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kahl (Kim-Celine Kahl)
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User Since
Oct 13 2017, 9:09 AM (209 w, 5 d)

Recent Activity

Today

kahl added a comment to T28464: [Segmentation] New Add/Remove tool.

Pushed new branch to rMITK MITK: feature/T28464-new-add-tool.

Wed, Oct 20, 9:36 AM · Cleared, MITK (v2021.10)

Mon, Oct 18

kahl committed rMITKbc4a6076f49a: avoid vertex to be added outside contour (authored by kahl).
avoid vertex to be added outside contour
Mon, Oct 18, 9:48 AM
kahl committed rMITK699f9b84b3d3: refactor get vertex and split contour (authored by kahl).
refactor get vertex and split contour
Mon, Oct 18, 9:48 AM
kahl committed rMITK010f7051103f: implement edge cases for moving points (authored by kahl).
implement edge cases for moving points
Mon, Oct 18, 9:48 AM
kahl committed rMITK2809ba702298: removed unused variables (authored by kahl).
removed unused variables
Mon, Oct 18, 9:48 AM
kahl committed rMITKc2a28ece5d32: deleted old implementation of SplitContourFromSelectedVertex and added comments (authored by kahl).
deleted old implementation of SplitContourFromSelectedVertex and added comments
Mon, Oct 18, 9:48 AM
kahl committed rMITK41981c2e30b1: Merge branch 'develop' into feature/T28607-live-wire-improvements (authored by kahl).
Merge branch 'develop' into feature/T28607-live-wire-improvements
Mon, Oct 18, 9:48 AM
kahl committed rMITK4bb9a540550f: fix initialization and return statement in itkShortestPathImageFilter (authored by kahl).
fix initialization and return statement in itkShortestPathImageFilter
Mon, Oct 18, 9:48 AM
kahl committed rMITK85e2645d4d9b: refactorings from review (authored by kahl).
refactorings from review
Mon, Oct 18, 9:48 AM
kahl moved T28748: [Segmentation] New Add tool: Behavior for modifying painted regions from Backlog to MITK Meeting on the Request for Discussion board.
Mon, Oct 18, 9:28 AM · Request for Discussion, MITK
kahl triaged T28748: [Segmentation] New Add tool: Behavior for modifying painted regions as Normal priority.
Mon, Oct 18, 9:28 AM · Request for Discussion, MITK

Thu, Sep 30

kahl closed T28521: multilabel segmentation add switch to disable contour as Resolved.
Thu, Sep 30, 11:21 AM · MITK (v2021.10)
kahl added a comment to T28521: multilabel segmentation add switch to disable contour.

This function is also available in the preferences (Ctrl+P). There, just select "Draw as transparent overlay" (see image below).

image.png (103×619 px, 5 KB)

Thu, Sep 30, 11:21 AM · MITK (v2021.10)

Apr 28 2021

kahl added a comment to T28437: 3D region growing may have issues when the seed point is on a pixel with value 0.

Deleted branch from rMITK MITK: bugfix/T28437-RegionGrowing3DSeedPoint0.

Apr 28 2021, 12:13 PM · MITK (v2021.10)
kahl committed rMITKf0703a7a08e9: modify region growing 3D to work with low seed point value (authored by kahl).
modify region growing 3D to work with low seed point value
Apr 28 2021, 12:06 PM
kahl committed rMITK068b2c265ba8: avoid underflows (authored by kahl).
avoid underflows
Apr 28 2021, 12:06 PM
kahl committed rMITKa3ee5afa1b98: modify region growing 3D to work with low seed point value (authored by kahl).
modify region growing 3D to work with low seed point value
Apr 28 2021, 12:06 PM
kahl closed T28437: 3D region growing may have issues when the seed point is on a pixel with value 0 as Resolved by committing rMITKa3ee5afa1b98: modify region growing 3D to work with low seed point value.
Apr 28 2021, 12:06 PM · MITK (v2021.10)

Apr 23 2021

kahl added a revision to T28437: 3D region growing may have issues when the seed point is on a pixel with value 0: Unknown Object (Differential Revision).
Apr 23 2021, 10:26 AM · MITK (v2021.10)
kahl added a comment to T28437: 3D region growing may have issues when the seed point is on a pixel with value 0.

Pushed new branch to rMITK MITK: bugfix/T28437-RegionGrowing3DSeedPoint0.

Apr 23 2021, 10:02 AM · MITK (v2021.10)

Apr 15 2021

kahl claimed T28437: 3D region growing may have issues when the seed point is on a pixel with value 0.
Apr 15 2021, 10:45 AM · MITK (v2021.10)
kahl moved T28437: 3D region growing may have issues when the seed point is on a pixel with value 0 from Segmentation to Cycle on the MITK (v2021.10) board.
Apr 15 2021, 10:44 AM · MITK (v2021.10)

Jan 27 2021

kahl triaged T28224: [Point Set] List of points is not shown if plugin opened after data loading as Normal priority.
Jan 27 2021, 3:51 PM · MITK (v2021.02)
kahl triaged T28213: [Point Set] Clear current time step does not work as Normal priority.
Jan 27 2021, 1:28 PM · MITK (v2021.02)
kahl triaged T28212: [Point Set] Only points for time step 0 are listed as Normal priority.
Jan 27 2021, 1:20 PM · MITK (v2021.02)

Nov 17 2020

kahl added a comment to T27564: [Segmentation] Integrate deep learning methods for Segmentation in MITK.

Deleted branch feature/T27564-integrate-deeplearning-segmentation-V2.

Nov 17 2020, 10:54 AM · MITK
kahl added a comment to T27564: [Segmentation] Integrate deep learning methods for Segmentation in MITK.

Deleted branch feature/T27564-integrate-deeplearning-segmentation-evaluation.

Nov 17 2020, 10:54 AM · MITK
kahl added a comment to T27564: [Segmentation] Integrate deep learning methods for Segmentation in MITK.

Deleted branch feature/T27564-integrate-deeplearning-segmentation.

Nov 17 2020, 10:54 AM · MITK
kahl added a comment to T27500: Use Python/C-API for execution of Python Code with MITK-Python-Service.

Deleted branch feature/T27500-use-PythonCApi-in-python-service-V2.

Nov 17 2020, 10:54 AM · MITK
kahl added a comment to T27500: Use Python/C-API for execution of Python Code with MITK-Python-Service.

Deleted branch feature/T27500-use-PythonCApi-in-python-service.

Nov 17 2020, 10:54 AM · MITK

Nov 5 2020

kahl closed T27501: Reimplement image transfer between MITK and Python as Resolved.

This task can be closed. Future work on this is done in T27923.

Nov 5 2020, 8:13 AM · MITK
kahl closed T27501: Reimplement image transfer between MITK and Python, a subtask of T27499: Reimplement MITK-Python-Service, as Resolved.
Nov 5 2020, 8:13 AM · MITK
kahl closed T27564: [Segmentation] Integrate deep learning methods for Segmentation in MITK as Resolved.

This task can be closed. Future work on this is done in T27923.

Nov 5 2020, 8:12 AM · MITK
kahl closed T27500: Use Python/C-API for execution of Python Code with MITK-Python-Service, a subtask of T27499: Reimplement MITK-Python-Service, as Resolved.
Nov 5 2020, 8:12 AM · MITK
kahl closed T27500: Use Python/C-API for execution of Python Code with MITK-Python-Service as Resolved.

This task can be closed. Future work on this is done in T27923.

Nov 5 2020, 8:12 AM · MITK
kahl closed T27499: Reimplement MITK-Python-Service as Resolved.

This task can be closed. Future work on this is done in T27923.

Nov 5 2020, 8:11 AM · MITK

Nov 4 2020

kahl added a comment to T27923: Integrate possibility to execute Python Code in MITK .

Pushed new branch feature/T27923-python-dev.

Nov 4 2020, 4:37 PM · MITK

Nov 3 2020

kahl added a comment to T27923: Integrate possibility to execute Python Code in MITK .

Pushed new branch feature/T27923-execute-python-code-in-mitk.

Nov 3 2020, 3:15 PM · MITK
kahl triaged T27923: Integrate possibility to execute Python Code in MITK as Normal priority.
Nov 3 2020, 8:34 AM · MITK

Aug 10 2020

kahl added a comment to T27564: [Segmentation] Integrate deep learning methods for Segmentation in MITK.

Pushed new branch feature/T27564-integrate-deeplearning-segmentation-evaluation.

Aug 10 2020, 5:36 PM · MITK

Jul 31 2020

kahl added a comment to T27500: Use Python/C-API for execution of Python Code with MITK-Python-Service.

Pushed new branch feature/T27500-use-PythonCApi-in-python-service-V2.

Jul 31 2020, 9:58 AM · MITK

Jul 30 2020

kahl placed T27107: [MITKDoc] Revise Screenshot Maker Plugin Documentation up for grabs.
Jul 30 2020, 11:26 AM · Cleared, MITK (v2021.02)
kahl placed T27101: [MITKDoc] Revise Logging Plugin Documentation up for grabs.
Jul 30 2020, 11:25 AM · Cleared, MITK (v2021.02)

Jul 29 2020

kahl added a comment to T27324: Investigate MITK <--> python image transfer.

Seems like I figured it out. What I had to do was to change SWIG_TypeQuery("_p_mitk__Image") to SWIG_TypeQuery("_p_itk__SmartPointerT_mitk__Image_t") and change the type of image to mitk::Image::Pointer *image. When passing Pic3D now and printing the number of dimensions, 3 is printed as one would expect. I will further investigate how to interact with other libraries like SimpleITK.

Jul 29 2020, 4:56 PM · MITK
kahl added a comment to T27324: Investigate MITK <--> python image transfer.

I tried an approach like @floca suggested with the SWIG wrapping that is already available in MITK. Here is my code to transfer a MITK image from C++ to Python:

Jul 29 2020, 3:59 PM · MITK

Jul 28 2020

kahl added a comment to T27600: [SWIG] building pyMITK leads to access violation.

If you use Python 3.7/3.8, you need to install SWIG version 4.0.2. This solves the problem. Currently, SWIG version 3.0.2. is installed in the Superbuild.

Jul 28 2020, 5:17 PM · MITK

Jul 24 2020

kahl triaged T27600: [SWIG] building pyMITK leads to access violation as Normal priority.
Jul 24 2020, 2:11 PM · MITK

Jul 21 2020

kahl added a comment to T27564: [Segmentation] Integrate deep learning methods for Segmentation in MITK.

Pushed new branch feature/T27564-integrate-deeplearning-segmentation-V2.

Jul 21 2020, 1:21 PM · MITK

Jul 16 2020

kahl added a comment to T27564: [Segmentation] Integrate deep learning methods for Segmentation in MITK.

Pushed new branch feature/T27564-integrate-deeplearning-segmentation.

Jul 16 2020, 6:44 PM · MITK
kahl triaged T27564: [Segmentation] Integrate deep learning methods for Segmentation in MITK as Normal priority.
Jul 16 2020, 11:45 AM · MITK

Jul 15 2020

kahl triaged T27561: Clients for building pyMITK Project as Normal priority.
Jul 15 2020, 1:14 PM · Request for Discussion, MITK, CI

Jul 8 2020

kalali awarded T26973: [Segmentation] RegionGrowing3D preview only in 3D Widget a Cup of Joe token.
Jul 8 2020, 12:30 PM · MITK (v2021.02)
kahl added a comment to T26978: [Segmentation] Autocrop with MITK Multilabel Image Reader does not work with multilabel images.

@kalali I can confirm that there is no option to use autocrop when using the ITK NrrdImageIO reader. However, when you load an image with the ITK reader (I used MultiLabel/Pic3DAsMultilabelImage.nrrd as well) and you convert it to a segmentation
(Right click ->Convert to segmentation) and then autocrop the new segmentation node, the name also changes to "No Name". So it might be a general problem when autocropping.

Jul 8 2020, 11:45 AM · Request for Discussion, Missing Info, MITK (v2021.02)
kahl closed T26973: [Segmentation] RegionGrowing3D preview only in 3D Widget as Resolved.

As the bug couldn't be reproduced, it can be closed.

Jul 8 2020, 11:39 AM · MITK (v2021.02)

Jul 6 2020

kahl triaged T27534: Generate batch file for PluginGenerator as Low priority.
Jul 6 2020, 4:04 PM · Next Milestone, MITK

Jul 2 2020

kahl added a comment to T26973: [Segmentation] RegionGrowing3D preview only in 3D Widget.

I couldn't reproduce it myself and to be honest, I don't know which picture I took when the bug occured. @thomass Do you still know more about this bug? I think we encountered it when we were testing with the Checklists.

Jul 2 2020, 4:45 PM · MITK (v2021.02)

Jun 29 2020

kahl added a comment to T27500: Use Python/C-API for execution of Python Code with MITK-Python-Service.

Pushed new branch feature/T27500-use-PythonCApi-in-python-service.

Jun 29 2020, 3:44 PM · MITK

Jun 23 2020

kahl triaged T27501: Reimplement image transfer between MITK and Python as Normal priority.
Jun 23 2020, 5:14 PM · MITK
kahl triaged T27500: Use Python/C-API for execution of Python Code with MITK-Python-Service as Normal priority.
Jun 23 2020, 4:55 PM · MITK
kahl triaged T27499: Reimplement MITK-Python-Service as Normal priority.
Jun 23 2020, 4:44 PM · MITK

Feb 17 2020

kahl committed rMITKe1c1e8aa494b: removed cancel, added option for default network (authored by kahl).
removed cancel, added option for default network
Feb 17 2020, 10:50 AM

Feb 14 2020

kahl committed rMITK9c67bc4b21be: Update logging documentation (authored by kahl).
Update logging documentation
Feb 14 2020, 3:26 PM
kahl claimed T27107: [MITKDoc] Revise Screenshot Maker Plugin Documentation.
Feb 14 2020, 3:07 PM · Cleared, MITK (v2021.02)
kahl claimed T27101: [MITKDoc] Revise Logging Plugin Documentation.
Feb 14 2020, 2:08 PM · Cleared, MITK (v2021.02)

Feb 13 2020

kahl committed rMITK183917ff31f6: removed cancel, added option for default network (authored by kahl).
removed cancel, added option for default network
Feb 13 2020, 3:55 PM

Feb 12 2020

kahl committed rMITKdca0343de07e: registered mitk::Image::Pointer as QT Metatype (authored by kahl).
registered mitk::Image::Pointer as QT Metatype
Feb 12 2020, 9:43 AM

Feb 11 2020

kahl committed rMITKddb466cc34c7: changed threading to QThread with worker class (authored by kahl).
changed threading to QThread with worker class
Feb 11 2020, 4:41 PM

Feb 5 2020

kahl committed rMITK360ad74ae787: first version of segmentation plugin using C/Python API (authored by kahl).
first version of segmentation plugin using C/Python API
Feb 5 2020, 9:19 AM

Jan 23 2020

kahl added a comment to T25067: Python crashes on destruction of ctkAbstractPythonManager.

I encountered the same error. Is there any solution for this problem?

Jan 23 2020, 3:55 PM · MITK

Jan 20 2020

kahl committed rMITK1221316cb5db: Port mitk tests to CPPUnit (authored by kahl).
Port mitk tests to CPPUnit
Jan 20 2020, 9:32 AM

Jan 17 2020

kahl committed rMITK43a77cff3c23: resolved merge conflicts (authored by kahl).
resolved merge conflicts
Jan 17 2020, 10:08 AM
kahl added a comment to T24271: Port tests from old mitk test macros to CPPUNIT.

Pushed new branch T24271-port-more-tests-2-integration.

Jan 17 2020, 10:08 AM · MITK

Jan 13 2020

kahl added a comment to T26964: Version number not correctly displayed in Debug mode.

The error might occur because I cloned MITK from github

Jan 13 2020, 2:13 PM · MITK

Jan 9 2020

kahl triaged T26981: [Segmentation] Multiple Segmentations under one parent node aren't displayed as High priority.
Jan 9 2020, 1:28 PM · Cleared, MITK (v2021.02)
kahl triaged T26979: Error when loading a measurement or pointset and then an image as Normal priority.
Jan 9 2020, 10:03 AM · Request for Discussion, Cleared, MITK (v2021.02)
kahl triaged T26978: [Segmentation] Autocrop with MITK Multilabel Image Reader does not work with multilabel images as Normal priority.
Jan 9 2020, 9:56 AM · Request for Discussion, Missing Info, MITK (v2021.02)

Jan 8 2020

kahl triaged T26973: [Segmentation] RegionGrowing3D preview only in 3D Widget as Normal priority.
Jan 8 2020, 3:11 PM · MITK (v2021.02)
kahl triaged T26970: [Segmentation] Picking tool: When no region is picked, selected node just gets unselected as Wishlist priority.
Jan 8 2020, 2:51 PM · MITK (v2021.10), Cleared
kahl triaged T26969: [Segmentation] New segmentation dialog: Change color twice and aborting the second time chages color to red as Low priority.
Jan 8 2020, 2:49 PM · MITK
kahl added a comment to T26966: [Segmentation] Help button in threshold dialogs have no function.

This might be related to task T13033

Jan 8 2020, 2:16 PM · MITK
kahl triaged T26966: [Segmentation] Help button in threshold dialogs have no function as Normal priority.
Jan 8 2020, 2:14 PM · MITK
kahl triaged T26964: Version number not correctly displayed in Debug mode as Normal priority.
Jan 8 2020, 10:57 AM · MITK

Mar 22 2019

kahl placed T26170: Integration of REST Module up for grabs.
Mar 22 2019, 3:23 PM · MITK
kahl added a comment to T26170: Integration of REST Module.

My CppRestSdk and CppRestSdkQt modules are now integrated. I also added a doxygen file as a guide for how to use the module but I'm not sure whether this is displayed correctly, so this needs to be checked. In the end it should be on the doxygen page in the section Module Manuals (e.g. as Chart documentation).
If this is checked, the branch can be integrated in the master.

Mar 22 2019, 3:15 PM · MITK
kahl committed rMITKf193c9efdd8a: added doxygen module manual (authored by kahl).
added doxygen module manual
Mar 22 2019, 3:09 PM
kahl committed rMITK2d1e095159f9: removed testing plugin (authored by kahl).
removed testing plugin
Mar 22 2019, 11:06 AM
kahl committed rMITK43e5d07c86e6: Merge remote-tracking branch 'origin/personal/kahl/rest-microservice-seperate… (authored by kahl).
Merge remote-tracking branch 'origin/personal/kahl/rest-microservice-seperate…
Mar 22 2019, 11:06 AM
kahl committed rMITKf4b1d5b2d129: added documentation (authored by kahl).
added documentation
Mar 22 2019, 9:26 AM
kahl committed rMITKe6b05fdbbd68: declared member of RESTManager as private (authored by kahl).
declared member of RESTManager as private
Mar 22 2019, 8:34 AM

Mar 21 2019

kahl committed rMITK5e28447e1798: created one cpprest example plugin with two views, one for server and one for… (authored by kahl).
created one cpprest example plugin with two views, one for server and one for…
Mar 21 2019, 3:36 PM
kahl committed rMITK05c931e79777: replaced push_back by emplace_back when multiple tasks are created (authored by kahl).
replaced push_back by emplace_back when multiple tasks are created
Mar 21 2019, 2:43 PM
kahl committed rMITKadd1489fad6b: added json data as member in tests (authored by kahl).
added json data as member in tests
Mar 21 2019, 2:12 PM
kahl committed rMITKaedcc2439857: checking if getting service went right in setUp() method (authored by kahl).
checking if getting service went right in setUp() method
Mar 21 2019, 1:34 PM
kahl committed rMITK3a155788b658: changed order of parameters for Notify method, renamed ServerUnderPort to… (authored by kahl).
changed order of parameters for Notify method, renamed ServerUnderPort to…
Mar 21 2019, 1:04 PM
kahl committed rMITK32e8dc330221: added default for switch case in SendRequest, minimized output (authored by kahl).
added default for switch case in SendRequest, minimized output
Mar 21 2019, 11:45 AM
kahl added a comment to T26170: Integration of REST Module.

Pushed new branch T26170-integration-of-rest-module.

Mar 21 2019, 11:00 AM · MITK
kahl triaged T26170: Integration of REST Module as Wishlist priority.
Mar 21 2019, 10:58 AM · MITK
kahl committed rMITK4e2147cb34fe: changed order of comparison (authored by kahl).
changed order of comparison
Mar 21 2019, 10:54 AM
kahl committed rMITK932caf07048d: changed server member to private (authored by kahl).
changed server member to private
Mar 21 2019, 10:30 AM
kahl committed rMITK7e86f7b7f590: changed json value in Notify and Handle method to const (authored by kahl).
changed json value in Notify and Handle method to const
Mar 21 2019, 10:10 AM