I created a segmentation of Pic3D, however, there is no option to chose DICOM SEG when saving the image. Might be related to the third incompatible commit? Is this really finished as I noticed includes of a cpp file which looks a little bit experimental in that last commit?

Mar 11 2019, 9:46 AM · MITK

kislinsk edited projects for T25988: LabelSetImageIO should support time geometries and property serialization, added: MITK; removed MITK (2018-04).

Mar 11 2019, 9:33 AM · MITK (v2021.02)

kislinsk edited projects for T25939: DICOM data and Nifti Segmentation don't like each other, 3d+t data, added: MITK; removed MITK (2018-04).

Mar 11 2019, 9:32 AM · MITK

kislinsk edited projects for T25798: Saving segmentations as .dcm (DICOM SEG) does not work, added: MITK; removed MITK (2018-04-2).

I cherry-picked the two compatible commits (out of three) into the releases/2018.04 branch.

Mar 11 2019, 9:30 AM · MITK

kislinsk edited projects for T25930: [Segmentation] Fill/Erase crashes at non-zero timestep / Issue with ArbitraryTimeGeometry, added: MITK; removed MITK (2018-04-2).

Mar 11 2019, 9:27 AM · MITK, Restricted Project

kislinsk edited projects for T25774: Segmentation cannot be display when more than one segmetation-raw-image-pair is in Data Manager, added: MITK; removed MITK (2018-04-2).

Mar 11 2019, 9:27 AM · MITK

kislinsk edited projects for T25760: MITK crashes when deleting files from Data Manager, added: MITK; removed MITK (2018-04-2).

Mar 11 2019, 9:27 AM · MITK

Mar 8 2019

floca created T26151: ImageGenerator::GenerateFromReference causes HEAP CORRUPTION.

Mar 8 2019, 5:20 PM · Auto-closed, Restricted Project, MITK

Mar 7 2019

neher closed T26122: [MITK Diffusion] Add eddy constant tau to GUI as Resolved.

Mar 7 2019, 2:44 PM · MITK

neher added a comment to T24973: Add bias fields.

Pushed new branch T24973-Bias.

Mar 7 2019, 2:12 PM · MITK Diffusion

• kraeuter added a comment to T25918: [imageStatisticsCalculator] Rename StatisticsObject to ImageStatisticsObject.

Pushed new branch T25918-RenameStatisticsObject.

Mar 7 2019, 11:06 AM · MITK

Mar 6 2019

neher added a comment to T24973: Add bias fields.

Mar 6 2019, 2:37 PM · MITK Diffusion

neher closed T25409: [MITK Diffusion] Fix tract envelope as DICOM seg as Resolved.

Mar 6 2019, 10:02 AM · MITK

neher added a comment to T25409: [MITK Diffusion] Fix tract envelope as DICOM seg.

Pushed new branch T25409-TractEnvDicomSeg.

Mar 6 2019, 9:58 AM · MITK

neher reopened T25409: [MITK Diffusion] Fix tract envelope as DICOM seg as "Open".

Mar 6 2019, 9:57 AM · MITK

floca closed T24575: Matchpoint documentation is missing some images as Resolved.

Mar 6 2019, 9:08 AM · MITK

floca closed T26055: Add superbuild configuration option "with ModelFit" as Resolved by committing rMITK0e3d88dffd8a: Fixed T26055.

Mar 6 2019, 8:59 AM · Restricted Project, MITK

floca added a revision to T26055: Add superbuild configuration option "with ModelFit": Restricted Differential Revision.

Mar 6 2019, 8:55 AM · Restricted Project, MITK

neher closed T26017: [MITK Diffusion] Somehow mark input and output of cmdapps as Resolved.

Mar 6 2019, 8:35 AM · MITK

neher closed T25409: [MITK Diffusion] Fix tract envelope as DICOM seg as Resolved.

Mar 6 2019, 8:34 AM · MITK

Mar 5 2019

floca closed T24752: UX improvment: Clear btn when hovering over an selection item as Resolved.

Was fixed "by the way". List entries have an "X" now.

Mar 5 2019, 4:03 PM · MITK

floca closed T24752: UX improvment: Clear btn when hovering over an selection item, a subtask of T24197: Multi node selection widget, as Resolved.

Mar 5 2019, 4:03 PM · MITK

floca claimed T23808: Add Rule base class for DICOM source imagereferences.

Mar 5 2019, 3:46 PM · MITK

floca added a comment to T26142: Property persistence for property relation instance identifing (RII) properties.

Schould be done after T23808: Add Rule base class for DICOM source imagereferences

Mar 5 2019, 3:44 PM · Cleared, MITK (v2021.02)

floca triaged T26142: Property persistence for property relation instance identifing (RII) properties as Normal priority.

Mar 5 2019, 3:43 PM · Cleared, MITK (v2021.02)

kalali added a comment to T23885: ILifecycleAwarePart to notify views if they are visible or not is not working.

I tried it again with the current master using Ubuntu 18.04.
I still have no problems debugging into the mentioned functions.

Mar 5 2019, 3:01 PM · Auto-closed, MITK

kislinsk added a comment to T26094: Classic C++ REST SDK superbuild integration.

If I add cpprestsdk|cpprest to the PACKAGE_DEPENDS of a module, the properties of the cpprestsdk::cpprest target are not respected, i.e. the module is not linked against the library, leading to unresolved symbol linker errors. However, if I do it in plain CMake, it works:

Mar 5 2019, 12:36 AM · MITK

Mar 4 2019

• steint added a comment to T26094: Classic C++ REST SDK superbuild integration.

Sure, here they are:

cpprestsdk-targets.cmake4 KBDownload

Mar 4 2019, 9:06 AM · MITK

kislinsk added a comment to T26094: Classic C++ REST SDK superbuild integration.

Fixed the dependencies to Boost and ZLIB. Changed the handling of zlib. The idea is, that it is not built if there is an easy to find system zlib. However, the decision is now made in the ZLIB script instead of the cpprestsdk script. Must be tested on Linux and macOS again, though.

Mar 4 2019, 8:58 AM · MITK

Mar 1 2019

metzger added a comment to T25409: [MITK Diffusion] Fix tract envelope as DICOM seg.

The crash is caused by the duplicate creation of the layers:

Mar 1 2019, 4:48 PM · MITK

hentsch added a comment to T25682: mitkBaseGeometry.cpp: Internal ITK matrix inversion error, cannot proceed..

had a further look into it:

looked into the matrix vectors. Looks like the first and the second vector is normalized, but the third is not (https://academo.org/demos/3d-vector-plotter/)
tried to transpose the matrix
tried to change the last column by sign
the rectification leads to a normal vector that is the same like the first vector.
we can set the matrix manually to space directions: (1.9,0,0) (0,1.9,0) (0,0,12) (pixel spacing). But that's not a real solution as we usually can't alter the data.

Mar 1 2019, 4:33 PM · MITK

• steint closed T25831: [MITDoc][ImageStatistics] Improve documentation as Resolved by committing rMITK4ca05fd016f4: Improved statistics plugin documentation. Fixes T25831..

Mar 1 2019, 2:44 PM · MITK

• steint added a comment to T25831: [MITDoc][ImageStatistics] Improve documentation.

Pushed new branch T25831-improve-statistics-documentation.

Mar 1 2019, 2:38 PM · MITK

• steint claimed T25831: [MITDoc][ImageStatistics] Improve documentation.

Mar 1 2019, 2:00 PM · MITK

• steint closed T25848: [image statistics plugin] Histogram doesn't reset after deleting image as Resolved.

Seems to be resolved... Can't reproduce it.

Mar 1 2019, 1:48 PM · Restricted Project, MITK

• steint claimed T25848: [image statistics plugin] Histogram doesn't reset after deleting image.

Mar 1 2019, 1:44 PM · Restricted Project, MITK

• steint closed T25850: [image statistics plugin] Deactivate Ignore zero-values voxels on image change as Resolved by committing rMITK6347351dd759: Add reset to default function when switching between images for the histogram….

Mar 1 2019, 1:42 PM · Restricted Project, MITK

• steint closed T25854: [image statistics plugin] Change histogram to default values after image change as Resolved by committing rMITK6347351dd759: Add reset to default function when switching between images for the histogram….

Mar 1 2019, 1:42 PM · Restricted Project, MITK

neher closed T26058: [MITK Diffusion] Gibbs ringing is moving image? as Resolved.

Mar 1 2019, 1:35 PM · MITK

• steint added a comment to T25854: [image statistics plugin] Change histogram to default values after image change.

Pushed new branch T25854-reset-ui-after-image-change.

Mar 1 2019, 1:30 PM · Restricted Project, MITK

kislinsk added a comment to T26094: Classic C++ REST SDK superbuild integration.

Builds now on Linux and macOS. However, the cpprestsdk::cpprest tarket does not link against C++ REST SDK. Have to investigate further. Also, our superbuild does not recognize the dependency to ZLIB.

Mar 1 2019, 1:09 PM · MITK

neher closed T26127: [MITK Diffusion] Display receiver bandwidth correctly as Resolved.

Mar 1 2019, 11:42 AM · MITK

neher added a comment to T26127: [MITK Diffusion] Display receiver bandwidth correctly.

Pushed new branch T26127-Bandwidth.

Mar 1 2019, 11:42 AM · MITK

neher triaged T26127: [MITK Diffusion] Display receiver bandwidth correctly as Normal priority.

Mar 1 2019, 11:26 AM · MITK

• steint claimed T25854: [image statistics plugin] Change histogram to default values after image change.

Mar 1 2019, 11:08 AM · Restricted Project, MITK

• steint claimed T25850: [image statistics plugin] Deactivate Ignore zero-values voxels on image change.

Mar 1 2019, 11:08 AM · Restricted Project, MITK

hentsch closed T25845: Check GUI initialization state as Resolved by committing rMITK9939f5dbf51c: Resolved T25845.

Mar 1 2019, 10:14 AM · Restricted Project, MITK

hentsch added a comment to T25845: Check GUI initialization state.

Pushed new branch T25845-GUIInitializationState.

Mar 1 2019, 10:13 AM · Restricted Project, MITK

kalali updated subscribers of T23972: Image statistics view does not work.

The new image statistics view has been added by @hentsch. It can be opened with the statistics+star icon. It uses QmitkImageStatisticsReloadedView which does not contain any m_visible variable anymore.
@neher Could you recheck your problem?

Mar 1 2019, 9:38 AM · Restricted Project, MITK