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Mar 28 2022

kislinsk added a comment to T29075: 2022 Week 17 (Very Late April).

Pushed new branch to rMITK MITK: release/T29075-v2022.04.

Mar 28 2022, 4:05 PM · MITK-ProjectTemplate, MITK
kislinsk triaged T29075: 2022 Week 17 (Very Late April) as Normal priority.
Mar 28 2022, 4:03 PM · MITK-ProjectTemplate, MITK
kislinsk created an object: MITK v2022.04.
Mar 28 2022, 4:03 PM
kislinsk closed T28777: Resetting Standard Multi Widget preferences leads to other colors than the default ones as Resolved.

It is not worth currently to spend much time on this so I fixed it as fast as possible by syncing the default colors instead of creating a single source of truth. This code location was barely touched in the past decade and I don't see why this would receive suddenly much more attention than that.

Mar 28 2022, 3:51 PM · MITK (v2022.04), Checklist
kislinsk added a comment to T28777: Resetting Standard Multi Widget preferences leads to other colors than the default ones.

Deleted branch from rMITK MITK: bugfix/T28777-DefaultDecorationColors.

Mar 28 2022, 3:47 PM · MITK (v2022.04), Checklist
kislinsk committed rMITKbaf3e152af36: Sync default colors with actual default colors of render windows (authored by kislinsk).
Sync default colors with actual default colors of render windows
Mar 28 2022, 3:47 PM
kislinsk committed rMITK59230e65e85e: Merge branch 'bugfix/T28777-DefaultDecorationColors' into develop (authored by kislinsk).
Merge branch 'bugfix/T28777-DefaultDecorationColors' into develop
Mar 28 2022, 3:47 PM
kislinsk added a comment to T28777: Resetting Standard Multi Widget preferences leads to other colors than the default ones.

Pushed new branch to rMITK MITK: bugfix/T28777-DefaultDecorationColors.

Mar 28 2022, 3:46 PM · MITK (v2022.04), Checklist
kislinsk claimed T28777: Resetting Standard Multi Widget preferences leads to other colors than the default ones.

Also, as reported by @s434n , the decoration colors in the Image Navigator only update after there was a render window update / click in one of the render windows.

Mar 28 2022, 1:42 PM · MITK (v2022.04), Checklist
kislinsk closed T29072: Fix various minor segmentation issues as Resolved.
Mar 28 2022, 11:21 AM · Checklist, MITK (v2022.04)
kislinsk added a comment to T29072: Fix various minor segmentation issues.

Deleted branch from rMITK MITK: bugfix/T29072-VariousSegmentationViewFixes.

Mar 28 2022, 11:21 AM · Checklist, MITK (v2022.04)
kislinsk committed rMITK3950e50ce615: Remove the MergeLabel action (authored by kislinsk).
Remove the MergeLabel action
Mar 28 2022, 11:20 AM
kislinsk committed rMITK94cbe62d330a: Disable layers and labels widgets on invalid selection input (authored by kislinsk).
Disable layers and labels widgets on invalid selection input
Mar 28 2022, 11:20 AM
kislinsk committed rMITK995c4ae77b9e: Remove actions from context menu that are not implemented (authored by kislinsk).
Remove actions from context menu that are not implemented
Mar 28 2022, 11:20 AM
kislinsk committed rMITK559c27a206f3: Fix typo (authored by kislinsk).
Fix typo
Mar 28 2022, 11:20 AM
kislinsk committed rMITK93f407b29929: Fix Ctrl select of Labels (authored by kislinsk).
Fix Ctrl select of Labels
Mar 28 2022, 11:20 AM
kislinsk committed rMITK2c9d02f88ed2: Merge branch 'bugfix/T29072-VariousSegmentationViewFixes' into develop (authored by kislinsk).
Merge branch 'bugfix/T29072-VariousSegmentationViewFixes' into develop
Mar 28 2022, 11:20 AM
kislinsk updated the task description for T29072: Fix various minor segmentation issues.
Mar 28 2022, 11:16 AM · Checklist, MITK (v2022.04)
kislinsk updated the task description for T29072: Fix various minor segmentation issues.
Mar 28 2022, 10:28 AM · Checklist, MITK (v2022.04)
kislinsk updated the task description for T29072: Fix various minor segmentation issues.
Mar 28 2022, 10:12 AM · Checklist, MITK (v2022.04)
kislinsk added a comment to T29072: Fix various minor segmentation issues.

Pushed new branch to rMITK MITK: bugfix/T29072-VariousSegmentationViewFixes.

Mar 28 2022, 10:11 AM · Checklist, MITK (v2022.04)
kislinsk triaged T29072: Fix various minor segmentation issues as Normal priority.
Mar 28 2022, 9:56 AM · Checklist, MITK (v2022.04)
kislinsk closed T29070: Create (smoothed) polygon model crashes as Resolved.
Mar 28 2022, 9:27 AM · Checklist, MITK (v2022.04)
kislinsk added a comment to T29070: Create (smoothed) polygon model crashes.

Deleted branch from rMITK MITK: bugfix/T29070-CreatePolygonModelCrashes.

Mar 28 2022, 9:25 AM · Checklist, MITK (v2022.04)
kislinsk committed rMITK87fabf7d8c97: Fix recursive destruction of NonBlockingAlgorithm (authored by kislinsk).
Fix recursive destruction of NonBlockingAlgorithm
Mar 28 2022, 9:25 AM
kislinsk committed rMITK4419428d88d2: Merge branch 'bugfix/T29070-CreatePolygonModelCrashes' into develop (authored by kislinsk).
Merge branch 'bugfix/T29070-CreatePolygonModelCrashes' into develop
Mar 28 2022, 9:25 AM
kislinsk added a comment to T29070: Create (smoothed) polygon model crashes.

Pushed new branch to rMITK MITK: bugfix/T29070-CreatePolygonModelCrashes.

Mar 28 2022, 9:24 AM · Checklist, MITK (v2022.04)
kislinsk triaged T29070: Create (smoothed) polygon model crashes as High priority.
Mar 28 2022, 9:21 AM · Checklist, MITK (v2022.04)

Mar 25 2022

kislinsk triaged T29060: [Segmentation] Glitch in label color after 3d-interpolation as Normal priority.
Mar 25 2022, 11:14 AM · MITK (v2023.04), Checklist
kislinsk removed a member for MIC: j562r.
Mar 25 2022, 9:49 AM
kislinsk removed a member for MIC: reicht.
Mar 25 2022, 9:45 AM

Mar 24 2022

kislinsk removed a member for BMC: Unknown Object (User).
Mar 24 2022, 4:55 PM
kislinsk removed a member for Kaapana (internal): Unknown Object (User).
Mar 24 2022, 4:54 PM
kislinsk added a member for Kaapana (internal): kaapana-ci.
Mar 24 2022, 1:59 PM
kislinsk removed a member for Kaapana (internal): Unknown Object (User).
Mar 24 2022, 1:57 PM

Mar 23 2022

kislinsk closed T29046: 2022 Week 12 (Late March) as Resolved.
Mar 23 2022, 10:10 PM · MITK-ProjectTemplate, MITK
kislinsk edited the content of Changelog.
Mar 23 2022, 10:10 PM · MITK
kislinsk added a comment to T29046: 2022 Week 12 (Late March).

Deleted branch from rMITK MITK: release/T29046-2022-Week-12.

Mar 23 2022, 10:09 PM · MITK-ProjectTemplate, MITK
kislinsk committed rMITKd2734d8c2bed: Merge branch 'master' into develop (authored by kislinsk).
Merge branch 'master' into develop
Mar 23 2022, 10:08 PM
kislinsk committed rMITKd4573cedc319: 2022 Week 12 (Late March) (authored by kislinsk).
2022 Week 12 (Late March)
Mar 23 2022, 10:08 PM
kislinsk edited the content of 2022 Week 12 (Late March).
Mar 23 2022, 9:58 PM
kislinsk added a comment to T27745: [MITKDoc] Revise Model Fit Generic View Documentation.

Is this task completely resolved?

Mar 23 2022, 8:32 PM · MITK (v2022.04)
kislinsk added a comment to T29046: 2022 Week 12 (Late March).

Pushed new branch to rMITK MITK: release/T29046-2022-Week-12.

Mar 23 2022, 11:24 AM · MITK-ProjectTemplate, MITK
kislinsk triaged T29046: 2022 Week 12 (Late March) as Normal priority.
Mar 23 2022, 11:22 AM · MITK-ProjectTemplate, MITK

Mar 22 2022

kislinsk edited the content of 2022 Week 12 (Late March).
Mar 22 2022, 9:33 PM
kislinsk closed T29045: Let unusable segmentation tools disappear and see if they will be missed as Resolved.
Mar 22 2022, 9:30 PM · MITK (v2022.04)
kislinsk added a comment to T29045: Let unusable segmentation tools disappear and see if they will be missed.

Deleted branch from rMITK MITK: bugfix/T29045-OperationNothingToSeeHere.

Mar 22 2022, 9:30 PM · MITK (v2022.04)
kislinsk committed rMITKa6e9dd7482e3: Remove tool buttons for Fast Marching and Watershed (authored by kislinsk).
Remove tool buttons for Fast Marching and Watershed
Mar 22 2022, 9:30 PM
kislinsk committed rMITKcf7f3935c4b6: Merge branch 'bugfix/T29045-OperationNothingToSeeHere' into develop (authored by kislinsk).
Merge branch 'bugfix/T29045-OperationNothingToSeeHere' into develop
Mar 22 2022, 9:30 PM
kislinsk added a comment to T29045: Let unusable segmentation tools disappear and see if they will be missed.

Pushed new branch to rMITK MITK: bugfix/T29045-OperationNothingToSeeHere.

Mar 22 2022, 9:29 PM · MITK (v2022.04)
kislinsk triaged T29045: Let unusable segmentation tools disappear and see if they will be missed as Normal priority.
Mar 22 2022, 9:09 PM · MITK (v2022.04)
kislinsk closed T29041: Create icon for nnUnet segmentation tool as Resolved.
Mar 22 2022, 11:01 AM · MITK (v2022.04)
kislinsk added a comment to T29041: Create icon for nnUnet segmentation tool.

Deleted branch from rMITK MITK: feature/T29041-nnUnetIcon.

Mar 22 2022, 11:01 AM · MITK (v2022.04)
kislinsk committed rMITK23e8298f5f1a: Add icon for nnUnet segmentation tool (authored by kislinsk).
Add icon for nnUnet segmentation tool
Mar 22 2022, 11:00 AM
kislinsk committed rMITKe756d2d71435: Merge branch 'feature/T29041-nnUnetIcon' into develop (authored by kislinsk).
Merge branch 'feature/T29041-nnUnetIcon' into develop
Mar 22 2022, 11:00 AM
kislinsk added a comment to T29041: Create icon for nnUnet segmentation tool.

Pushed new branch to rMITK MITK: feature/T29041-nnUnetIcon.

Mar 22 2022, 10:59 AM · MITK (v2022.04)
kislinsk triaged T29041: Create icon for nnUnet segmentation tool as Wishlist priority.
Mar 22 2022, 10:57 AM · MITK (v2022.04)
kislinsk created an object: 2022 Week 12 (Late March).
Mar 22 2022, 10:32 AM

Mar 20 2022

kislinsk added a revision to T28464: [Segmentation] New Add/Remove tool: Unknown Object (Differential Revision).
Mar 20 2022, 11:16 AM · MITK (v2022.10)
kislinsk added a revision to T28464: [Segmentation] New Add/Remove tool: Unknown Object (Differential Revision).
Mar 20 2022, 11:10 AM · MITK (v2022.10)
kislinsk closed T29040: Fix unit tests that fail since T29038 as Resolved.

Tagged with Breaking Change, although the actual breaking change is the update to VTK 9.1 since the formulas in vtkCurvature changed.

Mar 20 2022, 11:08 AM · Breaking Change, MITK (v2022.04)
kislinsk added a comment to T29040: Fix unit tests that fail since T29038.

Deleted branch from rMITK MITK: bugfix/T29040-FixUnitTests.

Mar 20 2022, 11:07 AM · Breaking Change, MITK (v2022.04)
kislinsk committed rMITK9ebba8935833: Adapt expected values to improved vtkCurvature calculations (authored by kislinsk).
Adapt expected values to improved vtkCurvature calculations
Mar 20 2022, 11:06 AM
kislinsk committed rMITK4c1e59912ae6: Fix distinction between double and int (authored by kislinsk).
Fix distinction between double and int
Mar 20 2022, 11:06 AM
kislinsk committed rMITKa0a3a944a258: Merge branch 'bugfix/T29040-FixUnitTests' into develop (authored by kislinsk).
Merge branch 'bugfix/T29040-FixUnitTests' into develop
Mar 20 2022, 11:06 AM

Mar 19 2022

kislinsk updated the task description for T29040: Fix unit tests that fail since T29038.
Mar 19 2022, 1:36 PM · Breaking Change, MITK (v2022.04)
kislinsk added a comment to T29040: Fix unit tests that fail since T29038.

Pushed new branch to rMITK MITK: bugfix/T29040-FixUnitTests.

Mar 19 2022, 12:36 PM · Breaking Change, MITK (v2022.04)
kislinsk triaged T29040: Fix unit tests that fail since T29038 as Normal priority.
Mar 19 2022, 12:33 PM · Breaking Change, MITK (v2022.04)
kislinsk added a comment to T29038: Make MITK compatible to GCC 11 and raise C++ standard to 17.

Deleted branch from rMITK MITK: feature/T29038-GCC-11.

Mar 19 2022, 10:33 AM · MITK (v2022.04)
kislinsk committed rMITK1ad7142887d4: Upgrade GDCM from version 3.0.8 to 3.0.10 (authored by kislinsk).
Upgrade GDCM from version 3.0.8 to 3.0.10
Mar 19 2022, 10:32 AM
kislinsk committed rMITK19bb3dd9a1fc: Upgrade JsonCpp to version 1.9.5 (authored by kislinsk).
Upgrade JsonCpp to version 1.9.5
Mar 19 2022, 10:32 AM
kislinsk committed rMITK2f6336c976b5: Upgrade VTK from version 9.0.1 to 9.1.0 (authored by kislinsk).
Upgrade VTK from version 9.0.1 to 9.1.0
Mar 19 2022, 10:32 AM
kislinsk committed rMITK8272740f2c3b: Fix new GCC 11 warnings (authored by kislinsk).
Fix new GCC 11 warnings
Mar 19 2022, 10:32 AM
kislinsk committed rMITK3884b649b31e: Fix bogus clang warning (authored by kislinsk).
Fix bogus clang warning
Mar 19 2022, 10:32 AM
kislinsk committed rMITKd6588b5ddbfe: Restrict pragma to clang (authored by kislinsk).
Restrict pragma to clang
Mar 19 2022, 10:32 AM
kislinsk committed rMITKa991a7a951aa: Remove legacy include of vtkConfigure.h (authored by kislinsk).
Remove legacy include of vtkConfigure.h
Mar 19 2022, 10:32 AM
kislinsk committed rMITKe3346fae6814: Tell VTK to not use GLVND (authored by kislinsk).
Tell VTK to not use GLVND
Mar 19 2022, 10:32 AM
kislinsk committed rMITKb54c8d676d1d: Replace deprecated vtkOpenGL header (authored by kislinsk).
Replace deprecated vtkOpenGL header
Mar 19 2022, 10:32 AM
kislinsk committed rMITKda2301e53df4: Switch from C++14 to C++17 (authored by kislinsk).
Switch from C++14 to C++17
Mar 19 2022, 10:32 AM
kislinsk committed rMITK1f09155c5ee9: Upgrade OpenCV from version 3.4.8 to 3.4.16 (authored by kislinsk).
Upgrade OpenCV from version 3.4.8 to 3.4.16
Mar 19 2022, 10:32 AM
kislinsk committed rMITKb0e61455b187: Upgrade Eigen to version 3.4.0 for C++17 compatibility (authored by kislinsk).
Upgrade Eigen to version 3.4.0 for C++17 compatibility
Mar 19 2022, 10:32 AM
kislinsk committed rMITK7c908a74872b: Remove deprecated register keyword in ANN (authored by kislinsk).
Remove deprecated register keyword in ANN
Mar 19 2022, 10:32 AM
kislinsk committed rMITKdc90d5c9a35e: Remove deprecated exception specification in Vigra (authored by kislinsk).
Remove deprecated exception specification in Vigra
Mar 19 2022, 10:32 AM
kislinsk committed rMITKa735f9dfe740: Partly revert code removal (authored by kislinsk).
Partly revert code removal
Mar 19 2022, 10:32 AM
kislinsk committed rMITK5060c18c8e46: Remove deprecated register keyword from Vigra (authored by kislinsk).
Remove deprecated register keyword from Vigra
Mar 19 2022, 10:32 AM
kislinsk committed rMITK610e9b2d649a: Fix semicolons in CMAKE_ARGS (authored by kislinsk).
Fix semicolons in CMAKE_ARGS
Mar 19 2022, 10:32 AM
kislinsk committed rMITKfa451f787558: Replace deprecated std::random_shuffle with std::shuffle in Vigra (authored by kislinsk).
Replace deprecated std::random_shuffle with std::shuffle in Vigra
Mar 19 2022, 10:32 AM
kislinsk committed rMITK530a48122bcb: Delete register keyword (authored by kislinsk).
Delete register keyword
Mar 19 2022, 10:32 AM
kislinsk committed rMITK07b869b6ee15: Generalize C++ standard specification (authored by kislinsk).
Generalize C++ standard specification
Mar 19 2022, 10:32 AM
kislinsk committed rMITK6eae25e50c7d: Make MITK compatible to GCC 11, upgrade GCDM, VTK, OpenCV, Eigen, and raise C++… (authored by kislinsk).
Make MITK compatible to GCC 11, upgrade GCDM, VTK, OpenCV, Eigen, and raise C++…
Mar 19 2022, 10:32 AM
kislinsk closed T29038: Make MITK compatible to GCC 11 and raise C++ standard to 17 as Resolved by committing rMITK6eae25e50c7d: Make MITK compatible to GCC 11, upgrade GCDM, VTK, OpenCV, Eigen, and raise C++….
Mar 19 2022, 10:32 AM · MITK (v2022.04)

Mar 17 2022

kislinsk updated the task description for T29038: Make MITK compatible to GCC 11 and raise C++ standard to 17.
Mar 17 2022, 10:10 PM · MITK (v2022.04)
kislinsk renamed T29038: Make MITK compatible to GCC 11 and raise C++ standard to 17 from Make MITK compatible to GCC 11 to Make MITK compatible to GCC 11 and raise C++ standard to 17.
Mar 17 2022, 10:07 PM · MITK (v2022.04)
kislinsk triaged T28982: Weak Label Annotation Picking Tool as Normal priority.
Mar 17 2022, 10:54 AM · MITK (v2022.10), Request for Discussion
kislinsk triaged T29000: [Otsu/Watershed Bug] Time points skipped while browsing segmentation Preview as Normal priority.
Mar 17 2022, 10:53 AM · Missing Info, MITK
kislinsk added a comment to T29038: Make MITK compatible to GCC 11 and raise C++ standard to 17.

After a few iterations, D612 seems to build on all clients (Windows still building, takes ages). Next step is to check why at least on Fedora the loader isn't able to load VTK libraries. Checking with LD_DEBUG=libs revealed that the search paths are missing the actual path ep/lib64 but instead look in /ep/lib64 and many strange relative paths like ep/lib64/../...

Mar 17 2022, 10:30 AM · MITK (v2022.04)
kislinsk triaged T29025: Preference service (access) based on cpp microservices as Normal priority.

I would suggest to:

  1. Implement the preferences backend on module level as a micro service
  2. Keep the BlueBerry API as-is but use the new backend
Mar 17 2022, 10:23 AM · MITK (v2023.04), Breaking Change
kislinsk added a comment to T29038: Make MITK compatible to GCC 11 and raise C++ standard to 17.

At the current state the MitkWorkbench configuration should be probably buildable. As far as I understood, I had a bogus warning handled as error at 99% that I fixed with a warning exception in the top-level CMakeLists.txt, causing everything to rebuild. Since the build in my VM takes quite a while I call it a day. I already created D612 to have some feedback from the build clients available soon.

Mar 17 2022, 1:32 AM · MITK (v2022.04)
kislinsk added a revision to T29038: Make MITK compatible to GCC 11 and raise C++ standard to 17: Unknown Object (Differential Revision).
Mar 17 2022, 1:27 AM · MITK (v2022.04)
kislinsk added a comment to T29038: Make MITK compatible to GCC 11 and raise C++ standard to 17.

Pushed new branch to rMITK MITK: feature/T29038-GCC-11.

Mar 17 2022, 1:22 AM · MITK (v2022.04)
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