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Sep 10 2024

s434n closed T30513: Remove MiniApp suffix from MitkFuse3Dto4DImage as Invalid.
Sep 10 2024, 5:03 PM · MITK (v2024.12)
s434n triaged T30513: Remove MiniApp suffix from MitkFuse3Dto4DImage as Normal priority.
Sep 10 2024, 5:00 PM · MITK (v2024.12)
s434n added a comment to T30328: Failure when loading DICOM files with missing series instance UID.

Maybe some extension: it would be nice if a warning could be general for incomplete DICOM files. I recently had a different case where the modality was missing, and at the moment it is quite difficult to figure out what information is missing since there is just a crash with little information.
So if we add a warning here, maybe it could be in a way that works for any required DICOM tags that are missing.

Sep 10 2024, 10:55 AM · Moved to git.dkfz.de, MITK (v2024.12)

Sep 4 2024

s434n moved T30494: Standard Display F1 help - missing content from Backlog to Cycle on the MITK (v2024.12) board.
Sep 4 2024, 2:31 PM · Moved to git.dkfz.de, MITK (v2024.12)
s434n assigned T30492: Ask for saving on exit of MITK Workbench to kislinsk.

Discussion result: want to do, probably without detailed modified checks

Sep 4 2024, 11:21 AM · Moved to git.dkfz.de, MITK

Jul 10 2024

s434n removed a project from T29024: [Core] Crash-inducing racing condition in TimeGeometry: Request for Discussion.
Jul 10 2024, 11:46 AM · Moved to git.dkfz.de, MITK
s434n added a comment to T29024: [Core] Crash-inducing racing condition in TimeGeometry.

Discussion result: we'll keep the task open. When eMITK builds again for the current state, try to reproduce the crash by going through the Geldosimetry workflow.
If it can't be reproduced, close the task.
If it can be reproduced, depending on the way the error expresses itself, either fix or accept as is.

Jul 10 2024, 11:46 AM · Moved to git.dkfz.de, MITK

Jun 17 2024

s434n reopened T27904: Feature request: Colorbars to interpret data in MITK as "Open".
Jun 17 2024, 4:11 PM · Moved to git.dkfz.de, Request for Discussion, MITK

Jun 13 2024

s434n committed rMITK4787b9ff0b03: Update Segmentation Utilities Documentation (smaller files) (authored by s434n).
Update Segmentation Utilities Documentation (smaller files)
Jun 13 2024, 10:18 AM
s434n committed rMITK7a36c4b11aa4: update documentation (authored by s434n).
update documentation
Jun 13 2024, 10:18 AM
s434n committed rMITKb1253ec6b890: fix typo and wrong order in tooltips (authored by s434n).
fix typo and wrong order in tooltips
Jun 13 2024, 10:18 AM

Jun 12 2024

s434n added a revision to T30467: [Segmentation Utilities] Update F1 help: Unknown Object (Differential Revision).
Jun 12 2024, 5:07 PM · MITK (v2024.06)
s434n triaged T30467: [Segmentation Utilities] Update F1 help as Normal priority.
Jun 12 2024, 5:00 PM · MITK (v2024.06)

Jun 10 2024

s434n committed rMITK6225b7aa64d6: Merge remote-tracking branch 'luzpaz/typo/modules' into bugfix/T30459… (authored by s434n).
Merge remote-tracking branch 'luzpaz/typo/modules' into bugfix/T30459…
Jun 10 2024, 4:17 PM
s434n committed rMITKd812b1223791: update missed renamed variables & refix some typos (authored by s434n).
update missed renamed variables & refix some typos
Jun 10 2024, 4:17 PM
s434n added a comment to T30459: Merge typo pull requests from github.

Pushed new branch to rMITK MITK: bugfix/T30459-mergeGithubPullRequest276.

Jun 10 2024, 1:56 PM · MITK

Jun 5 2024

s434n committed rMITKa2bde513b453: Merge remote-tracking branch 'luzpaz/typos/documentation' into… (authored by s434n).
Merge remote-tracking branch 'luzpaz/typos/documentation' into…
Jun 5 2024, 10:07 PM
s434n committed rMITKe62708691881: reverse wrong spelling of columnNumber (authored by s434n).
reverse wrong spelling of columnNumber
Jun 5 2024, 10:07 PM
s434n added a comment to T30459: Merge typo pull requests from github.

Pushed new branch to rMITK MITK: bugfix/T30459-mergeGithubPullRequest275.

Jun 5 2024, 3:17 PM · MITK
s434n triaged T30459: Merge typo pull requests from github as Normal priority.
Jun 5 2024, 3:16 PM · MITK

May 28 2024

s434n closed T30449: [MxN] Setting data-based layout does not update visibility as Resolved by committing rMITK27cb841051cb: Ensure visibility in data based layout.
May 28 2024, 9:28 AM · Checklist, MITK
s434n committed rMITK27cb841051cb: Ensure visibility in data based layout (authored by s434n).
Ensure visibility in data based layout
May 28 2024, 9:28 AM
s434n committed rMITKd1260c01aa28: ensure visibility in data based layout (authored by s434n).
ensure visibility in data based layout
May 28 2024, 9:28 AM
s434n committed rMITKbd96f7e1b32c: Disable threshold tools updating after each entered digit (authored by s434n).
Disable threshold tools updating after each entered digit
May 28 2024, 9:27 AM
s434n committed rMITKed6544ece9de: disable keyboardTracking for spinboxes inside ctk slider widgets (authored by s434n).
disable keyboardTracking for spinboxes inside ctk slider widgets
May 28 2024, 9:27 AM

May 27 2024

s434n committed rMITKa54850548977: Fix warning when opening volume visualization (authored by s434n).
Fix warning when opening volume visualization
May 27 2024, 2:45 PM
s434n committed rMITK1d09e3c5870e: remove superfluous rangeslider min max members (authored by s434n).
remove superfluous rangeslider min max members
May 27 2024, 2:45 PM

May 24 2024

s434n claimed T30423: [SEG] Segment Anything misleading GPU message for first time users.
May 24 2024, 2:04 PM · Checklist, MITK (v2024.06)
s434n added a revision to T30423: [SEG] Segment Anything misleading GPU message for first time users: Unknown Object (Differential Revision).
May 24 2024, 2:03 PM · Checklist, MITK (v2024.06)
s434n added a comment to T30435: Rename "Time" to "Timestep" in Image Navigator?.

Could it make sense to add an additional field to the Image Navigator, similar to the "Loc. (mm)" but instead for time? Then both the timestep and the time in (ms) could be shown at the same time.

May 24 2024, 1:26 PM · Moved to git.dkfz.de, MITK (v2024.12), Checklist

May 23 2024

s434n added a revision to T30449: [MxN] Setting data-based layout does not update visibility: Unknown Object (Differential Revision).
May 23 2024, 3:57 PM · Checklist, MITK

May 22 2024

s434n triaged T30451: [Segmentation] Tool icon persists on cursor as Low priority.
May 22 2024, 11:08 AM · Moved to git.dkfz.de, Request for Discussion, Checklist, MITK
s434n triaged T30450: [MxN] Visibility of label-nodes is confusing in unlocked windows as Normal priority.
May 22 2024, 10:57 AM · Moved to git.dkfz.de, Checklist, MITK
s434n triaged T30449: [MxN] Setting data-based layout does not update visibility as Normal priority.
May 22 2024, 10:41 AM · Checklist, MITK

Apr 26 2024

s434n triaged T30402: [Segmentation] Dynamic segmentations shown across multiple timesteps as Unbreak Now! priority.
Apr 26 2024, 4:23 PM · MITK

Apr 22 2024

s434n committed rMITK2ae0f5f096f5: Automated MxN layout from data (authored by s434n).
Automated MxN layout from data
Apr 22 2024, 10:24 AM
s434n committed rMITKe052a0400857: fix initialization of ui pointer (authored by s434n).
fix initialization of ui pointer
Apr 22 2024, 10:24 AM
s434n committed rMITK99fa3fee61e0: fix remarks (authored by s434n).
fix remarks
Apr 22 2024, 10:24 AM
s434n committed rMITK50c273259bff: fix constructor of automated layout widget (authored by s434n).
fix constructor of automated layout widget
Apr 22 2024, 10:24 AM
s434n committed rMITKfd5603a2ba17: reinit render windows when creating automated layout from data (authored by s434n).
reinit render windows when creating automated layout from data
Apr 22 2024, 10:24 AM
s434n committed rMITK2265d1787774: add node predicate to data based layout selector (authored by s434n).
add node predicate to data based layout selector
Apr 22 2024, 10:24 AM
s434n committed rMITK47041cfc3a6a: make MxN layout selection widget prettier (authored by s434n).
make MxN layout selection widget prettier
Apr 22 2024, 10:24 AM
s434n committed rMITK37bd8450c54b: fix resizing of table view items (authored by s434n).
fix resizing of table view items
Apr 22 2024, 10:24 AM
s434n committed rMITK00e03cb3fbf2: implement automated data based layout creation (authored by s434n).
implement automated data based layout creation
Apr 22 2024, 10:24 AM
s434n committed rMITKb719c9f0bdf6: make columns in MxN data selection only as wide as needed (authored by s434n).
make columns in MxN data selection only as wide as needed
Apr 22 2024, 10:24 AM
s434n committed rMITK29fb9786ca2a: add automated layout widget UI (authored by s434n).
add automated layout widget UI
Apr 22 2024, 10:24 AM

Apr 15 2024

s434n triaged T30394: [MxN] Disconnect MxN windows from StdMultiWidget as Normal priority.
Apr 15 2024, 12:38 PM · Moved to git.dkfz.de, MITK

Apr 10 2024

s434n added a comment to T30250: [MxN] Windows created by preset have no in-window menus.

In a certain sense, the bug would be fixed by making sure the menus are present when the layout changes.
However, it might make sense to rethink the usefulness of these menus in the MxN context, since many features are not usable anyway (e.g. rotation).
The layout management of the rightmost menu can still be used, but might need heavy extension for useful usage. We might redesign it entirely, to make it more general for Std- and MxN-view, or remove it from MxN on purpose.

Apr 10 2024, 10:50 AM · Moved to git.dkfz.de, MITK (v2024.12)

Apr 5 2024

s434n triaged T30389: [MxN] Expand options of (semi-)automated layout creation as Normal priority.
Apr 5 2024, 3:28 PM · Moved to git.dkfz.de, MITK

Apr 4 2024

s434n removed a project from T29526: [Segmentation] Workbench crashes when closing render window part with active tool: Missing Info.

Yes, this still happens as described above.

Apr 4 2024, 2:07 PM · MITK (v2024.06)

Mar 20 2024

s434n placed T29333: [mxn multi widget] Measurements / planar figure not working up for grabs.
Mar 20 2024, 1:50 PM · Moved to git.dkfz.de, MITK (v2024.12)
s434n triaged T30379: [Volume Visualization] Create generic initialization as Low priority.
Mar 20 2024, 1:48 PM · Moved to git.dkfz.de, MITK (v2024.12)
s434n removed a project from T30241: [MxN] Rethink select-all logic in MxN data selection: Request for Discussion.
Mar 20 2024, 11:37 AM · Moved to git.dkfz.de, MITK (v2024.12)
s434n added a parent task for T30241: [MxN] Rethink select-all logic in MxN data selection: T30360: [MxN] Add group synchronization.
Mar 20 2024, 11:36 AM · Moved to git.dkfz.de, MITK (v2024.12)
s434n added a subtask for T30360: [MxN] Add group synchronization: T30241: [MxN] Rethink select-all logic in MxN data selection.
Mar 20 2024, 11:36 AM · Moved to git.dkfz.de, MITK

Mar 18 2024

s434n closed T30364: Unable to fine tune 3D Volume Visualization for floating point images as Resolved.
Mar 18 2024, 5:50 PM · MITK
s434n committed rMITK7272c57d32f2: Update volume visualization to handle floating point data (authored by s434n).
Update volume visualization to handle floating point data
Mar 18 2024, 5:50 PM
s434n committed rMITK120e6cdbbd18: fix import of ctkDoubleRangeSlider in ui file (authored by s434n).
fix import of ctkDoubleRangeSlider in ui file
Mar 18 2024, 5:50 PM
s434n committed rMITK009c276588fe: make type of nBins unsigned for correct comparison (authored by s434n).
make type of nBins unsigned for correct comparison
Mar 18 2024, 5:50 PM
s434n committed rMITKf5dddbdec09b: update volume visualization to handle floating point data (authored by s434n).
update volume visualization to handle floating point data
Mar 18 2024, 5:50 PM

Mar 15 2024

s434n claimed T29333: [mxn multi widget] Measurements / planar figure not working.
Mar 15 2024, 1:49 PM · Moved to git.dkfz.de, MITK (v2024.12)

Mar 14 2024

s434n triaged T30370: [Statistics] Order labels the same way as in the Segmentation View as Normal priority.
Mar 14 2024, 2:21 PM · Moved to git.dkfz.de, MITK (v2024.12)
s434n triaged T30369: [Statistics] Position of minimum and maximum are one off for masks of rotated images as Normal priority.
Mar 14 2024, 2:13 PM · Moved to git.dkfz.de, MITK (v2024.12)

Mar 8 2024

s434n triaged T30364: Unable to fine tune 3D Volume Visualization for floating point images as Normal priority.
Mar 8 2024, 3:31 PM · MITK
s434n claimed T30364: Unable to fine tune 3D Volume Visualization for floating point images.
Mar 8 2024, 3:31 PM · MITK

Mar 6 2024

s434n added a comment to T29273: Decouple TimeNavigation from SliceNavigationController.

Deleted branch from rMITK MITK: feature/T29273-Decouple-TimeNavigationController-from-SliceNavigationController.

Mar 6 2024, 2:46 PM · MITK
s434n closed T29273: Decouple TimeNavigation from SliceNavigationController, a subtask of T29264: Overhaul of the SliceNavigationController and the BaseRenderer, as Resolved.
Mar 6 2024, 2:43 PM · Moved to git.dkfz.de, MITK
s434n closed T29273: Decouple TimeNavigation from SliceNavigationController as Resolved.
Mar 6 2024, 2:43 PM · MITK
s434n removed a project from T30337: Allow custom product name and further customizations: Request for Discussion.
Mar 6 2024, 12:27 PM · MITK
s434n triaged T30360: [MxN] Add group synchronization as Normal priority.
Mar 6 2024, 12:25 PM · Moved to git.dkfz.de, MITK
s434n removed a project from T30354: [MedSAM] Update SAM python daemon script for MedSAM: Request for Discussion.
Mar 6 2024, 12:18 PM · MITK (v2024.06)
s434n removed a project from T30314: MedSAM in MITK: Request for Discussion.

Discussion result:
Simplify bounding box interaction / Add simpler version and make it available outside of the Image Cropper

Mar 6 2024, 12:17 PM · Moved to git.dkfz.de, MITK (v2024.12)
s434n removed a project from T29168: [Multilabel Segmentation] Definition and usage of masking and maskstamping: Request for Discussion.

The action makes sense, for the stamping widget we'll have to check if it is used somewhere, and in doubt remove it.

Mar 6 2024, 11:40 AM · Moved to git.dkfz.de, MITK (v2024.12)
s434n assigned T30346: [SEG] Are PointCloudScoringFilter and FeatureBasedEdgeDetectionFilter still in use? (also other filters in segmentation/algorithms) to floca.

Discussion result: remove

Mar 6 2024, 11:34 AM · MITK
s434n triaged T30348: [Statistics] QmitkImagesStatisticsTreeModel currently does not update when names of inputs changes as Normal priority.

Discussion result: for now, we can live with this being a known issue

Mar 6 2024, 11:30 AM · Moved to git.dkfz.de, MITK
s434n moved T29641: [Movie Maker] Allow rotation around different axes from Cycle to Backlog on the MITK (v2024.06) board.
Mar 6 2024, 9:23 AM · Moved to git.dkfz.de, MITK (v2024.12)

Feb 21 2024

s434n added a comment to T30328: Failure when loading DICOM files with missing series instance UID.

I am also in favor of option 3.

Feb 21 2024, 11:04 AM · Moved to git.dkfz.de, MITK (v2024.12)

Feb 7 2024

s434n assigned T29390: How to ease the handling of external generated segmentations to kislinsk.
Feb 7 2024, 11:52 AM · MITK (v2024.06)
s434n removed a project from T29390: How to ease the handling of external generated segmentations: Request for Discussion.

Conclusion: still needs subtasks

  • can the binary tag be removed?
  • convert binary images easier into segmentations
  • offer python utility package as a way to convert -> T29389
Feb 7 2024, 11:52 AM · MITK (v2024.06)
s434n removed a project from T29389: Python utility module: Request for Discussion.

Conclusion: makes sense to do, will be tackled implicitly in the future.

Feb 7 2024, 11:47 AM · Moved to git.dkfz.de, MITK (v2024.12)
s434n removed a project from T30312: Remove unused, legacy, or obsolete modules and plugins: Request for Discussion.

Discussion: the listed parts can be removed + semantic relations can also be removed (in its current implementation state, because it would need to be reimplemented with property relation rules).

Feb 7 2024, 11:42 AM · MITK (v2024.06)
s434n closed T30307: Join the dcmqi planning at NA-MIC/Project week. as Resolved.

Has been clarified

Feb 7 2024, 11:25 AM · Request for Discussion, MITK
s434n added a comment to T30310: Add new views, e.g. for Seg Task List or Perfusion.

Conclusion: In general it makes sense, but we would want to get rid of the "locked state" of the perspective. Needs further research if the locked state can be removed easily or be made more clearly visible, e.g. by a UI element.

Feb 7 2024, 11:22 AM · Moved to git.dkfz.de, Missing Info, MITK
s434n edited projects for T30310: Add new views, e.g. for Seg Task List or Perfusion, added: Missing Info; removed Request for Discussion.
Feb 7 2024, 11:19 AM · Moved to git.dkfz.de, Missing Info, MITK
s434n merged T30318: [Segmentation] Saving label preset cuts off last label into T30309: [SEG] Last label of label preset is sometimes not stored.
Feb 7 2024, 11:03 AM · MITK (v2024.06)
s434n merged task T30318: [Segmentation] Saving label preset cuts off last label into T30309: [SEG] Last label of label preset is sometimes not stored.
Feb 7 2024, 11:03 AM · MITK (v2024.06)

Feb 2 2024

s434n triaged T30318: [Segmentation] Saving label preset cuts off last label as Low priority.
Feb 2 2024, 5:45 PM · MITK (v2024.06)

Jan 25 2024

s434n committed rMP80e60e47a72f: implement NTG metric calculation (authored by s434n).
implement NTG metric calculation
Jan 25 2024, 2:07 PM

Jan 10 2024

s434n committed rMITK02c3ee6797f5: Correct typo in manual registration (authored by s434n).
Correct typo in manual registration
Jan 10 2024, 2:21 PM
s434n committed rMITK7d8e6e2c6d38: correctly write "manual" (authored by s434n).
correctly write "manual"
Jan 10 2024, 2:21 PM

Dec 8 2023

s434n triaged T30296: [Perfusion] Concentration Curve Converter view does not hide options when deselecting 3D/4D as Low priority.
Dec 8 2023, 1:32 PM · Moved to git.dkfz.de, MITK (v2024.12)

Nov 30 2023

s434n edited the content of MITK v2023.12.
Nov 30 2023, 1:50 PM

Nov 27 2023

s434n committed rMITK57be9c209320: [Statistics] Filter planar figures in data selection by control point position (authored by s434n).
[Statistics] Filter planar figures in data selection by control point position
Nov 27 2023, 12:13 PM
s434n closed T30258: [Statistics] Lines across different geometries can cause crash when analyzed with image as Resolved by committing rMITK57be9c209320: [Statistics] Filter planar figures in data selection by control point position.
Nov 27 2023, 12:13 PM · Checklist, MITK (v2023.12)
s434n committed rMITK0b3d5e72caf9: allow selection of closed planar figures (authored by s434n).
allow selection of closed planar figures
Nov 27 2023, 12:13 PM
s434n committed rMITK1a88d6306e34: add comment to mark temporary code (authored by s434n).
add comment to mark temporary code
Nov 27 2023, 12:13 PM
s434n committed rMITK0e6de7308974: use auto and make added method a free function with earlier returns (authored by s434n).
use auto and make added method a free function with earlier returns
Nov 27 2023, 12:13 PM
s434n committed rMITKf90375061024: fix sign of loop variable (authored by s434n).
fix sign of loop variable
Nov 27 2023, 12:13 PM
s434n committed rMITK6e9ca9ab0d34: check if control points are within image geometry (authored by s434n).
check if control points are within image geometry
Nov 27 2023, 12:13 PM
s434n triaged T30279: [Statistics] Fix cutoff of non-closed planar figures as Normal priority.
Nov 27 2023, 12:10 PM · Moved to git.dkfz.de, MITK (v2024.12)