As suggested in the MITK mailinglist, one approach would be switching to cppMicroServices 3.x https://sourceforge.net/p/mitk/mailman/message/35879160/

@nolden, looks better (http://sidt-hpc3/view/MITK-PRE-MASTER/job/MPC_ninja/build_type=Debug,matrixBuildNinja=macOS_13_Beta_XC9/2/console), but now we ran into this issue already mentioned here T22929: Atomic operations API used in CppMicroServices are deprecated in macOS Sierra 10.12.5.

@nolden changes can be committed beforehand into this MITK branch T23248-test-with-latest-master which has fixes so that DCMTK compiles on macOS with Clang.

Pushed new branch T23248-test-with-latest-master.

Pushed new branch T23302-sourcecode-fixes-for-clang-compatibility.

Will do. I had lots of time in the train to fix the Utility functions. Will upload them to this branch and then we can check -additionally to your fixes- what would be useful to include into master.

In File RegGrow.c this error is thrown:

fixing approach, from

seems like this only occurs when using the upload context menu in Datamanager. When using upload button I could not recall this issue.

On windows steps 2 and 3 are still needed because an error is thrown otherwise. Please note, that this was tested on DIPP2017029000. My tests on OSX were performed on a newer MITK master branch.

@kislinsk @nolden: there are quite some warnings thrown from clang. An overview of warning types see Section "Details" -> Reiter Categories using this link

There are some warnings about depricated calls in CppMicroServices and QmitkRenderWindowMenu

QmitkRenderWindowMenu.h
usThreads_p.h

This error is thrown when building DCMTK 3.6.2 release on OSX with latest CLang

Jenkins jobs for this branch are setup for macOS 10.13 XCode8 and XCode9 Beta
see http://193.174.63.171 (accessible only within DKFZ infrastructure)

Pushed new branch T23248-BuildFixes4macOS1013.

additional patch in ITK-4.11.0.patch

Error building ITK:

ep/src/ITK/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg/lsqrBase.cxx:565:14: error: ordered comparison between pointer and zero ('std::ostream *' (aka 'basic_ostream<char> *') and 'int')
    if (nout > 0)

building on MITK master commit:
commit b5db5896a6b7bc8a40752927c1c07f137a4f27ce

Tested proof of concept of this task while working on this task T23244: Xnat plugin: easy to use nrrd upload after DICOM import.

Step 2 and 3 can already be skipped. Tested on OSX using latest MITK master build. Need to verify on Windows and with a collaborating radiologist.

Installed

• Qt 5.9.1
• CMake 3.9.1
• ninja 1.7.1

Setup Machine with latest macOS 10.13 beta (Build 17A344b).

Works for me as well (OSX 10.11). However, current MITK master does not include the changes to dcmtk-3.6.1_20170228.tar.gz yet, to which @espak is referring to.

see T22775: DCMTK build fails with clang 7

Access and Login to XNAT via Webbrowser works
Viewing images on and downloading images from XNAT-Webportal did not work and caused a Java error (Exception that some JavaClass is missing although java is properly installed). Therefore the Webportal is of low interest.

• Installation of DIPP will work only on new PCs with 64 Bit Operating system (ev. use Notebook)
• Test MITK-XNAT plugin on site (contact Mr. Falk Gauss, IT Admin at Forensics Dept.)

resolving the address:

@nolden, tomorrow I will meet with Prof. Yen at forensics institute. If there is time left, XNAT-access via Webbrowser and MITK (DIPP with XNAT Plugin) testing can be performed.

A routine post-mortem CT scan successfully sent from Anatomy CT-scanner via CSI-HD datapipelines to XNAT (internet accessible XNAT) csi-hd project. Might be of interest for @thomass @nolden

Talked to @nolden if an XNAT instance can be provided which is accessible from the internet.