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Jun 15 2018

reicht closed T24239: Setup routing to IT infrastructure at DKFZ, a subtask of T24238: [Setup DICOM secure transfers infrastructure], as Resolved.
Jun 15 2018, 7:33 PM · CSI-HD
reicht closed T24240: Setup routing to mobile IT infrastructure at DKFZ and IRVM as Resolved.
Jun 15 2018, 7:32 PM · CSI-HD
reicht closed T24240: Setup routing to mobile IT infrastructure at DKFZ and IRVM, a subtask of T24238: [Setup DICOM secure transfers infrastructure], as Resolved.
Jun 15 2018, 7:32 PM · CSI-HD
reicht closed T24243: Mechanism to check if DICOM connection from external partners works as Resolved.
Jun 15 2018, 6:09 PM · CSI-HD
reicht claimed T24243: Mechanism to check if DICOM connection from external partners works.
Jun 15 2018, 1:09 PM · CSI-HD
reicht moved T24243: Mechanism to check if DICOM connection from external partners works from Doing to Done on the CSI-HD board.

Compiled a DICOM file including information for monitoring purpose. A daily cron-job copies this file into the CTP DICOM data pipeline so end-users can monitor the last successful transfer of this file.

Jun 15 2018, 1:08 PM · CSI-HD
reicht changed the visibility for T24243: Mechanism to check if DICOM connection from external partners works.
Jun 15 2018, 1:01 PM · CSI-HD
reicht moved T24243: Mechanism to check if DICOM connection from external partners works from RM ToDo to Doing on the CSI-HD board.
Jun 15 2018, 1:00 PM · CSI-HD
reicht added a comment to T24237: Move current DICOM Server to VM.

DICOM data is transferred via HTTPS connection.

Jun 15 2018, 12:41 PM · CSI-HD
reicht updated the task description for T24238: [Setup DICOM secure transfers infrastructure].
Jun 15 2018, 12:40 PM · CSI-HD
reicht claimed T24240: Setup routing to mobile IT infrastructure at DKFZ and IRVM.

DICOM data workflow for mobile applications is routed via new DICOM receiver at DKFZ.

Jun 15 2018, 11:25 AM · CSI-HD
reicht claimed T24239: Setup routing to IT infrastructure at DKFZ.

New data receiver for DICOM images at DKFZ is online and ready to go :-).

Jun 15 2018, 11:22 AM · CSI-HD

May 27 2018

reicht created T24841: Extend initial questionnaire .
May 27 2018, 2:20 PM · CSI-HD

Apr 18 2018

reicht added a comment to T24589: Perform Trial Survey.

Survey is ready but DKFZ IT-CF needs to port the survey to the public server. Currently the survey can only be accessed within the DKFZ network.

Apr 18 2018, 10:26 PM · CSI-HD
reicht updated the task description for T24589: Perform Trial Survey.
Apr 18 2018, 10:23 PM · CSI-HD

Apr 13 2018

reicht claimed T24589: Perform Trial Survey.
Apr 13 2018, 9:48 PM · CSI-HD

Apr 12 2018

kislinsk added a comment to T23249: Ensure openSSL availability for MITK installers using XNAT plugin or other REST services.

A better address for the DKFZ proxy is www-int2:3128.

Apr 12 2018, 11:49 PM · Restricted Project, CSI-HD, MITK
steint added a comment to T23249: Ensure openSSL availability for MITK installers using XNAT plugin or other REST services.

After checking the mentioned CMake variables the error remains.
If you still have trouble on windows with getting a connection, the error can occur if your IP is not public. Then you need to use the proxy configuration:

Apr 12 2018, 2:43 PM · Restricted Project, CSI-HD, MITK
goch added a comment to T23249: Ensure openSSL availability for MITK installers using XNAT plugin or other REST services.

The default way on windows is to install openSSL and point the installer to the corresponding libraries. I do not really see it as a superbuild option, as it is a non-issue on *nix systems usually, due to omnipresent openSSL.

Apr 12 2018, 10:27 AM · Restricted Project, CSI-HD, MITK

Apr 11 2018

kalali updated subscribers of T23249: Ensure openSSL availability for MITK installers using XNAT plugin or other REST services.

@steint: You could use this task for further clarification / questions concerning the openSSL problem.

Apr 11 2018, 4:58 PM · Restricted Project, CSI-HD, MITK

Apr 8 2018

reicht updated the task description for T24589: Perform Trial Survey.
Apr 8 2018, 12:00 AM · CSI-HD

Apr 7 2018

reicht added a parent task for T24589: Perform Trial Survey: Unknown Object (Maniphest Task).
Apr 7 2018, 11:58 PM · CSI-HD
reicht created T24589: Perform Trial Survey.
Apr 7 2018, 11:58 PM · CSI-HD

Feb 12 2018

reicht created T24243: Mechanism to check if DICOM connection from external partners works.
Feb 12 2018, 2:54 PM · CSI-HD
reicht claimed T24238: [Setup DICOM secure transfers infrastructure].

Routing rules are set-up.

Feb 12 2018, 1:49 PM · CSI-HD
reicht changed the visibility for T24240: Setup routing to mobile IT infrastructure at DKFZ and IRVM.
Feb 12 2018, 1:48 PM · CSI-HD
reicht changed the visibility for T24239: Setup routing to IT infrastructure at DKFZ.
Feb 12 2018, 1:48 PM · CSI-HD
reicht changed the visibility for T24238: [Setup DICOM secure transfers infrastructure].
Feb 12 2018, 1:47 PM · CSI-HD
reicht claimed T24237: Move current DICOM Server to VM.
Feb 12 2018, 1:46 PM · CSI-HD
reicht moved T24238: [Setup DICOM secure transfers infrastructure] from RM ToDo to Doing on the CSI-HD board.
Feb 12 2018, 1:46 PM · CSI-HD
reicht moved T24240: Setup routing to mobile IT infrastructure at DKFZ and IRVM from RM ToDo to Doing on the CSI-HD board.
Feb 12 2018, 1:45 PM · CSI-HD
reicht moved T24239: Setup routing to IT infrastructure at DKFZ from RM ToDo to Doing on the CSI-HD board.
Feb 12 2018, 1:45 PM · CSI-HD
reicht renamed T24240: Setup routing to mobile IT infrastructure at DKFZ and IRVM from Setup routing to XNAT to Setup routing to mobile IT infrastructure at DKFZ and IRVM.
Feb 12 2018, 1:03 PM · CSI-HD
reicht renamed T24239: Setup routing to IT infrastructure at DKFZ from Setup routing to sFTP to Setup routing to IT infrastructure at DKFZ.
Feb 12 2018, 1:01 PM · CSI-HD
reicht triaged T24240: Setup routing to mobile IT infrastructure at DKFZ and IRVM as Normal priority.
Feb 12 2018, 12:57 PM · CSI-HD
reicht triaged T24239: Setup routing to IT infrastructure at DKFZ as Normal priority.
Feb 12 2018, 12:56 PM · CSI-HD
reicht created T24238: [Setup DICOM secure transfers infrastructure].
Feb 12 2018, 12:55 PM · CSI-HD
reicht moved T24237: Move current DICOM Server to VM from RM ToDo to Done on the CSI-HD board.
Feb 12 2018, 12:48 PM · CSI-HD
reicht added a comment to T24237: Move current DICOM Server to VM.

VM is installed and available. After first tests, the VM will be moved into the Demilitarised Zone (DMZ) within the DKFZ IT Infrastructure.

Feb 12 2018, 12:48 PM · CSI-HD
reicht changed the visibility for T24237: Move current DICOM Server to VM.
Feb 12 2018, 12:45 PM · CSI-HD
reicht created T24237: Move current DICOM Server to VM.
Feb 12 2018, 12:44 PM · CSI-HD

Nov 8 2017

reicht moved T23433: Anonymise sensitive burnt-in information in pixeldata from Doing to Done on the CSI-HD board.
Nov 8 2017, 3:22 PM · CSI-HD

Nov 6 2017

reicht added a comment to T23433: Anonymise sensitive burnt-in information in pixeldata.

Enabled CTP DICOM-PIXEL-ANONYMISER Processor and updated script according to CT Scanners parameters. All further DICOM pixeldata will be anonymised accordingly

Nov 6 2017, 4:53 PM · CSI-HD
reicht moved T23433: Anonymise sensitive burnt-in information in pixeldata from ANA ToDo to Doing on the CSI-HD board.
Nov 6 2017, 2:49 PM · CSI-HD
reicht moved T23433: Anonymise sensitive burnt-in information in pixeldata from DKFZ ToDo to ANA ToDo on the CSI-HD board.
Nov 6 2017, 2:08 PM · CSI-HD

Sep 26 2017

reicht moved T23433: Anonymise sensitive burnt-in information in pixeldata from RM ToDo to DKFZ ToDo on the CSI-HD board.
Sep 26 2017, 1:01 PM · CSI-HD
reicht created T23433: Anonymise sensitive burnt-in information in pixeldata.
Sep 26 2017, 1:01 PM · CSI-HD

Sep 13 2017

reicht moved T23244: Xnat plugin: easy to use nrrd upload after DICOM import from Doing to DKFZ ToDo on the CSI-HD board.
Sep 13 2017, 2:58 PM · CSI-HD, MITK

Sep 2 2017

reicht added a comment to T23244: Xnat plugin: easy to use nrrd upload after DICOM import.

Also on macOS same issue occurs using a localizer sequence. This is shown in the log:

Sep 2 2017, 12:00 AM · CSI-HD, MITK

Sep 1 2017

reicht added a comment to T23244: Xnat plugin: easy to use nrrd upload after DICOM import.
Tested this commit rMITK2d98a91f27b0 on Win10
Sep 1 2017, 1:57 PM · CSI-HD, MITK

Aug 30 2017

reicht added a comment to T23244: Xnat plugin: easy to use nrrd upload after DICOM import.

Pushed new branch T23244-XNAT-nrrd-convenient-upload-feature.

Aug 30 2017, 11:52 PM · CSI-HD, MITK

Aug 24 2017

reicht added a parent task for T23240: Xnat plugin: refresh treebrowser when file has been uploaded: T23301: XNAT improvements.
Aug 24 2017, 6:34 PM · Auto-closed, CSI-HD, MITK
reicht added a parent task for T23241: Xnat plugin: refresh treebrowser when new folder is created: T23301: XNAT improvements.
Aug 24 2017, 6:34 PM · Auto-closed, CSI-HD, MITK
reicht added a parent task for T23243: Xnat plugin: Fix upload status message: T23301: XNAT improvements.
Aug 24 2017, 6:34 PM · Auto-closed, CSI-HD, MITK
reicht added a parent task for T23242: Xnat plugin: Drag and Drop feature between Xnat plugin and Datamanager: T23301: XNAT improvements.
Aug 24 2017, 6:34 PM · Auto-closed, CSI-HD, MITK
reicht added a parent task for T23244: Xnat plugin: easy to use nrrd upload after DICOM import: T23301: XNAT improvements.
Aug 24 2017, 6:34 PM · CSI-HD, MITK
reicht added a parent task for T23249: Ensure openSSL availability for MITK installers using XNAT plugin or other REST services: T23301: XNAT improvements.
Aug 24 2017, 6:34 PM · Restricted Project, CSI-HD, MITK
reicht added a comment to T23243: Xnat plugin: Fix upload status message.

seems like this only occurs when using the upload context menu in Datamanager. When using upload button I could not recall this issue.

Aug 24 2017, 6:16 PM · Auto-closed, CSI-HD, MITK
reicht added a comment to T23244: Xnat plugin: easy to use nrrd upload after DICOM import.

On windows steps 2 and 3 are still needed because an error is thrown otherwise. Please note, that this was tested on DIPP2017029000. My tests on OSX were performed on a newer MITK master branch.

Aug 24 2017, 6:14 PM · CSI-HD, MITK
reicht moved T23244: Xnat plugin: easy to use nrrd upload after DICOM import from Done to Doing on the CSI-HD board.
Aug 24 2017, 6:13 PM · CSI-HD, MITK
reicht moved T23058: Structure latest notes from last meeting from Doing to Done on the CSI-HD board.
Aug 24 2017, 6:12 PM · CSI-HD

Aug 19 2017

reicht moved T23244: Xnat plugin: easy to use nrrd upload after DICOM import from Doing to Done on the CSI-HD board.
Aug 19 2017, 9:04 PM · CSI-HD, MITK
reicht moved T23058: Structure latest notes from last meeting from Done to Doing on the CSI-HD board.
Aug 19 2017, 9:04 PM · CSI-HD
reicht moved T23058: Structure latest notes from last meeting from Doing to Done on the CSI-HD board.
Aug 19 2017, 9:03 PM · CSI-HD

Aug 15 2017

reicht moved T23109: Implement Datapipeline to access forensic-rad. images via XNAT (external partners) from Doing to Done on the CSI-HD board.

Tested proof of concept of this task while working on this task T23244: Xnat plugin: easy to use nrrd upload after DICOM import.

Aug 15 2017, 11:52 PM · CSI-HD
reicht claimed T23244: Xnat plugin: easy to use nrrd upload after DICOM import.
Aug 15 2017, 11:47 PM · CSI-HD, MITK
reicht moved T23244: Xnat plugin: easy to use nrrd upload after DICOM import from DKFZ ToDo to Doing on the CSI-HD board.
Aug 15 2017, 11:47 PM · CSI-HD, MITK
reicht added a comment to T23244: Xnat plugin: easy to use nrrd upload after DICOM import.

Step 2 and 3 can already be skipped. Tested on OSX using latest MITK master build. Need to verify on Windows and with a collaborating radiologist.

Aug 15 2017, 11:34 PM · CSI-HD, MITK

Aug 14 2017

reicht moved T23249: Ensure openSSL availability for MITK installers using XNAT plugin or other REST services from RM ToDo to DKFZ ToDo on the CSI-HD board.
Aug 14 2017, 6:17 PM · Restricted Project, CSI-HD, MITK
reicht created T23249: Ensure openSSL availability for MITK installers using XNAT plugin or other REST services.
Aug 14 2017, 6:16 PM · Restricted Project, CSI-HD, MITK

Aug 11 2017

reicht moved T23243: Xnat plugin: Fix upload status message from RM ToDo to DKFZ ToDo on the CSI-HD board.
Aug 11 2017, 6:08 PM · Auto-closed, CSI-HD, MITK
reicht moved T23244: Xnat plugin: easy to use nrrd upload after DICOM import from RM ToDo to DKFZ ToDo on the CSI-HD board.
Aug 11 2017, 6:08 PM · CSI-HD, MITK
reicht created T23244: Xnat plugin: easy to use nrrd upload after DICOM import.
Aug 11 2017, 6:08 PM · CSI-HD, MITK
reicht created T23243: Xnat plugin: Fix upload status message.
Aug 11 2017, 6:00 PM · Auto-closed, CSI-HD, MITK
reicht moved T23240: Xnat plugin: refresh treebrowser when file has been uploaded from RM ToDo to DKFZ ToDo on the CSI-HD board.
Aug 11 2017, 5:58 PM · Auto-closed, CSI-HD, MITK
reicht moved T23241: Xnat plugin: refresh treebrowser when new folder is created from RM ToDo to DKFZ ToDo on the CSI-HD board.
Aug 11 2017, 5:58 PM · Auto-closed, CSI-HD, MITK
reicht moved T23242: Xnat plugin: Drag and Drop feature between Xnat plugin and Datamanager from RM ToDo to DKFZ ToDo on the CSI-HD board.
Aug 11 2017, 5:58 PM · Auto-closed, CSI-HD, MITK
reicht added a project to T23241: Xnat plugin: refresh treebrowser when new folder is created: CSI-HD.
Aug 11 2017, 5:58 PM · Auto-closed, CSI-HD, MITK
reicht created T23242: Xnat plugin: Drag and Drop feature between Xnat plugin and Datamanager.
Aug 11 2017, 5:57 PM · Auto-closed, CSI-HD, MITK
reicht created T23240: Xnat plugin: refresh treebrowser when file has been uploaded.
Aug 11 2017, 5:52 PM · Auto-closed, CSI-HD, MITK

Aug 9 2017

reicht updated the task description for T23207: Digital data formats for long term storage.
Aug 9 2017, 5:23 PM · CSI-HD
reicht updated the task description for T23207: Digital data formats for long term storage.
Aug 9 2017, 5:22 PM · CSI-HD
reicht moved T23207: Digital data formats for long term storage from RM ToDo to DKFZ ToDo on the CSI-HD board.
Aug 9 2017, 5:21 PM · CSI-HD
reicht renamed T23207: Digital data formats for long term storage from Digital data format for long term storage to Digital data formats for long term storage.
Aug 9 2017, 5:03 PM · CSI-HD
reicht created T23207: Digital data formats for long term storage.
Aug 9 2017, 5:02 PM · CSI-HD

Aug 3 2017

reicht updated the task description for T23140: Test XNAT-archive access through Proxy.
Aug 3 2017, 5:58 PM · CSI-HD
reicht added a comment to T23140: Test XNAT-archive access through Proxy.

Access and Login to XNAT via Webbrowser works
Viewing images on and downloading images from XNAT-Webportal did not work and caused a Java error (Exception that some JavaClass is missing although java is properly installed). Therefore the Webportal is of low interest.

  • Installation of DIPP will work only on new PCs with 64 Bit Operating system (ev. use Notebook)
  • Test MITK-XNAT plugin on site (contact Mr. Falk Gauss, IT Admin at Forensics Dept.)
Aug 3 2017, 5:45 PM · CSI-HD
reicht added a member for CSI-HD: yenk.
Aug 3 2017, 2:48 PM
reicht added a comment to T23140: Test XNAT-archive access through Proxy.

resolving the address:

Aug 3 2017, 11:23 AM · CSI-HD
nolden updated subscribers of T23140: Test XNAT-archive access through Proxy.

@reicht do you need support? Additional testcases? cc'ing @metzger @thomass

Aug 3 2017, 9:35 AM · CSI-HD

Aug 2 2017

reicht updated subscribers of T23140: Test XNAT-archive access through Proxy.

@nolden, tomorrow I will meet with Prof. Yen at forensics institute. If there is time left, XNAT-access via Webbrowser and MITK (DIPP with XNAT Plugin) testing can be performed.

Aug 2 2017, 7:14 PM · CSI-HD
reicht updated subscribers of T23109: Implement Datapipeline to access forensic-rad. images via XNAT (external partners).

A routine post-mortem CT scan successfully sent from Anatomy CT-scanner via CSI-HD datapipelines to XNAT (internet accessible XNAT) csi-hd project. Might be of interest for @thomass @nolden

Aug 2 2017, 7:09 PM · CSI-HD
reicht added a member for CSI-HD: thomass.
Aug 2 2017, 7:07 PM
reicht added a member for CSI-HD: nolden.
Aug 2 2017, 7:06 PM
reicht claimed T23109: Implement Datapipeline to access forensic-rad. images via XNAT (external partners).
Aug 2 2017, 6:33 PM · CSI-HD
reicht changed the visibility for T23140: Test XNAT-archive access through Proxy.
Aug 2 2017, 9:49 AM · CSI-HD
reicht renamed T23140: Test XNAT-archive access through Proxy from Test XNAT archive access through Proxy to Test XNAT-archive access through Proxy.
Aug 2 2017, 9:49 AM · CSI-HD
reicht created T23140: Test XNAT-archive access through Proxy.
Aug 2 2017, 9:48 AM · CSI-HD

Jul 19 2017

reicht moved T23058: Structure latest notes from last meeting from RM ToDo to Doing on the CSI-HD board.
Jul 19 2017, 5:27 PM · CSI-HD
reicht moved T23109: Implement Datapipeline to access forensic-rad. images via XNAT (external partners) from RM ToDo to DKFZ ToDo on the CSI-HD board.
Jul 19 2017, 5:26 PM · CSI-HD