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Aug 2 2016

espak added projects to T18755: Pass down CMAKE_PREFIX_PATH to external projects: MITK, Bugzilla.
Aug 2 2016, 10:18 AM · Bugzilla, MITK
espak added projects to T18700: typo in nifti mimetype extensions: MITK, Bugzilla.
Aug 2 2016, 10:18 AM · MITK (2015-03), Bugzilla
espak added projects to T18677: inherits WorkbenchPart::AddPropertyListener via dominance: MITK, Bugzilla.
Aug 2 2016, 10:18 AM · Auto-closed, Bugzilla, MITK
espak added projects to T18612: Color context menu does not change "binaryimage.selectedcolor": MITK, Bugzilla.
Aug 2 2016, 10:17 AM · Bugzilla, MITK
espak added a comment to T18612: Color context menu does not change "binaryimage.selectedcolor".

https://github.com/NifTK/MITK/commit/da105b8f1ab18fef9a2851039ea2067e5bf2404c

Aug 2 2016, 10:17 AM · Bugzilla, MITK
espak added projects to T18608: command line arguments not quoted: MITK, Bugzilla.
Aug 2 2016, 10:17 AM · Bugzilla, MITK
espak added a comment to T18608: command line arguments not quoted.

Sorry, this is the right form:

Aug 2 2016, 10:17 AM · Bugzilla, MITK
espak added projects to T18609: Remove Movie Maker dependency on org.mitk.gui.qt.common.legacy: MITK, Bugzilla.
Aug 2 2016, 10:17 AM · Auto-closed, MITK, Bugzilla
espak added a comment to T18608: command line arguments not quoted.

https://github.com/NifTK/MITK/commit/e12d65dd0f012f1b517b167422c244a2f79634d8

Aug 2 2016, 10:17 AM · Bugzilla, MITK
espak added a comment to T18594: Department logo cannot be disabled.

https://github.com/NifTK/MITK/commit/7db746a015766c246cedb0cdbf65e20119ac36f5

Aug 2 2016, 10:17 AM · MITK (2015-03), Bugzilla
espak added projects to T18594: Department logo cannot be disabled: MITK, Bugzilla.
Aug 2 2016, 10:17 AM · MITK (2015-03), Bugzilla
espak added a comment to T18594: Department logo cannot be disabled.

I missed a parenthesis from the end.

Aug 2 2016, 10:17 AM · MITK (2015-03), Bugzilla
espak added projects to T18558: mitk::Tool::CreateEmptySegmentationNode input image constness: MITK, Bugzilla.
Aug 2 2016, 10:17 AM · Auto-closed, Bugzilla, MITK
espak added projects to T18554: accessTwoImagesByITK macros always put write lock on both input images: MITK, Bugzilla.
Aug 2 2016, 10:17 AM · Auto-closed, MITK, Bugzilla
espak added a comment to T18551: No header guards for QmitkAboutDialog.

https://github.com/NifTK/MITK/commit/56152c9a8e8f45c288c6059e78d6b3a0f8cd2555

Aug 2 2016, 10:17 AM · Bugzilla, MITK
espak added projects to T18551: No header guards for QmitkAboutDialog: MITK, Bugzilla.
Aug 2 2016, 10:17 AM · Bugzilla, MITK
espak added projects to T17988: Provide command line options to set initial data node properties: MITK, Bugzilla.
Aug 2 2016, 10:14 AM · Bugzilla, MITK
espak added projects to T17989: Provide command line options to set/override user preferences: MITK, Bugzilla.
Aug 2 2016, 10:14 AM · Bugzilla, MITK
espak added a comment to T17988: Provide command line options to set initial data node properties.

I close this as I could handle this in our application without modifying MITK.

Aug 2 2016, 10:14 AM · Bugzilla, MITK
espak added a comment to T17989: Provide command line options to set/override user preferences.

I close this as I could handle this in our application, without modifying MITK.

Aug 2 2016, 10:14 AM · Bugzilla, MITK
espak added projects to T17934: ImageWriteAccessor should ignore ReadAccessors with IgnoreLock option: MITK, Bugzilla.
Aug 2 2016, 10:13 AM · Bugzilla, MITK
espak added a comment to T17934: ImageWriteAccessor should ignore ReadAccessors with IgnoreLock option.

I put the patch upon the same pull request to avoid conflicts.

Aug 2 2016, 10:13 AM · Bugzilla, MITK
espak added a comment to T17931: ImageToItk should lock input image for reading if output image is const.

All good.
MITKCore compiles and tests pass on Mountain Lion with gcc 4.2.1 (default compiler).

Aug 2 2016, 10:13 AM · Bugzilla, MITK
espak added a comment to T17931: ImageToItk should lock input image for reading if output image is const.

Moreover, the AccessByType is not an ideal solution for 1 at all, because you need to write lots of wrapper functions that create an ImageToItk inside.

Aug 2 2016, 10:13 AM · Bugzilla, MITK
espak added a comment to T17931: ImageToItk should lock input image for reading if output image is const.

I have not noticed 15821, but I have started working on the same issue already.

Aug 2 2016, 10:13 AM · Bugzilla, MITK
espak added a comment to T17931: ImageToItk should lock input image for reading if output image is const.

Fair enough.

Aug 2 2016, 10:13 AM · Bugzilla, MITK
espak added a comment to T17931: ImageToItk should lock input image for reading if output image is const.

There are three things that you can do with the AccessByType macros but not with AccessByItk:

Aug 2 2016, 10:13 AM · Bugzilla, MITK
espak added a comment to T17931: ImageToItk should lock input image for reading if output image is const.

It implements the is_const and remove_const types if the compiler does not support C++ 11. This case works well. I have not tested it with a compiler *with* C++ 11, though.

Aug 2 2016, 10:13 AM · Bugzilla, MITK
espak added projects to T17931: ImageToItk should lock input image for reading if output image is const: MITK, Bugzilla.
Aug 2 2016, 10:13 AM · Bugzilla, MITK
espak added a comment to T17894: Focus moves to not visible window when a not focused renderer deleted.

You're welcome. Thanks for the merge and for the additional fixes.

Aug 2 2016, 10:13 AM · Bugzilla, MITK
espak added a comment to T17894: Focus moves to not visible window when a not focused renderer deleted.

The pull request is based on the current master and it has two commits, one for both issues. The solution for the second issue is a bit tricky, see the comment of the commit.

Aug 2 2016, 10:13 AM · Bugzilla, MITK
espak added projects to T17894: Focus moves to not visible window when a not focused renderer deleted: MITK, Bugzilla.
Aug 2 2016, 10:13 AM · Bugzilla, MITK
espak added projects to T17885: PointSetDataInteractor: all points disappear when removing one point: MITK, Bugzilla.
Aug 2 2016, 10:13 AM · Bugzilla, MITK
espak added a comment to T17885: PointSetDataInteractor: all points disappear when removing one point.

It's not #17725 but #17473.

Aug 2 2016, 10:13 AM · Bugzilla, MITK
espak added projects to T17886: Provide setters for InteractionPositionEvent: MITK, Bugzilla.
Aug 2 2016, 10:13 AM · Bugzilla, MITK
espak added a comment to T17830: DisplayGeometry origin changes unexpectedly when zooming.

I meant "... as panning the image instead of zooming".

Aug 2 2016, 10:12 AM · Bugzilla, MITK
espak added a comment to T17829: No way to specify renderer name for multiwidget, renderer specific properties won't work.

https://github.com/MITK/MITK/pull/65

Aug 2 2016, 10:12 AM · MITK (2014-06), Bugzilla
espak added projects to T17830: DisplayGeometry origin changes unexpectedly when zooming: MITK, Bugzilla.
Aug 2 2016, 10:12 AM · Bugzilla, MITK
espak added a comment to T17830: DisplayGeometry origin changes unexpectedly when zooming.

(In reply to Nils Lichtenberg from comment #4)

I could not reproduce the case that the origin changes while the scale
factor remains constant.

Aug 2 2016, 10:12 AM · Bugzilla, MITK
espak added a comment to T17830: DisplayGeometry origin changes unexpectedly when zooming.

https://github.com/MITK/MITK/pull/66

Aug 2 2016, 10:12 AM · Bugzilla, MITK
espak added a comment to T17828: QmitkDataStorageTreeModel is not 64 bit safe. DataTreeManager crashes on 64 Bit systems..

Duplicate of #17534 and #17755.

Aug 2 2016, 10:12 AM · Bugzilla, MITK
espak added projects to T17829: No way to specify renderer name for multiwidget, renderer specific properties won't work: MITK, Bugzilla.
Aug 2 2016, 10:12 AM · MITK (2014-06), Bugzilla
espak added a comment to T17812: SlicedGeometry3D initialisation fix for non-image geometries.

At the end I reverted this fix in our fork because it broke the MITK Display (stdmultiwidgeteditor), and we have that as well.

Aug 2 2016, 10:12 AM · Auto-closed, Bugzilla, MITK
espak added a comment to T17812: SlicedGeometry3D initialisation fix for non-image geometries.

If you use a non-image plane geometry to initialise a sliced geometry then it will be a non-image sliced geometry.

Aug 2 2016, 10:12 AM · Auto-closed, Bugzilla, MITK
espak added a comment to T17812: SlicedGeometry3D initialisation fix for non-image geometries.

For the previous comment:

Aug 2 2016, 10:12 AM · Auto-closed, Bugzilla, MITK
espak added a comment to T17812: SlicedGeometry3D initialisation fix for non-image geometries.

In our viewer the renderers have non image sliced geometries. As far as I see it from the MITK code, it is the same for the MITK display.

Aug 2 2016, 10:12 AM · Auto-closed, Bugzilla, MITK
espak added a comment to T17812: SlicedGeometry3D initialisation fix for non-image geometries.

I updated my fix to work on the last MITK release.

Aug 2 2016, 10:12 AM · Auto-closed, Bugzilla, MITK
espak added projects to T17778: mitk::DataNode::GetBoolProperty renderer constness: MITK, Bugzilla.
Aug 2 2016, 10:12 AM · Bugzilla, MITK
espak added a comment to T17778: mitk::DataNode::GetBoolProperty renderer constness.

I meant the call is delegated to GetProperty(...), but that is also fine.

Aug 2 2016, 10:12 AM · Bugzilla, MITK
espak added projects to T17777: Provide API to remove renderer specific property lists: MITK, Bugzilla.
Aug 2 2016, 10:12 AM · Bugzilla, MITK
espak added a comment to T17708: Change layout of detached windows.

But then, I guess, the other window would have its own menu bar, tool bar, status bar and so on.

Aug 2 2016, 10:12 AM · Bugzilla, MITK
espak added a comment to T17618: Incorrect origin for SlicedGeometry3D, shifted with half spacing.

Pull request sent:

Aug 2 2016, 10:11 AM · Bugzilla, MITK
espak added a comment to T17618: Incorrect origin for SlicedGeometry3D, shifted with half spacing.

The patch is here, by the way:

Aug 2 2016, 10:11 AM · Bugzilla, MITK
espak added projects to T17618: Incorrect origin for SlicedGeometry3D, shifted with half spacing: MITK, Bugzilla.
Aug 2 2016, 10:11 AM · Bugzilla, MITK
espak added a comment to T17618: Incorrect origin for SlicedGeometry3D, shifted with half spacing.

Any thoughts on this?

Aug 2 2016, 10:11 AM · Bugzilla, MITK
espak added a comment to T17618: Incorrect origin for SlicedGeometry3D, shifted with half spacing.

I have a patch that corrects this, but it caused other problems. The origin, centre and the corner points of the renderers matched, but the crosshair was not exactly in the middle of the voxels.

Aug 2 2016, 10:11 AM · Bugzilla, MITK
espak added a comment to T17534: Crash when drag-and-dropping data node on Win64.

I just tested it, and it works well now.
Thank you!

Aug 2 2016, 10:11 AM · MITK (2014-06), Bugzilla
espak added a comment to T17534: Crash when drag-and-dropping data node on Win64.

Any update on this?
We have been using the fix for a while now, it's tested on the three main platforms.
I'm trying to minimise the number of open tickets, and this seems to be an easy one.
Thanks.

Aug 2 2016, 10:11 AM · MITK (2014-06), Bugzilla
espak added a comment to T17534: Crash when drag-and-dropping data node on Win64.

https://github.com/MITK/MITK/pull/50

Aug 2 2016, 10:11 AM · MITK (2014-06), Bugzilla
espak added a comment to T17534: Crash when drag-and-dropping data node on Win64.

17828 is another duplicate.

Aug 2 2016, 10:11 AM · MITK (2014-06), Bugzilla
espak added projects to T17534: Crash when drag-and-dropping data node on Win64: MITK, Bugzilla.
Aug 2 2016, 10:11 AM · MITK (2014-06), Bugzilla
espak added a comment to T17473: mitkPointSetVtkMapper2D crash, assertion fails.

I mark it as invalid, as this was already fixed by Sandy on 2013.10.30. Unfortunately, our fork was based on a commit from two weeks before. Moreover, I our fix was not complete, the " ls->m_PropAssembly->VisibilityOff();" line was missing that caused that the last point stayed visible on the screen.

Aug 2 2016, 10:11 AM · Bugzilla, MITK
espak added a comment to T17473: mitkPointSetVtkMapper2D crash, assertion fails.

Pull request sent:
https://github.com/MITK/MITK/pull/48

Aug 2 2016, 10:11 AM · Bugzilla, MITK
espak added a comment to T17473: mitkPointSetVtkMapper2D crash, assertion fails.

I discovered a bug that might be the consequence of the proposed fix.

Aug 2 2016, 10:11 AM · Bugzilla, MITK
espak added projects to T17473: mitkPointSetVtkMapper2D crash, assertion fails: MITK, Bugzilla.
Aug 2 2016, 10:11 AM · Bugzilla, MITK
espak added projects to T17447: MitkWorkbench 'No such slot' error: MITK, Bugzilla.
Aug 2 2016, 10:11 AM · Bugzilla, MITK
espak added a comment to T17447: MitkWorkbench 'No such slot' error.

I close this as it looks to be fixed.

Aug 2 2016, 10:11 AM · Bugzilla, MITK
espak added a comment to T17295: Enforce atomic state transitions in MITK Core classes.

I shared the test framework with a little unit test.

Aug 2 2016, 10:10 AM · Bugzilla, MITK
espak added a comment to T17295: Enforce atomic state transitions in MITK Core classes.

The pattern that worked for me:

Aug 2 2016, 10:10 AM · Bugzilla, MITK
espak added projects to T17295: Enforce atomic state transitions in MITK Core classes: MITK, Bugzilla.
Aug 2 2016, 10:10 AM · Bugzilla, MITK
espak added projects to T16895: Function to block signals from slice navigation controller: MITK, Bugzilla.
Aug 2 2016, 10:10 AM · Auto-closed, Bugzilla, MITK
espak added a comment to T16895: Function to block signals from slice navigation controller.

Any opinion about this?
Can it be merged, or should it stay on our fork?

Aug 2 2016, 10:10 AM · Auto-closed, Bugzilla, MITK
espak added a comment to T16895: Function to block signals from slice navigation controller.

Note that I also corrected a little mistake in the code:
I removed line 329 and 336 because they were in conflict with line 221 and 351.

Aug 2 2016, 10:10 AM · Auto-closed, Bugzilla, MITK
espak added projects to T16862: Disable repositioning region on window resize: MITK, Bugzilla.
Aug 2 2016, 10:10 AM · Bugzilla, MITK
espak added a comment to T16862: Disable repositioning region on window resize.

https://github.com/MITK/MITK/pull/43

Aug 2 2016, 10:10 AM · Bugzilla, MITK
espak added a comment to T16862: Disable repositioning region on window resize.

Please find the patch through the pull request above.

Aug 2 2016, 10:10 AM · Bugzilla, MITK
espak added a comment to T16803: Mac OSX 10.9 Maverick compatibility.

Thanks for all this!

Aug 2 2016, 10:10 AM · Bugzilla, MITK
espak added a comment to F1098: vtk-6.0.0.1-patch-1.diff.

VTK 6.0 patch for OS X 10.9

Aug 2 2016, 10:10 AM
espak added a comment to T16803: Mac OSX 10.9 Maverick compatibility.

Just a note.

Aug 2 2016, 10:10 AM · Bugzilla, MITK
espak added a comment to T16803: Mac OSX 10.9 Maverick compatibility.

VTK can be compiled with the patch attached.

Aug 2 2016, 10:10 AM · Bugzilla, MITK
espak added a comment to T16803: Mac OSX 10.9 Maverick compatibility.

VTK will need this patch to be built with XCode 5.1. Even VTK 6.1.

Aug 2 2016, 10:10 AM · Bugzilla, MITK
espak added a comment to T16803: Mac OSX 10.9 Maverick compatibility.

VTK 6.0 patch for OS X 10.9

Aug 2 2016, 10:10 AM · Bugzilla, MITK
espak added a comment to T16803: Mac OSX 10.9 Maverick compatibility.

You mean you merged VTK 6.1 to the master?
Will it be part of the March release?

Aug 2 2016, 10:10 AM · Bugzilla, MITK
espak added a comment to T16776: Pass selected Mac OS X SDK to subprojects.

I found meanwhile that the patch is not complete. You have to add the same OS X options to the MITK external project as well.

Aug 2 2016, 10:09 AM · MITK (2014-03), Bugzilla
espak added a comment to T16776: Pass selected Mac OS X SDK to subprojects.

The ep_common_args is passed to all the dependent projects that are built as an external project of MITK. That is right.

Aug 2 2016, 10:09 AM · MITK (2014-03), Bugzilla
espak added a comment to T16698: Inconsistent state of mitk::PointSet, points cannot be removed.

17885 might be the same, but 17886 is different. It is not a bug but a missing feature, which was provided by the old position event but not by the new one.

Aug 2 2016, 10:09 AM · Bugzilla, MITK
espak added a comment to T16698: Inconsistent state of mitk::PointSet, points cannot be removed.

I'm preparing for our next MITK upgrade and try to revert the patches that we have been fixed in the upstream.

Aug 2 2016, 10:09 AM · Bugzilla, MITK
espak added a comment to T16698: Inconsistent state of mitk::PointSet, points cannot be removed.

Hi Tobias,
thanks for dealing with this issue.
As I see, you just committed a fix for this issue which seems to be almost identical to mine. Would you mind cherry picking my fix instead, so that the authorship is kept? I know that's a very trivial change.
I am happy to update the pull request to add the Signed-off-by clause.
Thanks.

Aug 2 2016, 10:09 AM · Bugzilla, MITK
espak added a comment to T16698: Inconsistent state of mitk::PointSet, points cannot be removed.

Not at all, thanks for the status update.

Aug 2 2016, 10:09 AM · Bugzilla, MITK
espak added a comment to T16698: Inconsistent state of mitk::PointSet, points cannot be removed.

Now I see that your commit was for the PointSetDataInteractor, while mine was for PointSetInteractor. Then just keep your commit, and also cherry-pick mine. I added the signed-off-by clause to it.

Aug 2 2016, 10:09 AM · Bugzilla, MITK
espak added a comment to T16698: Inconsistent state of mitk::PointSet, points cannot be removed.

The second issue (588ecb3d) is invalid, it has been fixed in the master meanwhile.

Aug 2 2016, 10:09 AM · Bugzilla, MITK
espak added a comment to T16698: Inconsistent state of mitk::PointSet, points cannot be removed.

Any update on this?

Aug 2 2016, 10:09 AM · Bugzilla, MITK
espak added a comment to T16698: Inconsistent state of mitk::PointSet, points cannot be removed.

The bug is potentially there in the 'else' branch as well, when there is no position and all the selected points have to be removed.

Aug 2 2016, 10:09 AM · Bugzilla, MITK
espak added a comment to T16698: Inconsistent state of mitk::PointSet, points cannot be removed.

I sent the pull request for the first bug.

Aug 2 2016, 10:09 AM · Bugzilla, MITK
espak added a comment to T16698: Inconsistent state of mitk::PointSet, points cannot be removed.

Have you got the core change request affirmation?

Aug 2 2016, 10:09 AM · Bugzilla, MITK
espak added projects to T16698: Inconsistent state of mitk::PointSet, points cannot be removed: MITK, Bugzilla.
Aug 2 2016, 10:09 AM · Bugzilla, MITK
espak added projects to T16409: DisplayPositionEvent can have inconsistent state: MITK, Bugzilla.
Aug 2 2016, 10:08 AM · MITK (2014-03), Bugzilla
espak added a comment to T16409: DisplayPositionEvent can have inconsistent state.

Any update on this?

Aug 2 2016, 10:08 AM · MITK (2014-03), Bugzilla
espak added a comment to T16409: DisplayPositionEvent can have inconsistent state.

Pull request sent:
https://github.com/MITK/MITK/pull/39

Aug 2 2016, 10:08 AM · MITK (2014-03), Bugzilla
espak added a comment to T16409: DisplayPositionEvent can have inconsistent state.

I noticed the same error in mitk::KeyEvent. It would be worth checking the other event types, too.

Aug 2 2016, 10:08 AM · MITK (2014-03), Bugzilla