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Oct 31 2023
Oct 31 2023
s434n added a revision to T28990: MITK crashes when displaying GenericParamModel maps in the ModelFit Inspector View: Unknown Object (Differential Revision).
Oct 30 2023
Oct 30 2023
s434n committed rMITKa21ce061c2ff: set function string when creating generic param model parameterizer (authored by s434n).
set function string when creating generic param model parameterizer
s434n committed rMITKef92759cdfe9: set function string when creating generic param model parameterizer (authored by s434n).
set function string when creating generic param model parameterizer
Oct 27 2023
Oct 27 2023
floca moved T28499: Refactor/rewrite RegionGrowing3D tool from Backlog to MITK Meeting on the Request for Discussion board.
Oct 26 2023
Oct 26 2023
We should also have a look on eMITK plugins. Maybe not for that release, but for the next.
E.g. would the MRI tools make sense?
SUV would also be a candidate... may RT (but there we have to double check the state...
Fix MxN UI for MacOS
s434n closed T30192: [MxN] UI elements not visible on Mac as Resolved by committing rMITK0789330902a2: Fix MxN UI for MacOS.
fix UI position and size for MacOS
Pushed new branch to rMITK MITK: feature/T30231-monailabel-doku.
a178n added a revision to T30151: MONAI Label tool support CLICK interaction patterns: Unknown Object (Differential Revision).
a178n added a revision to T29295: MONAI Label App as auto-segmentation tool in MITK: Unknown Object (Differential Revision).
Oct 25 2023
Oct 25 2023
floca committed rMITKed4fb2550811: Added option to pass parameters to MatchImageMiniApp (authored by floca).
Added option to pass parameters to MatchImageMiniApp
removed wrong parameters (copyNpaste error)
floca committed rMITKc3283e082481: BREAKING Removed superfluous "MiniApp" suffix (authored by floca).
BREAKING Removed superfluous "MiniApp" suffix
floca committed rMITKb8a3d2391605: T30222 Add parameter feature to MatchImageMiniApp (authored by floca).
T30222 Add parameter feature to MatchImageMiniApp
Fixed review comments.
Deleted branch from rMITK MITK: bugfix/T30230-FixCppMicroServicesTestDriver.
kislinsk committed rMITKbf8885cb7049: Export symbols of test driver executable (authored by kislinsk).
Export symbols of test driver executable
kislinsk committed rMITKc7d1a7bb7dac: Merge branch 'bugfix/T30230-FixCppMicroServicesTestDriver' into develop (authored by kislinsk).
Merge branch 'bugfix/T30230-FixCppMicroServicesTestDriver' into develop
Pushed new branch to rMITK MITK: bugfix/T30230-FixCppMicroServicesTestDriver.
kislinsk renamed T30230: Fix CppMicroServices test on Linux from Fix CppMicroServices test on Ubutu to Fix CppMicroServices test on Linux.
Oct 24 2023
Oct 24 2023
floca added a project to T29454: Clarify the versions/editions we publish as installer: Request for Discussion.
So now we have to clarify the name for the bigger edition. And if we want to have just one extended edition or if we will in the end have it focused on topics. As we only have currently fitting stuf added.
In T29454#254381, @kompan wrote:NOT included will be (@floca as far is I understood these plugins were tailored for specific applications and are not really of interest to the users in general, correct? ):
- org.mitk.gui.qt.fit.demo
- org.mitk.gui.qt.pharmacokinetics.simulation
Oct 23 2023
Oct 23 2023
a178n triaged T30229: MONAI Label tool: Introduce time out parameter entry in Preferences as Normal priority.
a178n edited parent tasks for T29456: Datastore access facility in MONAILabel tool, added: T29192: [SEG] MONAI Label support in MITK Workbench; removed: T29295: MONAI Label App as auto-segmentation tool in MITK.
a178n edited parent tasks for T30151: MONAI Label tool support CLICK interaction patterns, added: T29192: [SEG] MONAI Label support in MITK Workbench; removed: T29295: MONAI Label App as auto-segmentation tool in MITK.
a178n renamed T30151: MONAI Label tool support CLICK interaction patterns from MONAI Label tool support other interaction patterns to MONAI Label tool support CLICK interaction patterns.
Oct 20 2023
Oct 20 2023
s434n added a revision to T30192: [MxN] UI elements not visible on Mac: Unknown Object (Differential Revision).
Rework concentration via VFA calculation.
kompan committed rMITK0b87fcd6dbb9: Update documentation of concentration converter plugin. (authored by kompan).
Update documentation of concentration converter plugin.
kompan committed rMITK8ba706196b03: Update Plugin-Vendor and Plugin-ContactAddress in manifest_headers.cmake. (authored by kompan).
Update Plugin-Vendor and Plugin-ContactAddress in manifest_headers.cmake.
Change initialization order.
kompan committed rMITK7851e8afc722: Update documentation for concentration curve converter view. (authored by kompan).
Update documentation for concentration curve converter view.
kompan committed rMITK85de3250c276: Apply the same changes to MRPerfusionView as for… (authored by kompan).
Apply the same changes to MRPerfusionView as for…
kompan committed rMITK28999fe8945d: Check before the conversion if the variables were initialized by the user. (authored by kompan).
Check before the conversion if the variables were initialized by the user.
kompan committed rMITK0b3d514a1d43: Minor correction regarding decimal number. (authored by kompan).
Minor correction regarding decimal number.
kompan committed rMITK4770de677c17: Initialize all variable set by the user to NaN. (authored by kompan).
Initialize all variable set by the user to NaN.
kompan committed rMITK0633ae0e4599: Const correctness in mitkConvertToConcentrationViaT1Functor. (authored by kompan).
Const correctness in mitkConvertToConcentrationViaT1Functor.
kompan committed rMITKea09b917e043: Use explicit c++ conversions instead of implicit c conversions in… (authored by kompan).
Use explicit c++ conversions instead of implicit c conversions in…
kompan committed rMITK7b0f715d9d0d: Initialize m_RepetitionTime in the ConcentrationCurveGenerator constructor. (authored by kompan).
Initialize m_RepetitionTime in the ConcentrationCurveGenerator constructor.
kompan committed rMITKb55b2ac41413: Adapt concentration conversion unit test to changes in VFA method. (authored by kompan).
Adapt concentration conversion unit test to changes in VFA method.
kompan committed rMITKe46aa60c931e: Minor correction, remove unnecessary MITK_INFO lines. (authored by kompan).
Minor correction, remove unnecessary MITK_INFO lines.
kompan committed rMITK3ce3ad1c19e6: Rename Variable Flip Angle Parameters box. (authored by kompan).
Rename Variable Flip Angle Parameters box.
kompan committed rMITKaec21bcba0c5: Make baseline averaging available for all conversion methods for 4D images. (authored by kompan).
Make baseline averaging available for all conversion methods for 4D images.
Rework concentration via VFA calculation.
Oct 19 2023
Oct 19 2023
TotalSegmentator v2 compatibility changes
a178n committed rMITK586481d0ec30: Totalsegmentator documentation update for v2 (authored by a178n).
Totalsegmentator documentation update for v2
a178n committed rMITK3c75a3fb1b19: Totalsegmentator install packages update for v2 (authored by a178n).
Totalsegmentator install packages update for v2
a178n committed rMITK36f19e73bbfe: Totalsegmentator label list parsing update for v2 (authored by a178n).
Totalsegmentator label list parsing update for v2
a178n committed rMITK8e3186f5f139: Adding progress bar to Totalsegmentator tool (authored by a178n).
Adding progress bar to Totalsegmentator tool
Totalsegmentator minor code update
TotalSegmentator v2
Oct 18 2023
Oct 18 2023
s434n committed rMITKbd73eba1caa9: Add safeguard to avoid MxN crashes when removing node (authored by s434n).
Add safeguard to avoid MxN crashes when removing node
s434n committed rMITKc5478047dbac: add safeguard to setGeometry of RenderWindowUtilityWidget (authored by s434n).
add safeguard to setGeometry of RenderWindowUtilityWidget
At the moment it is not very elegant to generate plugin-dependencies just for the documentation. And this solution also does't allow for having references in two-ways between plugins (refer plugin B in plugin A and vice versa). A different approach could be an additional entry in the manifest_header.cmake just for documentation dependecies or to take all references into account for all plugins.
a178n closed T30220: SAM tool: Custom NRRD writer not working as expected in Ubuntu, a subtask of T29524: SAM in MITK, as Resolved.
Oct 17 2023
Oct 17 2023
For the bigger MITK Workbench version of the 2023.10 release it is planned to include Pharmacokinetics (Perfusion, PET) and ModelFit.
Specifically, the following plugins will be included:
Oct 13 2023
Oct 13 2023
Pushed new branch to rMITK MITK: feature/T30222-MatchImageMiniApp_add_parameter_support.
SAM tool user documentation first draft
Update SAM tool documentation
Update SAM doku
Update SAM tool doku
SAM tool user documentation
SAM backend changes backup
Segment Anything Tool initial commit
Negative clicks Ahoy!
SAM tool UI & backend code changes
a178n committed rMITK0a67fe3839d8: Merge branch 'develop' into feature/T29540-sam-2d-tool (authored by a178n).
Merge branch 'develop' into feature/T29540-sam-2d-tool
Adding checks to avoid clicks outside image
code update with time measurement
a178n committed rMITKdf6fef94a552: Merge branch 'develop' into feature/T29540-sam-2d-tool (authored by a178n).
Merge branch 'develop' into feature/T29540-sam-2d-tool
SAM tool with daemon working changes
a178n committed rMITKe4f53fdcc0c1: Merge branch 'master' into feature/T29604-sam-tool-2 (authored by a178n).
Merge branch 'master' into feature/T29604-sam-tool-2
SAM tool working changes
SAM installer working changes
a178n committed rMITKbdb8197e2a24: Remove Interactive vs Auto radiobutton selection (authored by a178n).
Remove Interactive vs Auto radiobutton selection
Changing click point shape to filled CIRCLE
a178n committed rMITK3cdacd7db9b1: Migrating python related functionalities to dedicated class (authored by a178n).
Migrating python related functionalities to dedicated class
a178n committed rMITKe7a8aa8351fe: Migrating SAM tool install options into Pref menu: part changes (authored by a178n).
Migrating SAM tool install options into Pref menu: part changes
SAM Python class code refactoring
a178n committed rMITK34a7d3b3077e: Code cleanup: Installer & model selection not part of SAM GUI anymore (authored by a178n).
Code cleanup: Installer & model selection not part of SAM GUI anymore