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Fri, Sep 29

kislinsk added a comment to T30213: Poco fails to build if the library names of OpenSSL are not libcrypto.lib and libssl.lib.

Deleted branch from rMITK MITK: bugfix/T30213-PocoOpenSSL.

Fri, Sep 29, 2:53 PM · MITK (v2023.10)
kislinsk closed T30213: Poco fails to build if the library names of OpenSSL are not libcrypto.lib and libssl.lib as Resolved by committing rMITK859410e34da9: Fix CMake build of Poco Crypto with custom libcrypto.lib names.
Fri, Sep 29, 2:53 PM · MITK (v2023.10)

Thu, Sep 28

kislinsk added a comment to T30213: Poco fails to build if the library names of OpenSSL are not libcrypto.lib and libssl.lib.

Pushed new branch to rMITK MITK: bugfix/T30213-PocoOpenSSL.

Thu, Sep 28, 3:23 PM · MITK (v2023.10)
kislinsk added a revision to T30213: Poco fails to build if the library names of OpenSSL are not libcrypto.lib and libssl.lib: Restricted Differential Revision.
Thu, Sep 28, 11:57 AM · MITK (v2023.10)
kislinsk updated the task description for T30213: Poco fails to build if the library names of OpenSSL are not libcrypto.lib and libssl.lib.
Thu, Sep 28, 11:01 AM · MITK (v2023.10)
kislinsk triaged T30213: Poco fails to build if the library names of OpenSSL are not libcrypto.lib and libssl.lib as High priority.
Thu, Sep 28, 11:00 AM · MITK (v2023.10)

Wed, Sep 27

floca added a comment to T30207: Add org.mitk.gui.qt.dicominspector to release.

I think in doubt I would just move but not merge it for now. If we see that it is needed or wanted we can make the effort and merge it. It would be better than not offering this feature at all.

Wed, Sep 27, 11:01 AM · Request for Discussion, MITK (v2023.10)
floca added a project to T30207: Add org.mitk.gui.qt.dicominspector to release: Request for Discussion.

The dicom inspector has one additional dependency to module MITKDICOM. Therefore if we merge the inspector plugins also our normal inspector could only be build if DICOM module is activated. (Which it currently is per default).

Wed, Sep 27, 10:56 AM · Request for Discussion, MITK (v2023.10)
floca claimed T30210: [SEG] Add dedicated reader for label image stack support.
Wed, Sep 27, 10:50 AM · MITK (v2023.10)
floca claimed T30209: [SEG] Add a writer for label image stack support.
Wed, Sep 27, 10:49 AM · MITK (v2023.10)
floca claimed T27718: Miniapp for basic DICOM testing.
Wed, Sep 27, 10:39 AM · MITK (v2023.10), Kaapana (internal)

Tue, Sep 26

kompan added a comment to T27813: Curve Description Parameters View progress bar 99%.

In fact, this problem occurs not just for the progress bar, but the progress itself, e.g. also in the info box 1 is currently never reached even if the descriptive parameter calculation process is finished. The reason for this bug is that the progress is stored in a member variable which is updated after the progress event is invoked. Therefore, the progress variable is always lagging one update behind. This is fixed by changing the order of the called functions.
The fix is done for the descriptive parameter calculation, but also for the pixel and ROI-wise fitting.

Tue, Sep 26, 9:19 AM · MITK (v2023.10)

Wed, Sep 20

kompan removed a project from T30205: Check and update perfusion user manual: Request for Discussion.
Wed, Sep 20, 11:29 AM · MITK (v2023.10)
kompan added a comment to T30205: Check and update perfusion user manual.

Integrate into F1 help. Make MITK ModelFit Webpage deprecated for manual section with link to doxygen documentation.

Wed, Sep 20, 11:29 AM · MITK (v2023.10)
kompan moved T30205: Check and update perfusion user manual from Backlog to MITK Meeting on the Request for Discussion board.
Wed, Sep 20, 11:25 AM · MITK (v2023.10)
kompan removed a project from T30207: Add org.mitk.gui.qt.dicominspector to release: Request for Discussion.
Wed, Sep 20, 11:19 AM · Request for Discussion, MITK (v2023.10)
kompan added a comment to T30207: Add org.mitk.gui.qt.dicominspector to release.

It is a useful feature and should be part of the next release.

Wed, Sep 20, 11:18 AM · Request for Discussion, MITK (v2023.10)
kompan added a project to T30205: Check and update perfusion user manual: Request for Discussion.
Wed, Sep 20, 9:56 AM · MITK (v2023.10)

Fri, Sep 15

kompan closed T30199: Update checklist for Perfusion Curve Description Parameters as Resolved.
Fri, Sep 15, 9:43 AM · MITK (v2023.10)
kompan removed a project from T27813: Curve Description Parameters View progress bar 99%: Cleared.
Fri, Sep 15, 9:41 AM · MITK (v2023.10)

Mon, Sep 11

floca placed T29392: [SEG] Add dedicated writer to store multi-label images in nifti up for grabs.
Mon, Sep 11, 3:01 PM · MITK (v2023.10)
floca triaged T30210: [SEG] Add dedicated reader for label image stack support as Normal priority.
Mon, Sep 11, 3:00 PM · MITK (v2023.10)
floca updated the task description for T30209: [SEG] Add a writer for label image stack support.
Mon, Sep 11, 2:36 PM · MITK (v2023.10)
floca triaged T30209: [SEG] Add a writer for label image stack support as Normal priority.
Mon, Sep 11, 2:36 PM · MITK (v2023.10)
floca triaged T30208: [SEG] Add support to read/write stack of label images from/to a mitk label image as Normal priority.
Mon, Sep 11, 2:34 PM · MITK (v2023.10)
floca renamed T29392: [SEG] Add dedicated writer to store multi-label images in nifti from [Segmentation] Add dedicated writer to store multi-label images in nifti to [SEG] Add dedicated writer to store multi-label images in nifti.
Mon, Sep 11, 1:58 PM · MITK (v2023.10)
floca moved T30207: Add org.mitk.gui.qt.dicominspector to release from Backlog to MITK Meeting on the Request for Discussion board.
Mon, Sep 11, 11:43 AM · Request for Discussion, MITK (v2023.10)
floca triaged T30207: Add org.mitk.gui.qt.dicominspector to release as Normal priority.
Mon, Sep 11, 11:43 AM · Request for Discussion, MITK (v2023.10)
kompan triaged T30206: Parameter naming in mitkPixelBasedParameterFitImageGeneratorTest and mitkROIBasedParameterFitImageGenerator as Normal priority.
Mon, Sep 11, 11:05 AM · MITK (v2023.10)
kompan triaged T30205: Check and update perfusion user manual as Normal priority.
Mon, Sep 11, 8:14 AM · MITK (v2023.10)
kompan triaged T30204: Improve visibility between help files for perfusion as Normal priority.
Mon, Sep 11, 8:10 AM · MITK (v2023.10)
kompan moved T30202: Provide checklist for ModelFit Generic Data Fitting from Backlog to Tests/Checklists on the MITK (v2023.10) board.
Mon, Sep 11, 8:01 AM · MITK (v2023.10)
kompan moved T30203: Provide checklist for Fit Generator Demo from Backlog to Tests/Checklists on the MITK (v2023.10) board.
Mon, Sep 11, 8:01 AM · MITK (v2023.10)
kompan triaged T30203: Provide checklist for Fit Generator Demo as Normal priority.
Mon, Sep 11, 8:01 AM · MITK (v2023.10)
kompan triaged T30202: Provide checklist for ModelFit Generic Data Fitting as Normal priority.
Mon, Sep 11, 8:00 AM · MITK (v2023.10)
kompan moved T30201: Provide checklist for ModelFit Inspector View from Backlog to Tests/Checklists on the MITK (v2023.10) board.
Mon, Sep 11, 7:56 AM · MITK (v2023.10)
kompan triaged T30201: Provide checklist for ModelFit Inspector View as Normal priority.
Mon, Sep 11, 7:48 AM · MITK (v2023.10)
kompan moved T30200: Update checklist for Perfusion DCE MRI Perfusion Datafit from Backlog to Tests/Checklists on the MITK (v2023.10) board.
Mon, Sep 11, 7:46 AM · MITK (v2023.10)
kompan triaged T30200: Update checklist for Perfusion DCE MRI Perfusion Datafit as Normal priority.
Mon, Sep 11, 7:46 AM · MITK (v2023.10)
kompan moved T30199: Update checklist for Perfusion Curve Description Parameters from Backlog to Tests/Checklists on the MITK (v2023.10) board.
Mon, Sep 11, 7:45 AM · MITK (v2023.10)
kompan triaged T30199: Update checklist for Perfusion Curve Description Parameters as Normal priority.
Mon, Sep 11, 7:45 AM · MITK (v2023.10)
kompan moved T30198: Update checklist for Perfusion Concentration Curve Converter from Backlog to Tests/Checklists on the MITK (v2023.10) board.
Mon, Sep 11, 7:43 AM · MITK (v2023.10)
kompan triaged T30198: Update checklist for Perfusion Concentration Curve Converter as Normal priority.
Mon, Sep 11, 7:43 AM · MITK (v2023.10)
kompan removed a project from T27350: Refactoring of T1 map calculation/selection for perfusion and CEST: Cleared.
Mon, Sep 11, 7:39 AM · MITK (v2023.10)
kompan claimed T29638: ModelFit Inspector crahes sometimes on data selection.
Mon, Sep 11, 7:07 AM · MITK (v2023.10)
kompan edited projects for T29638: ModelFit Inspector crahes sometimes on data selection, added: MITK (v2023.10); removed MITK.
Mon, Sep 11, 7:04 AM · MITK (v2023.10)

Thu, Sep 7

floca added a comment to T30157: [DCM][SEG] potential in compliance to DICOM segmentation: clarify correct use of pixel value/segment number.

offer the feature to take an instance UID that is an int as the pixel value.

Not sure if I understand it correctly, but ... DICOM UID cannot have int as the value - this would violate VR constraints.

Thu, Sep 7, 5:40 PM · Missing Info, Request for Discussion, MITK (v2023.10)
fedorov added a comment to T30157: [DCM][SEG] potential in compliance to DICOM segmentation: clarify correct use of pixel value/segment number.

offer the feature to take an instance UID that is an int as the pixel value.

Thu, Sep 7, 5:19 PM · Missing Info, Request for Discussion, MITK (v2023.10)
floca claimed T29204: [SEG] Rework properties of Label class + add instance information.
Thu, Sep 7, 12:38 PM · MITK (v2023.10), Breaking Change
floca added a comment to T30157: [DCM][SEG] potential in compliance to DICOM segmentation: clarify correct use of pixel value/segment number.

T29204 should be done before as we need to store the information in an appropriate way. The most important thing is that we have then a property to store the instance UID. The default UID is the pixelvalue if not overwritten by the user or another configuration. Regarding the persistance of the pixel value I see two option:
a) Leave with the fact (and document it) that DICOM Seg is not "loss less" regarding the pixel value. So after saving to and loading from DICOM Seg your label will have the same (class) name and instance UID but might have a different pixel value.
b) offer the feature to take an instance UID that is an int as the pixel value. But this is only possible if we assure in our UI that you cannot use/change into an instance UID in a Segmentation that is alrready used there by another label.
Currently I would lean to a) and generate a new ticket for b) and see if we need it in the future.

Thu, Sep 7, 12:37 PM · Missing Info, Request for Discussion, MITK (v2023.10)