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Maniphest T28275

[Segmentation] AdaptiveRegionGrowingTool must be refactored / 4D Segmentation returns error message when point is not on the correct timestep
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Description

Load 4D image
Go to region growing 3D
Add point
Run segmentation
Change timestep
Run segmentation again

--> Error message

pointset.PNG (1×2 px, 176 KB)

Windows Release Installer

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Event Timeline

thomass triaged this task as High priority.Feb 4 2021, 2:48 PM
thomass created this task.
thomass added a parent task: T28000: MITK v2021.02.

Probably it would just help to replace the MITK Error by a warning? This is also done when there is no point set at all.

floca added a subscriber: floca.Feb 4 2021, 8:00 PM

Oh fudge.... I totally have overlooked the tool. 😱

floca claimed this task.Feb 4 2021, 8:01 PM
floca edited projects, added MITK, Next Milestone; removed MITK (v2021.02).Feb 4 2021, 10:33 PM

The tool is a mess. Overhaul for this is not realistic. I deactivate the tool for dynamic images as a quick fix. I will reactivate it after rework.

floca renamed this task from [Segmentation] 4D Segmentation returns error message when point is not on the correct timestep to [Segmentation] AdaptiveRegionGrowingTool must be refactored / 4D Segmentation returns error message when point is not on the correct timestep.Feb 4 2021, 10:34 PM
floca removed a parent task: T28000: MITK v2021.02.
kislinsk mentioned this in rMITK3c263d7d6a5e: Release quickfix for T28275.Feb 10 2021, 5:49 PM
floca edited projects, added MITK (v2021.10); removed Next Milestone, MITK.Apr 7 2021, 10:55 AM
floca added a parent task: T27872: [Segmentation] Region Growing 3D GUI does not provide a "Overwrite" checkbox.Apr 7 2021, 9:37 PM
floca moved this task from Backlog to Segmentation on the MITK (v2021.10) board.Apr 7 2021, 9:42 PM
floca moved this task from Segmentation to Cycle on the MITK (v2021.10) board.
floca mentioned this in T27872: [Segmentation] Region Growing 3D GUI does not provide a "Overwrite" checkbox.May 5 2021, 8:42 PM
kalali mentioned this in T28479: [Segmentation] Rethink / reevaluate our existing segmentation tools / algorithms.May 6 2021, 10:48 AM
floca added a parent task: T28499: Refactor/rewrite RegionGrowing3D tool.Mon, May 24, 10:38 AM
floca added subtasks: T28523: Evaluate MITK segmentation survey, T28524: Refactor LabelSetImage and associated classes., T27437: Migrate MITK to use ITK 5.x .Fri, Jun 4, 7:09 PM
floca moved this task from Cycle to Segmentation on the MITK (v2021.10) board.Sun, Jun 6, 8:27 PM
floca moved this task from Segmentation to Cycle on the MITK (v2021.10) board.
MITK · MIC · CAMI · DKFZ