016, 9:31 AM · Bugzilla, MITK
neuhaus added a comment to T3023: Crash in Rigid Registration - Point Based Registration upon Register.

I tried again with x64 build, revision #20542. It does not crash anymore, the segmentation seems to be working correctly.

Aug 2 2016, 9:31 AM · Bugzilla, MITK
neuhaus added a comment to T3023: Crash in Rigid Registration - Point Based Registration upon Register.

did you press the register button in the RigidRegistration view?

Aug 2 2016, 9:31 AM · Bugzilla, MITK
neuhaus added a comment to T3023: Crash in Rigid Registration - Point Based Registration upon Register.

another try with the 32 Bit installer:

Aug 2 2016, 9:31 AM · Bugzilla, MITK
neuhaus added a comment to T3020: Crash in Deformable Registration upon Calculate Transformation.

needs to be reassigned to someone with a 32 Bit debug version.

Aug 2 2016, 9:31 AM · Bugzilla, MITK
neuhaus added a comment to T3020: Crash in Deformable Registration upon Calculate Transformation.

deformable registration with the two test images takes ~4.8 GB ram on my machine. This will lead certainly to an out of memory exception on 32 bit machines.

Aug 2 2016, 9:31 AM · Bugzilla, MITK
neuhaus added a comment to T3020: Crash in Deformable Registration upon Calculate Transformation.

Test with the 32 Bit installer (rev 20269):

Aug 2 2016, 9:31 AM · Bugzilla, MITK
neuhaus added a comment to T3013: Port Scanning for NDI Tracking devices.

[SVN revision 20281]
ENH (#3013): add TestConnection() method to check if a NDI tracking device responds at the current port/device.

Aug 2 2016, 9:31 AM · Bugzilla, MITK
neuhaus added a comment to T3013: Port Scanning for NDI Tracking devices.

SerialCommunication class should provide a list of serial port names that are exist on the computer. This needs to be implemented for windows, Unix and MacOS systems.

Aug 2 2016, 9:31 AM · Bugzilla, MITK
neuhaus added a comment to T3013: Port Scanning for NDI Tracking devices.

[SVN revision 20284]
ENH (#3013): allow scanning of COM1..COM9

Aug 2 2016, 9:31 AM · Bugzilla, MITK
neuhaus added projects to T3013: Port Scanning for NDI Tracking devices: MITK, Bugzilla.
Aug 2 2016, 9:31 AM · Bugzilla, MITK
neuhaus added a comment to T3009: Close Project Button.

[SVN revision 20310]
ENH (#3009): Add close project button

Aug 2 2016, 9:31 AM · Bugzilla, MITK
neuhaus added a comment to T3009: Close Project Button.

Yes, ext advisor is not in core. But the CloseProjectAction is in the core now.

Aug 2 2016, 9:31 AM · Bugzilla, MITK
neuhaus added projects to T3009: Close Project Button: MITK, Bugzilla.
Aug 2 2016, 9:31 AM · Bugzilla, MITK
neuhaus added a comment to T3009: Close Project Button.

need core modification, the new class is part of CoreUI.

Aug 2 2016, 9:31 AM · Bugzilla, MITK
neuhaus added a comment to T2996: Link to feedback form on welcome view and help pages.

[SVN revision 20419]
FIX (#2996): fix application name on title bar of help window

Aug 2 2016, 9:31 AM · Bugzilla, MITK
neuhaus added a comment to T2992: LevelWindow component should use the datamanager selection events.

I disagree. The layer property is invisible to the user and unintuitive to change. All other views process the data object that is selected in the data manager. Only the LevelWindow slider chooses its data object by other criteria. This is unintuitive for the user.

Aug 2 2016, 9:31 AM · Bugzilla, MITK
neuhaus added projects to T2992: LevelWindow component should use the datamanager selection events: MITK, Bugzilla.
Aug 2 2016, 9:31 AM · Bugzilla, MITK
neuhaus added a comment to T2978: Selecting a surface crashes app.

(In reply to comment #4)

Removing 3M3 keyword. This is not relevant as the property list is not
delivered with 3M3.

Aug 2 2016, 9:31 AM · Bugzilla, MITK