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Dec 13 2018

kalali added a comment to T25762: Distinguish between checkbox visibility and selection visibility.

Pushed new branch T25762-Fix-checkbox-visibility-in-datamanager.

Dec 13 2018, 6:57 PM · MITK
• tsvetkov committed rMITK61bed468f526: modified: Plugins/PluginList.cmake modified: Plugins/org.mitk. (authored by • tsvetkov).
modified: Plugins/PluginList.cmake modified: Plugins/org.mitk.
Dec 13 2018, 3:37 PM
kislinsk claimed T25746: Multilabel segementation tools only available in the 0th time step.
Dec 13 2018, 3:15 PM · MITK (2018-04-2)
kislinsk added a comment to T25746: Multilabel segementation tools only available in the 0th time step.
Dec 13 2018, 2:50 PM · MITK (2018-04-2)
kislinsk committed rMITKbd86390d4ffb: Fix confirmation of segmentations in time steps other than 0 (authored by kislinsk).
Fix confirmation of segmentations in time steps other than 0
Dec 13 2018, 2:49 PM
kislinsk committed rMITK1be80eec9d12: Call correct overload of FillContourInSlice (authored by kislinsk).
Call correct overload of FillContourInSlice
Dec 13 2018, 2:49 PM
kislinsk committed rMITK7e3c4ce49cdc: Fix 4-d capabilities of ContourModelUtils (authored by kislinsk).
Fix 4-d capabilities of ContourModelUtils
Dec 13 2018, 2:49 PM
kalali claimed T25483: Apply level window to multiple selected images.

Currently the level window slider is not designed to affect multiple nodes.
The level window manager holds a member m_CurrentImage that denotes the current image on which the level window should work. Need to investigate a little further what will happen if we use a set / list of current images.

Dec 13 2018, 2:41 PM · Noteworthy, Restricted Project, MITK
kalali added a comment to T25483: Apply level window to multiple selected images.

I suggest to set the AutoTopmost mode to off as default.

Dec 13 2018, 2:39 PM · Noteworthy, Restricted Project, MITK
kislinsk committed rMITKfb65f98ed82b: Fix FillContourInSlice() for other time steps than 0 (authored by kislinsk).
Fix FillContourInSlice() for other time steps than 0
Dec 13 2018, 2:11 PM
kislinsk added a comment to T25746: Multilabel segementation tools only available in the 0th time step.
Dec 13 2018, 2:11 PM · MITK (2018-04-2)
kislinsk added a comment to T25746: Multilabel segementation tools only available in the 0th time step.
Dec 13 2018, 1:43 PM · MITK (2018-04-2)
reicht added a member for SIDT: • d485r.
Dec 13 2018, 1:02 PM
reicht added a member for CSI-HD: • d485r.
Dec 13 2018, 1:02 PM
kislinsk closed T25756: Classic segmentation live wire tool crashes when changing image slice while creating contours as Resolved.

The LiveWire tool stores a reference to a PlaneGeometry as raw pointer. Of course this doesn't go well for long and the pointer is invalid when scrolling through the image slices while drawing a contour. I replaced the raw pointer by a smart pointer. I also cleaned up the code.

Dec 13 2018, 12:54 PM · Restricted Project, MITK (2018-04-2)
kislinsk committed rMITK53de8984b1ab: Merge branch 'T25756-FixCrashInLiveWireTool' into releases/2018-04 (authored by kislinsk).
Merge branch 'T25756-FixCrashInLiveWireTool' into releases/2018-04
Dec 13 2018, 12:51 PM
kislinsk committed rMITK4382c6751408: Fix crash caused by invalid raw pointer (authored by kislinsk).
Fix crash caused by invalid raw pointer
Dec 13 2018, 12:50 PM
kislinsk committed rMITK4812a61f3946: Clean up LiveWire tool code (authored by kislinsk).
Clean up LiveWire tool code
Dec 13 2018, 12:35 PM
kislinsk added a comment to T25756: Classic segmentation live wire tool crashes when changing image slice while creating contours.

Pushed new branch T25756-FixCrashInLiveWireTool.

Dec 13 2018, 12:35 PM · Restricted Project, MITK (2018-04-2)
kalali triaged T25762: Distinguish between checkbox visibility and selection visibility as Normal priority.
Dec 13 2018, 11:27 AM · MITK
kalali updated the task description for T25483: Apply level window to multiple selected images.
Dec 13 2018, 10:38 AM · Noteworthy, Restricted Project, MITK
kalali added a comment to T25483: Apply level window to multiple selected images.

Has been proposed before in T18200

Dec 13 2018, 10:32 AM · Noteworthy, Restricted Project, MITK
full updated the task description for T25759: MITK crashes when right clicking on missing segmentation label list in multilabel view.
Dec 13 2018, 9:50 AM · MITK (2018-04-2)
kislinsk moved T25756: Classic segmentation live wire tool crashes when changing image slice while creating contours from Restricted Project Column to Restricted Project Column on the Restricted Project board.
Dec 13 2018, 9:07 AM · Restricted Project, MITK (2018-04-2)
kislinsk triaged T25760: MITK crashes when deleting files from Data Manager as High priority.
Dec 13 2018, 9:02 AM · MITK
kislinsk triaged T25759: MITK crashes when right clicking on missing segmentation label list in multilabel view as High priority.
Dec 13 2018, 9:01 AM · MITK (2018-04-2)
full created T25760: MITK crashes when deleting files from Data Manager.
Dec 13 2018, 9:00 AM · MITK
full created T25759: MITK crashes when right clicking on missing segmentation label list in multilabel view.
Dec 13 2018, 8:44 AM · MITK (2018-04-2)

Dec 12 2018

floca committed rMITKe4d3f3e92ff7: Use parentheses around && in || (authored by kislinsk).
Use parentheses around && in ||
Dec 12 2018, 10:24 PM
floca added a comment to T25757: Fix GCC compiler error in Model Fit Inspector.

Sorry and thanks! Slipped my inspection.

Dec 12 2018, 10:20 PM · MITK
kislinsk closed T25757: Fix GCC compiler error in Model Fit Inspector as Resolved.
Dec 12 2018, 10:13 PM · MITK
kislinsk committed rMITKc788036a0944: Merge branch 'T25757-FixModelFitInspector' (authored by kislinsk).
Merge branch 'T25757-FixModelFitInspector'
Dec 12 2018, 10:13 PM
kislinsk committed rMITK09087bd57716: Use parentheses around && in || (authored by kislinsk).
Use parentheses around && in ||
Dec 12 2018, 10:12 PM
kislinsk added a comment to T25757: Fix GCC compiler error in Model Fit Inspector.

Pushed new branch T25757-FixModelFitInspector.

Dec 12 2018, 10:12 PM · MITK
kislinsk triaged T25757: Fix GCC compiler error in Model Fit Inspector as Normal priority.
Dec 12 2018, 10:11 PM · MITK
kislinsk committed rMITK9497700ee6f6: Merge branch 'T25727-Improve_PlanarFigureMapper2D_Performance' (authored by kislinsk).
Merge branch 'T25727-Improve_PlanarFigureMapper2D_Performance'
Dec 12 2018, 10:05 PM
kislinsk committed rMITK210592b946f5: Remove unused variables (authored by kislinsk).
Remove unused variables
Dec 12 2018, 10:05 PM
kislinsk added a comment to T25727: Improve Rendering performance of planar figures.

Oops, turns out, the variables are not even in use...

Dec 12 2018, 10:02 PM · MITK
floca committed rMITK59cca138dd15: Patched/Quick fixed welcom info for eMITK (authored by floca).
Patched/Quick fixed welcom info for eMITK
Dec 12 2018, 6:42 PM
floca committed rMITK445872dbec03: added multi lable seg (authored by floca).
added multi lable seg
Dec 12 2018, 6:42 PM
kislinsk closed T25727: Improve Rendering performance of planar figures as Resolved.

Fixed with std::array and also fixed a memory leak.

Dec 12 2018, 4:18 PM · MITK
kislinsk committed rMITK2d49df74e282: Merge branch 'T25727-Improve_PlanarFigureMapper2D_Performance' (authored by kislinsk).
Merge branch 'T25727-Improve_PlanarFigureMapper2D_Performance'
Dec 12 2018, 4:17 PM
kislinsk committed rMITKc6f127d6437b: Use stack instead of heap for temporary arrays (authored by kislinsk).
Use stack instead of heap for temporary arrays
Dec 12 2018, 4:16 PM
kislinsk added a comment to T25727: Improve Rendering performance of planar figures.

Pushed new branch T25727-Improve_PlanarFigureMapper2D_Performance.

Dec 12 2018, 4:16 PM · MITK
kalali added a comment to T25750: 100% Opacity of segmentation maps after restart of multilabel segmentation tool.

I can reproduce your bug.
However, when using the latest master the problem is solved. I changed the context menu (and decoupled it from the data manager) and now everything works fine. This fix was done after the release.
However, one could discuss if reopening the multilabel segmentation plugin should actually reset the opacity to 100% or leave it as it is.

Dec 12 2018, 4:10 PM · MITK (2018-04-2)
kalali added a project to T25056: Refactor data manager context menu: Noteworthy.
Dec 12 2018, 4:05 PM · MITK (v2024.06), Noteworthy
floca committed rMITK07f70c69fcc9: Merge branch 'T25752-ModelFitInspector_optimization' (authored by floca).
Merge branch 'T25752-ModelFitInspector_optimization'
Dec 12 2018, 4:03 PM
kislinsk triaged T25727: Improve Rendering performance of planar figures as Low priority.
Dec 12 2018, 3:52 PM · MITK
kislinsk claimed T25727: Improve Rendering performance of planar figures.

Thanks for reporting, I'll have a look at this. Do you need the fix to be backported to the 2018.04 release or is a fix in the master branch sufficient?

Dec 12 2018, 3:52 PM · MITK
kislinsk triaged T25756: Classic segmentation live wire tool crashes when changing image slice while creating contours as Normal priority.
Dec 12 2018, 3:48 PM · Restricted Project, MITK (2018-04-2)
floca committed rMITK41a6356f58cc: Fixed T25752 (authored by floca).
Fixed T25752
Dec 12 2018, 3:45 PM
floca committed rMITKde2bfd3aecfb: Fixed T25751 (authored by floca).
Fixed T25751
Dec 12 2018, 3:45 PM
kislinsk triaged T25750: 100% Opacity of segmentation maps after restart of multilabel segmentation tool as Normal priority.
Dec 12 2018, 3:43 PM · MITK (2018-04-2)
kislinsk triaged T25743: ImageStatisticsCalculator bug: 4D image + planarFigure lead to same results for each timestep as High priority.
Dec 12 2018, 3:42 PM · MITK
kislinsk triaged T25754: Cannot use tools in multilabel segmentation view without restart as Low priority.
Dec 12 2018, 3:41 PM · Missing Info, MITK
kislinsk closed T25755: MultiSetImageTest fails with new DICOM SEG features as Resolved.
Dec 12 2018, 3:40 PM · MITK
kislinsk committed rMITKd6939a06b120: Merge branch 'T25755-MultiSetImageTestFails' (authored by kislinsk).
Merge branch 'T25755-MultiSetImageTestFails'
Dec 12 2018, 3:40 PM
kislinsk committed rMITK85539840f356: Initialize DICOM related properties in Label constructor (authored by kislinsk).
Initialize DICOM related properties in Label constructor
Dec 12 2018, 3:39 PM
kislinsk committed rMITK62d5a57ea862: Fix static initialization (authored by kislinsk).
Fix static initialization
Dec 12 2018, 3:39 PM
kislinsk added a comment to T25755: MultiSetImageTest fails with new DICOM SEG features.

Pushed new branch T25755-MultiSetImageTestFails.

Dec 12 2018, 3:38 PM · MITK
kislinsk triaged T25755: MultiSetImageTest fails with new DICOM SEG features as Normal priority.
Dec 12 2018, 3:34 PM · MITK
full updated the task description for T25754: Cannot use tools in multilabel segmentation view without restart.
Dec 12 2018, 3:25 PM · Missing Info, MITK
full updated the task description for T25754: Cannot use tools in multilabel segmentation view without restart.
Dec 12 2018, 3:25 PM · Missing Info, MITK
full created T25754: Cannot use tools in multilabel segmentation view without restart.
Dec 12 2018, 3:17 PM · Missing Info, MITK
kalali renamed T25753: Some refactoring of the selection classes from Some refactoring to Some refactoring of the selection classes.
Dec 12 2018, 3:16 PM · MITK
kalali committed rMITK5ac58b039049: Fix comments, refactor, clean code (authored by kalali).
Fix comments, refactor, clean code
Dec 12 2018, 3:08 PM
kalali added a comment to T25753: Some refactoring of the selection classes.

Pushed new branch T25753-Refactor-selection-concept-classes.

Dec 12 2018, 3:08 PM · MITK
floca committed rMITKc2f89da46392: Fixed T25752 (authored by floca).
Fixed T25752
Dec 12 2018, 3:08 PM
floca committed rMITKbd0aee1a2509: Fixed T25751 (authored by floca).
Fixed T25751
Dec 12 2018, 3:07 PM
kalali triaged T25753: Some refactoring of the selection classes as Normal priority.
Dec 12 2018, 3:04 PM · MITK
kalali updated the task description for T24771: [MITKDoc] Add a concept documentation for the data storage inspectors and the overhaul of the selection concept.
Dec 12 2018, 2:46 PM · MITK (v2021.02)
full updated the task description for T25747: Things I came across when correcting fully automatic segmentations.
Dec 12 2018, 2:17 PM · MITK
full created T25750: 100% Opacity of segmentation maps after restart of multilabel segmentation tool.
Dec 12 2018, 2:06 PM · MITK (2018-04-2)
hentsch added a comment to T25716: ImageStatisticsCalculatorTests run through, but are failed.

also appears on current master: http://cdash.mitk.org/testDetails.php?test=13168686&build=682712

Dec 12 2018, 2:03 PM · MITK
hentsch updated the task description for T25740: MitkImageStatisticsCalculatorTests fail.
Dec 12 2018, 1:31 PM · MITK
mittmann closed T25653: USDevice cannot be edited/removed when its video source is an OIGTL Client as Resolved.
Dec 12 2018, 1:26 PM · Restricted Project, MITK, IGT
mittmann closed T25654: Using an OIGTL Client as video source of the USDevice results in a crash when trying to calibrate CombinedModality as Resolved.
Dec 12 2018, 1:26 PM · Restricted Project, MITK, IGT
mittmann closed T25733: Add USIGTLDevice XML persistence as Resolved.
Dec 12 2018, 1:25 PM · MITK, IGT
mittmann committed rMITK307572915732: Merge branch 'T24287-USCalibrationViewNotUpdatedWhenUsingTrackedUS' into T25522… (authored by mittmann).
Merge branch 'T24287-USCalibrationViewNotUpdatedWhenUsingTrackedUS' into T25522…
Dec 12 2018, 12:11 PM
mittmann committed rMITK57f4797f6ffa: Call Update within GenerateData() method for updating the USCalibrationView… (authored by mittmann).
Call Update within GenerateData() method for updating the USCalibrationView…
Dec 12 2018, 12:09 PM
mittmann added a comment to T24287: Support of tracked Ultrasound.

Pushed new branch T24287-USCalibrationViewNotUpdatedWhenUsingTrackedUS.

Dec 12 2018, 12:09 PM · Restricted Project, MITK, IGT
neher added a comment to T25424: Since cmake 3.12 FindPythonLibs is deprecated.

If python3 is NOT found, the executable cannot be specified manually since the corresponding cache variable seems to be deleted every time find_package(Python3) is called. Cmake bug?

Dec 12 2018, 11:55 AM · MITK
neher closed T25744: [MITK Diffusion] update tractseg in MITK to version 1.8 as Resolved.
Dec 12 2018, 11:37 AM · MITK
neher committed rMITKdc9ce43c46dd: Merge branch 'T25744-TractsegUpdate' (authored by neher).
Merge branch 'T25744-TractsegUpdate'
Dec 12 2018, 11:26 AM
neher committed rMITK720e1f3d1677: Updated tractseg (authored by neher).
Updated tractseg
Dec 12 2018, 11:25 AM
neher added a comment to T25744: [MITK Diffusion] update tractseg in MITK to version 1.8.

Pushed new branch T25744-TractsegUpdate.

Dec 12 2018, 11:25 AM · MITK
neher closed T25420: Add openmp external project to reenable openmp for apple clang as Resolved.
Dec 12 2018, 10:52 AM · MITK
kislinsk placed T25746: Multilabel segementation tools only available in the 0th time step up for grabs.
Dec 12 2018, 10:32 AM · MITK (2018-04-2)
kislinsk edited projects for T25746: Multilabel segementation tools only available in the 0th time step, added: MITK (2018-04-2); removed MITK.
Dec 12 2018, 10:26 AM · MITK (2018-04-2)
kislinsk triaged T25747: Things I came across when correcting fully automatic segmentations as Wishlist priority.
Dec 12 2018, 10:25 AM · MITK
kislinsk lowered the priority of T25748: Backported fixes (basically cherry-picked from master branch) from Normal to Wishlist.
Dec 12 2018, 10:24 AM · MITK (2018-04-2)
kislinsk moved T25748: Backported fixes (basically cherry-picked from master branch) from Backlog to Release Management on the MITK (2018-04-2) board.
Dec 12 2018, 10:21 AM · MITK (2018-04-2)
kislinsk triaged T25748: Backported fixes (basically cherry-picked from master branch) as Normal priority.
Dec 12 2018, 10:20 AM · MITK (2018-04-2)
kislinsk created MITK (2018-04-2).
Dec 12 2018, 10:12 AM
neher committed rMITK89b5d9fb8e17: finding python3 is required (authored by neher).
finding python3 is required
Dec 12 2018, 10:05 AM
full updated the task description for T25747: Things I came across when correcting fully automatic segmentations.
Dec 12 2018, 9:49 AM · MITK
full created T25747: Things I came across when correcting fully automatic segmentations.
Dec 12 2018, 9:49 AM · MITK
neher committed rMITK6cb2c4b8622f: Passing python 3 executable to swig (authored by neher).
Passing python 3 executable to swig
Dec 12 2018, 9:11 AM
full triaged T25746: Multilabel segementation tools only available in the 0th time step as High priority.
Dec 12 2018, 9:06 AM · MITK (2018-04-2)

Dec 11 2018

nolden claimed T25745: Integrate new DICOM browser widget from CTK.
Dec 11 2018, 11:59 PM · MITK
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