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Jun 27 2019

kislinsk committed rMITKba0f0a12de88: Merge branch 'T26434-ArcanistBaseCommitRule' (authored by kislinsk).
Merge branch 'T26434-ArcanistBaseCommitRule'
Jun 27 2019, 3:17 PM
kislinsk committed rMITKb896905de03d: Set base commit rule to origin/master (authored by kislinsk).
Set base commit rule to origin/master
Jun 27 2019, 3:17 PM
kislinsk added a comment to T26434: Set base commit rule for arcanist to origin/master.

Pushed new branch T26434-ArcanistBaseCommitRule.

Jun 27 2019, 3:16 PM · MITK
kislinsk triaged T26434: Set base commit rule for arcanist to origin/master as Wishlist priority.
Jun 27 2019, 3:15 PM · MITK
kislinsk committed rMITK1e41f85102cf: Set base commit rule to origin/master (authored by kislinsk).
Set base commit rule to origin/master
Jun 27 2019, 3:14 PM
nolden committed rMITKb215d08c5417: Compilation fixes for recent GCC and clang compilers (authored by nolden).
Compilation fixes for recent GCC and clang compilers
Jun 27 2019, 2:27 PM
nolden added a revision to T26431: Fix gcc 9 and clang 8 compilation: Unknown Object (Differential Revision).
Jun 27 2019, 2:19 PM · MITK
nolden committed rMITKcd9f24b3ede4: Fixed some exception handling code to be more correct (authored by nolden).
Fixed some exception handling code to be more correct
Jun 27 2019, 1:40 PM
nolden committed rMITK5011a62ca142: Don't fail on gcc 9 warnings about copy ctors (authored by nolden).
Don't fail on gcc 9 warnings about copy ctors
Jun 27 2019, 1:40 PM
nolden committed rMITK8182f13b5cd9: Fixes for clang compilation (authored by nolden).
Fixes for clang compilation
Jun 27 2019, 1:40 PM
nolden added a comment to T26431: Fix gcc 9 and clang 8 compilation.

Pushed new branch T26431-compilation-fixes-gcc9-clang8.

Jun 27 2019, 1:40 PM · MITK
kislinsk added a comment to T26427: Support software rendering.

VTK has a little bug in vtkShader.cxx around line 76: GLuint handle = glCreateShader(type);. The handle is not tested against 0 which leads into a misleading error message like above. The actual problem is that vertex and fragment shaders can be created (and compiled successfully) but not geometry shaders.

Jun 27 2019, 11:47 AM · Auto-closed, MITK
kislinsk added a comment to T26427: Support software rendering.

Our example steps do not work, they start however. Render window is just black.

Jun 27 2019, 11:17 AM · Auto-closed, MITK
kislinsk added a comment to T26427: Support software rendering.

Also experimented with environment variable QT_OPENGL=software and QT_OPENGL=angle. VTK's GLEW is already unable to initialize with these settings.

Jun 27 2019, 11:04 AM · Auto-closed, MITK
kislinsk added a comment to T26427: Support software rendering.

Our example steps do not work, they start however. Render window is just black.

Jun 27 2019, 10:43 AM · Auto-closed, MITK
nolden triaged T26431: Fix gcc 9 and clang 8 compilation as Normal priority.
Jun 27 2019, 10:17 AM · MITK
kislinsk lowered the priority of T26413: Nifti2 support from High to Normal.
Jun 27 2019, 10:14 AM · Auto-closed, Missing Info, MITK
neher committed rMITK8207fc098417: Add vtk based nifti2 support for diffusion-weighted images (authored by neher).
Add vtk based nifti2 support for diffusion-weighted images
Jun 27 2019, 9:15 AM
neher added a comment to T26413: Nifti2 support.

Pushed new branch T26413-Nifti2.

Jun 27 2019, 9:14 AM · Auto-closed, Missing Info, MITK
neher closed T26424: [MITK Diffusion] fix tests as Resolved.
Jun 27 2019, 9:13 AM · MITK

Jun 26 2019

kislinsk added a comment to T26427: Support software rendering.

Potential conflicts: Multiple render windws, Qt resp. shared OpenGL context with Qt.

Jun 26 2019, 4:47 PM · Auto-closed, MITK
kislinsk committed rMITK74c6743b04b8: Make some external projects customizable (authored by kislinsk).
Make some external projects customizable
Jun 26 2019, 3:46 PM
kislinsk added a comment to T26427: Support software rendering.

I tried the VTK MarbleShader example and it works.

Jun 26 2019, 3:13 PM · Auto-closed, MITK
kislinsk added a parent task for T26427: Support software rendering: Unknown Object (Maniphest Task).
Jun 26 2019, 2:08 PM · Auto-closed, MITK
kislinsk added a comment to T26427: Support software rendering.

Tried every combination of options but it's always the same error:

Jun 26 2019, 1:56 PM · Auto-closed, MITK
kalali added a comment to T26427: Support software rendering.

Important for T26144 (and also open office virtual desktops).

Jun 26 2019, 1:45 PM · Auto-closed, MITK
kislinsk added a comment to T26427: Support software rendering.

64bit builds of Mesa 3D for Windows: https://github.com/pal1000/mesa-dist-win/releases

Jun 26 2019, 1:38 PM · Auto-closed, MITK
kislinsk triaged T26427: Support software rendering as High priority.
Jun 26 2019, 1:24 PM · Auto-closed, MITK
kislinsk committed rMPT5e8c6cda712d: Fix typo (authored by kislinsk).
Fix typo
Jun 26 2019, 12:43 PM
kislinsk closed T26426: Allow customization of MITK's external projects in MITK extensions as Resolved.

Added ITK example to project template.

Jun 26 2019, 12:37 PM · MITK
kislinsk committed rMPT1319420eb24c: Add example for external project customization (authored by kislinsk).
Add example for external project customization
Jun 26 2019, 12:36 PM
kislinsk committed rMITK56f4510095c2: Merge branch 'T26426-EPCustomization' into releases/2018-04 (authored by kislinsk).
Merge branch 'T26426-EPCustomization' into releases/2018-04
Jun 26 2019, 12:35 PM
kislinsk committed rMITK5d11f7b252c0: Make ITK customizable (authored by kislinsk).
Make ITK customizable
Jun 26 2019, 12:34 PM
kislinsk committed rMITK8dc104a80cb8: Add macro to query custom external project variables (authored by kislinsk).
Add macro to query custom external project variables
Jun 26 2019, 12:34 PM
kislinsk added a comment to T26426: Allow customization of MITK's external projects in MITK extensions.

Pushed new branch T26426-EPCustomization.

Jun 26 2019, 12:33 PM · MITK
kislinsk triaged T26426: Allow customization of MITK's external projects in MITK extensions as Wishlist priority.
Jun 26 2019, 12:31 PM · MITK
kislinsk committed rMITKa6c9f34731a7: Merge remote-tracking branch 'maleike/build-no-qt-designer-plugins' into… (authored by kislinsk).
Merge remote-tracking branch 'maleike/build-no-qt-designer-plugins' into…
Jun 26 2019, 10:51 AM
maleike committed rMITK0ab131ef16c4: Add options to skip building the Qt designer plugins (authored by maleike).
Add options to skip building the Qt designer plugins
Jun 26 2019, 10:51 AM
kislinsk committed rMITK395885d63939: Merge remote-tracking branch 'maleike/mitkSetupCPack-fix-quoting' into… (authored by kislinsk).
Merge remote-tracking branch 'maleike/mitkSetupCPack-fix-quoting' into…
Jun 26 2019, 10:51 AM
maleike committed rMITK642c83a462bf: Fix quoting (authored by maleike).
Fix quoting
Jun 26 2019, 10:51 AM
kislinsk closed T26417: Create MITK 2018.04.2 installers with Nvidia AIAA v1.0.1 as Resolved.
Jun 26 2019, 10:25 AM · MITK
neher committed rMITKacc582626282: Merge branch 'T26424-FixTests' (authored by neher).
Merge branch 'T26424-FixTests'
Jun 26 2019, 9:58 AM
neher committed rMITK415f37e803af: Fix parameter mode initialization (authored by neher).
Fix parameter mode initialization
Jun 26 2019, 9:57 AM
neher added a comment to T26424: [MITK Diffusion] fix tests.

Pushed new branch T26424-FixTests.

Jun 26 2019, 9:57 AM · MITK
neher committed rMD1d08aea3b400: Update fiber fit test data (authored by neher).
Update fiber fit test data
Jun 26 2019, 9:56 AM
neher triaged T26424: [MITK Diffusion] fix tests as Normal priority.
Jun 26 2019, 9:26 AM · MITK
neher closed T26285: [MITK Diffusion] Fiber fitting regularization as Resolved.
Jun 26 2019, 8:43 AM · MITK

Jun 25 2019

kalali committed rMITK4c13c7530227: Add experimental button / function to reinit segmentation (authored by kalali).
Add experimental button / function to reinit segmentation
Jun 25 2019, 4:42 PM
kalali committed rMITK5911ebe085f1: Merge branch 'T22946-Integration-beta' into T25767-BlackSwan-release (authored by kalali).
Merge branch 'T22946-Integration-beta' into T25767-BlackSwan-release
Jun 25 2019, 4:42 PM
kalali committed rMITK7bd724c71b3d: Merge branch 'T22946-Integration-beta' into T25767-BlackSwan-release (authored by kalali).
Merge branch 'T22946-Integration-beta' into T25767-BlackSwan-release
Jun 25 2019, 4:42 PM
kalali committed rMITK357d61a7ac19: Use try-catch and qmessage for add-action to conform to the last semantic… (authored by kalali).
Use try-catch and qmessage for add-action to conform to the last semantic…
Jun 25 2019, 4:42 PM
kislinsk closed T26422: Start menu shortcut to MITK Workbench missing in Windows installer as Invalid.
Jun 25 2019, 3:28 PM · MITK
kislinsk added a comment to T26422: Start menu shortcut to MITK Workbench missing in Windows installer.

Works with NSIS 2.51.

Jun 25 2019, 3:11 PM · MITK
groehl closed T24960: Deep learning telegram server as Wontfix.
Jun 25 2019, 1:34 PM · IMSY, Restricted Project
kislinsk triaged T26422: Start menu shortcut to MITK Workbench missing in Windows installer as Unbreak Now! priority.
Jun 25 2019, 12:44 PM · MITK
neher committed rMITK1a528f26826d: Merge branch 'T26285-FitRegu' (authored by neher).
Merge branch 'T26285-FitRegu'
Jun 25 2019, 12:16 PM
neher triaged T26421: [CmdInterface] process special characters as Wishlist priority.
Jun 25 2019, 9:56 AM
neher triaged T26420: [MITK Diffusion] Check angular threshold as Normal priority.
Jun 25 2019, 9:55 AM · MITK
neher triaged T26419: [CmdInterface] nested python function as Normal priority.
Jun 25 2019, 9:53 AM
neher created T26419: [CmdInterface] nested python function.
Jun 25 2019, 9:53 AM
neher renamed T26414: [CmdInterface] ResourceWarning: unclosed file crash from CmdInterface ResourceWarning: unclosed file crash to [CmdInterface] ResourceWarning: unclosed file crash.
Jun 25 2019, 9:52 AM · MITK

Jun 24 2019

kislinsk assigned T26415: Python plugin fails to run on Windows to neher.
Jun 24 2019, 1:45 PM · Auto-closed, MITK
kislinsk triaged T26415: Python plugin fails to run on Windows as Normal priority.
Jun 24 2019, 1:45 PM · Auto-closed, MITK
kislinsk triaged T26413: Nifti2 support as High priority.

@neher Please base the fix on the releases/2018-04 branch.

Jun 24 2019, 1:44 PM · Auto-closed, Missing Info, MITK
kislinsk triaged T26397: Multilabel Segmentation file cannot be converted to multilabel segmentation in MITK as Normal priority.
Jun 24 2019, 1:43 PM · MITK
kislinsk triaged T26370: Buildconfigration mitkNavigationModules is not working as Normal priority.
NOTE: Cleaning up Needs Triage priority queue of MITK.
Jun 24 2019, 1:43 PM · IGT, MITK
kislinsk triaged T26334: Include distortion correction filter as Normal priority.
NOTE: Cleaning up Needs Triage priority queue of MITK.
Jun 24 2019, 1:42 PM · Auto-closed, Restricted Project, IMSY, MITK
kislinsk triaged T26417: Create MITK 2018.04.2 installers with Nvidia AIAA v1.0.1 as Normal priority.
Jun 24 2019, 1:40 PM · MITK
kalali added a project to T26381: QmitkDataStorageComboBox does not react on DICOM node changes: Request for Discussion.
Jun 24 2019, 11:14 AM · Restricted Project, MITK

Jun 21 2019

j562r added a member for MIC: t543a.
Jun 21 2019, 2:03 PM
kalali updated the task description for T26381: QmitkDataStorageComboBox does not react on DICOM node changes.
Jun 21 2019, 1:53 PM · Restricted Project, MITK
kalali renamed T26381: QmitkDataStorageComboBox does not react on DICOM node changes from QmitkDataStorageComboBox does not react on node changes to QmitkDataStorageComboBox does not react on DICOM node changes.
Jun 21 2019, 1:53 PM · Restricted Project, MITK
kalali added a comment to T26381: QmitkDataStorageComboBox does not react on DICOM node changes.

The ChangedNodeEvent of the data storage is not used inside the QmitkDataStorageComboBox. A reason for this might be that the changed node event is sent very often.
Instead, a specific listener for the name property is used in QmitkDataStorageComboBox::InsertNode.

Jun 21 2019, 1:49 PM · Restricted Project, MITK
franza committed rMITKa52bd98b41ee: Started implementing a feature for XML to CSV conversion, not finished yet (authored by franza).
Started implementing a feature for XML to CSV conversion, not finished yet
Jun 21 2019, 12:17 PM
franza added a comment to T26372: Evaluation view for needle calibration test.

Pushed new branch T26372-AddNavigationDataXMLtoCSVFeature.

Jun 21 2019, 12:17 PM · Auto-closed, IGT, MITK
franza moved T26372: Evaluation view for needle calibration test from Backlog to In Progress on the IGT board.
Jun 21 2019, 12:15 PM · Auto-closed, IGT, MITK
franza added a comment to T24287: Support of tracked Ultrasound.

This branch was merged into the master recently. @mittmann Can we close the bug?

Jun 21 2019, 12:13 PM · Restricted Project, MITK, IGT

Jun 20 2019

alexfoxfox created T26415: Python plugin fails to run on Windows.
Jun 20 2019, 6:15 PM · Auto-closed, MITK
neher claimed T26413: Nifti2 support.
Jun 20 2019, 8:16 AM · Auto-closed, Missing Info, MITK
neher triaged T26414: [CmdInterface] ResourceWarning: unclosed file crash as High priority.
Jun 20 2019, 8:16 AM · MITK

Jun 19 2019

goyette created T26413: Nifti2 support.
Jun 19 2019, 2:52 PM · Auto-closed, Missing Info, MITK
k656s added members for NLP: j562r, koehlerg, laie, full, fritzsck.
Jun 19 2019, 1:47 PM
steint committed rMITK6df077b8b1b7: InjectPlugin: add patient image and segmentation image combobox for storing of… (authored by steint).
InjectPlugin: add patient image and segmentation image combobox for storing of…
Jun 19 2019, 1:43 PM
steint committed rMITK2f5e955813e3: Fix deprecated method use (authored by steint).
Fix deprecated method use
Jun 19 2019, 1:43 PM
kislinsk committed rMITK5929d9a8c4ec: Match dashboard script mode with MITK_CTEST_SCRIPT_MODE (authored by kislinsk).
Match dashboard script mode with MITK_CTEST_SCRIPT_MODE
Jun 19 2019, 12:22 PM
kislinsk created NLP.
Jun 19 2019, 9:49 AM

Jun 18 2019

kalali triaged T26410: Create new, theme-aware icon for RenderWindowManager as Normal priority.
Jun 18 2019, 1:26 PM · Restricted Project, MITK
kalali triaged T26409: Create new, theme-aware icon for SemanticRelations as Normal priority.
Jun 18 2019, 1:25 PM · Restricted Project, MITK
kislinsk committed rMITK266f2874df43: Fix if condition (authored by kislinsk).
Fix if condition
Jun 18 2019, 11:30 AM

Jun 17 2019

steint committed rMITK3082bfa06e23: Merge branch 'T26407-fix-include' (authored by steint).
Merge branch 'T26407-fix-include'
Jun 17 2019, 4:45 PM
steint committed rMITKff622a125d73: Fix missing include (authored by steint).
Fix missing include
Jun 17 2019, 4:37 PM
full added a comment to T26397: Multilabel Segmentation file cannot be converted to multilabel segmentation in MITK.

It turned out that if I load the file holding the segmentation alone and the right click -> convert to segmentation, everything works as expected. Only if I load the raw image plus the corresponding segmentation simultaneously (which is my usual workflow), the bug above arises.

Jun 17 2019, 3:56 PM · MITK
kislinsk committed rMITK8e04c69ffa71: Add fallback for shallow clones (authored by kislinsk).
Add fallback for shallow clones
Jun 17 2019, 1:50 PM
kislinsk committed rMITK32bec5d020e8: Prevent spaces in dirty repo descriptions in the first place (authored by kislinsk).
Prevent spaces in dirty repo descriptions in the first place
Jun 17 2019, 1:31 PM
kalali placed T26376: Segmentation plugin does not work correctly with the new mxn multi widget up for grabs.
Jun 17 2019, 12:44 PM · MITK (v2022.10)
floca added a project to T26399: Workbench crash on simple tree model update: Request for Discussion.
Jun 17 2019, 12:38 PM · MITK, Request for Discussion
koehlerg added a member for MIC: m167k.
Jun 17 2019, 10:41 AM
full added a comment to T26397: Multilabel Segmentation file cannot be converted to multilabel segmentation in MITK.

Alright, thanks!

Jun 17 2019, 10:26 AM · MITK
kislinsk edited projects for T26397: Multilabel Segmentation file cannot be converted to multilabel segmentation in MITK, added: MITK (2018-04-4); removed MITK (2018-04).

HI Peter, MITK (2018-04-4) the the current milestone. I nearly missed this task as you put it in the already archived milestone MITK (2018-04). The safest way to raise awareness is to just set the task priority to Needs Triage and stick with the MITK tag. ❤

Jun 17 2019, 10:00 AM · MITK
kislinsk added a hashtag to MITK (2018-04-4): #mitk-2018-04-4.
Jun 17 2019, 9:57 AM