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Nov 6 2017

reicht added a comment to T23433: Anonymise sensitive burnt-in information in pixeldata.

Enabled CTP DICOM-PIXEL-ANONYMISER Processor and updated script according to CT Scanners parameters. All further DICOM pixeldata will be anonymised accordingly

Nov 6 2017, 4:53 PM · CSI-HD
reicht moved T23433: Anonymise sensitive burnt-in information in pixeldata from ANA ToDo to Doing on the CSI-HD board.
Nov 6 2017, 2:49 PM · CSI-HD
reicht moved T23433: Anonymise sensitive burnt-in information in pixeldata from DKFZ ToDo to ANA ToDo on the CSI-HD board.
Nov 6 2017, 2:08 PM · CSI-HD

Sep 26 2017

reicht moved T23433: Anonymise sensitive burnt-in information in pixeldata from RM ToDo to DKFZ ToDo on the CSI-HD board.
Sep 26 2017, 1:01 PM · CSI-HD
reicht created T23433: Anonymise sensitive burnt-in information in pixeldata.
Sep 26 2017, 1:01 PM · CSI-HD

Sep 13 2017

reicht moved T23244: Xnat plugin: easy to use nrrd upload after DICOM import from Doing to DKFZ ToDo on the CSI-HD board.
Sep 13 2017, 2:58 PM · CSI-HD, MITK

Sep 2 2017

reicht added a comment to T23244: Xnat plugin: easy to use nrrd upload after DICOM import.

Also on macOS same issue occurs using a localizer sequence. This is shown in the log:

Sep 2 2017, 12:00 AM · CSI-HD, MITK

Sep 1 2017

reicht added a comment to T23244: Xnat plugin: easy to use nrrd upload after DICOM import.
Tested this commit rMITK2d98a91f27b0 on Win10
Sep 1 2017, 1:57 PM · CSI-HD, MITK

Aug 30 2017

reicht added a comment to T23244: Xnat plugin: easy to use nrrd upload after DICOM import.

Pushed new branch T23244-XNAT-nrrd-convenient-upload-feature.

Aug 30 2017, 11:52 PM · CSI-HD, MITK

Aug 24 2017

reicht added a parent task for T23240: Xnat plugin: refresh treebrowser when file has been uploaded: T23301: XNAT improvements.
Aug 24 2017, 6:34 PM · Auto-closed, CSI-HD, MITK
reicht added a parent task for T23241: Xnat plugin: refresh treebrowser when new folder is created: T23301: XNAT improvements.
Aug 24 2017, 6:34 PM · Auto-closed, CSI-HD, MITK
reicht added a parent task for T23243: Xnat plugin: Fix upload status message: T23301: XNAT improvements.
Aug 24 2017, 6:34 PM · Auto-closed, CSI-HD, MITK
reicht added a parent task for T23242: Xnat plugin: Drag and Drop feature between Xnat plugin and Datamanager: T23301: XNAT improvements.
Aug 24 2017, 6:34 PM · Auto-closed, CSI-HD, MITK
reicht added a parent task for T23244: Xnat plugin: easy to use nrrd upload after DICOM import: T23301: XNAT improvements.
Aug 24 2017, 6:34 PM · CSI-HD, MITK
reicht added a parent task for T23249: Ensure openSSL availability for MITK installers using XNAT plugin or other REST services: T23301: XNAT improvements.
Aug 24 2017, 6:34 PM · Restricted Project, CSI-HD, MITK
reicht added a comment to T23243: Xnat plugin: Fix upload status message.

seems like this only occurs when using the upload context menu in Datamanager. When using upload button I could not recall this issue.

Aug 24 2017, 6:16 PM · Auto-closed, CSI-HD, MITK
reicht added a comment to T23244: Xnat plugin: easy to use nrrd upload after DICOM import.

On windows steps 2 and 3 are still needed because an error is thrown otherwise. Please note, that this was tested on DIPP2017029000. My tests on OSX were performed on a newer MITK master branch.

Aug 24 2017, 6:14 PM · CSI-HD, MITK
reicht moved T23244: Xnat plugin: easy to use nrrd upload after DICOM import from Done to Doing on the CSI-HD board.
Aug 24 2017, 6:13 PM · CSI-HD, MITK
reicht moved T23058: Structure latest notes from last meeting from Doing to Done on the CSI-HD board.
Aug 24 2017, 6:12 PM · CSI-HD

Aug 19 2017

reicht moved T23244: Xnat plugin: easy to use nrrd upload after DICOM import from Doing to Done on the CSI-HD board.
Aug 19 2017, 9:04 PM · CSI-HD, MITK
reicht moved T23058: Structure latest notes from last meeting from Done to Doing on the CSI-HD board.
Aug 19 2017, 9:04 PM · CSI-HD
reicht moved T23058: Structure latest notes from last meeting from Doing to Done on the CSI-HD board.
Aug 19 2017, 9:03 PM · CSI-HD

Aug 15 2017

reicht moved T23109: Implement Datapipeline to access forensic-rad. images via XNAT (external partners) from Doing to Done on the CSI-HD board.

Tested proof of concept of this task while working on this task T23244: Xnat plugin: easy to use nrrd upload after DICOM import.

Aug 15 2017, 11:52 PM · CSI-HD
reicht claimed T23244: Xnat plugin: easy to use nrrd upload after DICOM import.
Aug 15 2017, 11:47 PM · CSI-HD, MITK
reicht moved T23244: Xnat plugin: easy to use nrrd upload after DICOM import from DKFZ ToDo to Doing on the CSI-HD board.
Aug 15 2017, 11:47 PM · CSI-HD, MITK
reicht added a comment to T23244: Xnat plugin: easy to use nrrd upload after DICOM import.

Step 2 and 3 can already be skipped. Tested on OSX using latest MITK master build. Need to verify on Windows and with a collaborating radiologist.

Aug 15 2017, 11:34 PM · CSI-HD, MITK

Aug 14 2017

reicht moved T23249: Ensure openSSL availability for MITK installers using XNAT plugin or other REST services from RM ToDo to DKFZ ToDo on the CSI-HD board.
Aug 14 2017, 6:17 PM · Restricted Project, CSI-HD, MITK
reicht created T23249: Ensure openSSL availability for MITK installers using XNAT plugin or other REST services.
Aug 14 2017, 6:16 PM · Restricted Project, CSI-HD, MITK

Aug 11 2017

reicht moved T23243: Xnat plugin: Fix upload status message from RM ToDo to DKFZ ToDo on the CSI-HD board.
Aug 11 2017, 6:08 PM · Auto-closed, CSI-HD, MITK
reicht moved T23244: Xnat plugin: easy to use nrrd upload after DICOM import from RM ToDo to DKFZ ToDo on the CSI-HD board.
Aug 11 2017, 6:08 PM · CSI-HD, MITK
reicht created T23244: Xnat plugin: easy to use nrrd upload after DICOM import.
Aug 11 2017, 6:08 PM · CSI-HD, MITK
reicht created T23243: Xnat plugin: Fix upload status message.
Aug 11 2017, 6:00 PM · Auto-closed, CSI-HD, MITK
reicht moved T23240: Xnat plugin: refresh treebrowser when file has been uploaded from RM ToDo to DKFZ ToDo on the CSI-HD board.
Aug 11 2017, 5:58 PM · Auto-closed, CSI-HD, MITK
reicht moved T23241: Xnat plugin: refresh treebrowser when new folder is created from RM ToDo to DKFZ ToDo on the CSI-HD board.
Aug 11 2017, 5:58 PM · Auto-closed, CSI-HD, MITK
reicht moved T23242: Xnat plugin: Drag and Drop feature between Xnat plugin and Datamanager from RM ToDo to DKFZ ToDo on the CSI-HD board.
Aug 11 2017, 5:58 PM · Auto-closed, CSI-HD, MITK
reicht added a project to T23241: Xnat plugin: refresh treebrowser when new folder is created: CSI-HD.
Aug 11 2017, 5:58 PM · Auto-closed, CSI-HD, MITK
reicht created T23242: Xnat plugin: Drag and Drop feature between Xnat plugin and Datamanager.
Aug 11 2017, 5:57 PM · Auto-closed, CSI-HD, MITK
reicht created T23240: Xnat plugin: refresh treebrowser when file has been uploaded.
Aug 11 2017, 5:52 PM · Auto-closed, CSI-HD, MITK

Aug 9 2017

reicht updated the task description for T23207: Digital data formats for long term storage.
Aug 9 2017, 5:23 PM · CSI-HD
reicht updated the task description for T23207: Digital data formats for long term storage.
Aug 9 2017, 5:22 PM · CSI-HD
reicht moved T23207: Digital data formats for long term storage from RM ToDo to DKFZ ToDo on the CSI-HD board.
Aug 9 2017, 5:21 PM · CSI-HD
reicht renamed T23207: Digital data formats for long term storage from Digital data format for long term storage to Digital data formats for long term storage.
Aug 9 2017, 5:03 PM · CSI-HD
reicht created T23207: Digital data formats for long term storage.
Aug 9 2017, 5:02 PM · CSI-HD

Aug 3 2017

reicht updated the task description for T23140: Test XNAT-archive access through Proxy.
Aug 3 2017, 5:58 PM · CSI-HD
reicht added a comment to T23140: Test XNAT-archive access through Proxy.

Access and Login to XNAT via Webbrowser works
Viewing images on and downloading images from XNAT-Webportal did not work and caused a Java error (Exception that some JavaClass is missing although java is properly installed). Therefore the Webportal is of low interest.

  • Installation of DIPP will work only on new PCs with 64 Bit Operating system (ev. use Notebook)
  • Test MITK-XNAT plugin on site (contact Mr. Falk Gauss, IT Admin at Forensics Dept.)
Aug 3 2017, 5:45 PM · CSI-HD
reicht added a member for CSI-HD: yenk.
Aug 3 2017, 2:48 PM
reicht added a comment to T23140: Test XNAT-archive access through Proxy.

resolving the address:

Aug 3 2017, 11:23 AM · CSI-HD
nolden updated subscribers of T23140: Test XNAT-archive access through Proxy.

@reicht do you need support? Additional testcases? cc'ing @metzger @thomass

Aug 3 2017, 9:35 AM · CSI-HD

Aug 2 2017

reicht updated subscribers of T23140: Test XNAT-archive access through Proxy.

@nolden, tomorrow I will meet with Prof. Yen at forensics institute. If there is time left, XNAT-access via Webbrowser and MITK (DIPP with XNAT Plugin) testing can be performed.

Aug 2 2017, 7:14 PM · CSI-HD
reicht updated subscribers of T23109: Implement Datapipeline to access forensic-rad. images via XNAT (external partners).

A routine post-mortem CT scan successfully sent from Anatomy CT-scanner via CSI-HD datapipelines to XNAT (internet accessible XNAT) csi-hd project. Might be of interest for @thomass @nolden

Aug 2 2017, 7:09 PM · CSI-HD
reicht added a member for CSI-HD: thomass.
Aug 2 2017, 7:07 PM
reicht added a member for CSI-HD: nolden.
Aug 2 2017, 7:06 PM
reicht claimed T23109: Implement Datapipeline to access forensic-rad. images via XNAT (external partners).
Aug 2 2017, 6:33 PM · CSI-HD
reicht changed the visibility for T23140: Test XNAT-archive access through Proxy.
Aug 2 2017, 9:49 AM · CSI-HD
reicht renamed T23140: Test XNAT-archive access through Proxy from Test XNAT archive access through Proxy to Test XNAT-archive access through Proxy.
Aug 2 2017, 9:49 AM · CSI-HD
reicht created T23140: Test XNAT-archive access through Proxy.
Aug 2 2017, 9:48 AM · CSI-HD

Jul 19 2017

reicht moved T23058: Structure latest notes from last meeting from RM ToDo to Doing on the CSI-HD board.
Jul 19 2017, 5:27 PM · CSI-HD
reicht moved T23109: Implement Datapipeline to access forensic-rad. images via XNAT (external partners) from RM ToDo to DKFZ ToDo on the CSI-HD board.
Jul 19 2017, 5:26 PM · CSI-HD
reicht changed the visibility for T23109: Implement Datapipeline to access forensic-rad. images via XNAT (external partners).
Jul 19 2017, 5:25 PM · CSI-HD
reicht added a comment to T23109: Implement Datapipeline to access forensic-rad. images via XNAT (external partners).

Talked to @nolden if an XNAT instance can be provided which is accessible from the internet.

Jul 19 2017, 5:23 PM · CSI-HD
reicht created T23109: Implement Datapipeline to access forensic-rad. images via XNAT (external partners).
Jul 19 2017, 5:20 PM · CSI-HD
reicht moved T23058: Structure latest notes from last meeting from Doing to RM ToDo on the CSI-HD board.
Jul 19 2017, 3:20 PM · CSI-HD
reicht updated the image for CSI-HD from F803072: profile to F803078: profile.
Jul 19 2017, 3:15 PM
reicht updated the image for CSI-HD from F795287: profile to F803072: profile.
Jul 19 2017, 3:09 PM

Jul 11 2017

reicht claimed T23058: Structure latest notes from last meeting.
Jul 11 2017, 3:59 PM · CSI-HD
reicht moved T23058: Structure latest notes from last meeting from RM ToDo to Doing on the CSI-HD board.
Jul 11 2017, 3:59 PM · CSI-HD
reicht created T23068: Write PhD Thesis.
Jul 11 2017, 3:58 PM · CSI-HD
reicht updated the task description for T23058: Structure latest notes from last meeting.
Jul 11 2017, 3:55 PM · CSI-HD
reicht moved T23058: Structure latest notes from last meeting from Sonstige ToDo to RM ToDo on the CSI-HD board.
Jul 11 2017, 3:52 PM · CSI-HD
reicht changed the visibility for T23058: Structure latest notes from last meeting.
Jul 11 2017, 3:51 PM · CSI-HD

Jul 10 2017

reicht moved T23058: Structure latest notes from last meeting from RM ToDo to Sonstige ToDo on the CSI-HD board.
Jul 10 2017, 11:52 PM · CSI-HD
reicht raised the priority of T23058: Structure latest notes from last meeting from Normal to High.
Jul 10 2017, 1:18 PM · CSI-HD
reicht created T23058: Structure latest notes from last meeting.
Jul 10 2017, 11:42 AM · CSI-HD

Jul 7 2017

reicht moved T23038: Define Workboard Layout from Doing to Done on the CSI-HD board.
Jul 7 2017, 11:55 PM · CSI-HD
reicht added a member for CSI-HD: schoofs.
Jul 7 2017, 11:53 PM
reicht added a member for CSI-HD: floca.
Jul 7 2017, 11:53 PM
reicht edited Description on CSI-HD.
Jul 7 2017, 11:48 PM
reicht moved T23056: Create meme for PhD project from RM ToDo to Done on the CSI-HD board.

Creativity simply hit me :-D

meme 1

Screen Shot 2017-07-07 at 23.19.22.png (1×1 px, 1 MB)

Jul 7 2017, 11:24 PM · CSI-HD
reicht created T23056: Create meme for PhD project.
Jul 7 2017, 11:16 PM · CSI-HD
reicht edited Description on CSI-HD.
Jul 7 2017, 11:10 PM
reicht edited Description on CSI-HD.
Jul 7 2017, 10:35 PM
reicht edited Description on CSI-HD.
Jul 7 2017, 10:32 PM
reicht updated the image for CSI-HD from F795282: profile to F795287: profile.
Jul 7 2017, 10:29 PM
reicht edited Description on CSI-HD.
Jul 7 2017, 10:28 PM
reicht updated the image for CSI-HD from F793628: profile to F795282: profile.
Jul 7 2017, 10:27 PM
reicht changed the visibility for T23038: Define Workboard Layout.
Jul 7 2017, 5:03 PM · CSI-HD
reicht added a comment to T23038: Define Workboard Layout.

Apart from the classic workboard design which includes "swimlines" such as:

  1. Open Tasks
  2. Discussion
  3. Doing
  4. Testing
  5. Resolved
Jul 7 2017, 5:02 PM · CSI-HD
reicht moved T23038: Define Workboard Layout from Sonstige ToDo to Doing on the CSI-HD board.
Jul 7 2017, 4:50 PM · CSI-HD
reicht moved T23038: Define Workboard Layout from ANA ToDo to Sonstige ToDo on the CSI-HD board.
Jul 7 2017, 4:50 PM · CSI-HD
reicht moved T23038: Define Workboard Layout from RM ToDo to ANA ToDo on the CSI-HD board.
Jul 7 2017, 4:48 PM · CSI-HD

Jul 5 2017

reicht edited Description on CSI-HD.
Jul 5 2017, 8:55 PM
reicht created T23038: Define Workboard Layout.
Jul 5 2017, 8:02 PM · CSI-HD
kislinsk added a hashtag to CSI-HD: #csihd.
Jul 5 2017, 7:45 PM
kislinsk set the color for CSI-HD to Grey.
Jul 5 2017, 12:40 PM
kislinsk updated the image for CSI-HD from Unknown Object (File) to F793628: profile.
Jul 5 2017, 12:40 PM
kislinsk updated the image for CSI-HD from F793589: profile to Unknown Object (File).
Jul 5 2017, 12:36 PM
kislinsk updated the image for CSI-HD from F793588: fa-tags-green.png to F793589: profile.
Jul 5 2017, 11:00 AM
kislinsk created CSI-HD.
Jul 5 2017, 11:00 AM