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Apr 9 2024

a178n added a comment to T30268: [Checklist] Segmentation 3D Interpolation.

After testing:

  1. Contours are still in red. Not black.❌ -> Checklist updated should suffice.
  2. Interpolation is updated immediately. No need to reinit anymore. ✔
  3. Interpolation is updated immediately. No need to reinit anymore. ✔
  4. Dropdown is still in 3-Dimensional, not on Disabled. ❌ -> Checklist updated could suffice as fix.
  5. There is no contour. Dropdown on "Disabled" ❌
Apr 9 2024, 12:25 PM · Moved to git.dkfz.de, MITK (v2024.12), Checklist
a178n added a comment to T30353: [TotalSeg] Add confirmation dialog before exiting the tool .

Pushed new branch to rMITK MITK: feature/T30353-tool-confirm-exit.

Apr 9 2024, 10:58 AM · MITK (v2024.06)
floca added a comment to T30391: [Segmentation] Python 3.12 support for installable AI tools.

How important/much work is that support? Might be things that are more pressing then that? Or?

Apr 9 2024, 6:45 AM · MITK (v2024.06)

Apr 8 2024

a178n added a revision to T30391: [Segmentation] Python 3.12 support for installable AI tools: Unknown Object (Differential Revision).
Apr 8 2024, 10:30 AM · MITK (v2024.06)
a178n closed T30300: Remember "Fast" checkbox setting, a subtask of T29437: [SEG] Add TotalSegmentator, as Resolved.
Apr 8 2024, 10:17 AM · MITK
a178n closed T30300: Remember "Fast" checkbox setting as Resolved.
Apr 8 2024, 10:17 AM · MITK (v2024.06)
a178n added a revision to T30300: Remember "Fast" checkbox setting: Unknown Object (Differential Revision).
Apr 8 2024, 10:17 AM · MITK (v2024.06)
a178n added a revision to T30353: [TotalSeg] Add confirmation dialog before exiting the tool : Unknown Object (Differential Revision).
Apr 8 2024, 10:16 AM · MITK (v2024.06)
a178n committed rMITKad1f95a6d4e1: Totalseg UI fast checkbox setting will be cached (authored by a178n).
Totalseg UI fast checkbox setting will be cached
Apr 8 2024, 10:07 AM
a178n committed rMITK90cc186e494d: Persistent Totalseg UI fast checkbox setting (authored by a178n).
Persistent Totalseg UI fast checkbox setting
Apr 8 2024, 10:07 AM
a178n updated the task description for T30392: [Segmentation] Totalsegmentator & Otsu is buggy.
Apr 8 2024, 9:52 AM · MITK (v2024.06)
a178n created T30392: [Segmentation] Totalsegmentator & Otsu is buggy.
Apr 8 2024, 9:45 AM · MITK (v2024.06)

Apr 7 2024

a178n added a comment to T30391: [Segmentation] Python 3.12 support for installable AI tools.

Pushed new branch to rMITK MITK: feature/T30391-python312-update.

Apr 7 2024, 11:51 PM · MITK (v2024.06)
a178n triaged T30391: [Segmentation] Python 3.12 support for installable AI tools as Normal priority.
Apr 7 2024, 5:56 PM · MITK (v2024.06)

Apr 6 2024

a178n added a comment to T30300: Remember "Fast" checkbox setting.

Pushed new branch to rMITK MITK: feature/T30300-totalseg-fastbox.

Apr 6 2024, 11:55 AM · MITK (v2024.06)
a178n claimed T30300: Remember "Fast" checkbox setting.
Apr 6 2024, 11:38 AM · MITK (v2024.06)
floca triaged T30390: [SEG] Utilities - rework/fix boolean operations as High priority.
Apr 6 2024, 11:26 AM · MITK (v2024.06)

Apr 5 2024

s434n triaged T30389: [MxN] Expand options of (semi-)automated layout creation as Normal priority.
Apr 5 2024, 3:28 PM · Moved to git.dkfz.de, MITK

Apr 4 2024

a178n added a comment to T30357: [MedSAM] Add user documentaiton.

Pushed new branch to rMITK MITK: feature/T30357-medsam-doku.

Apr 4 2024, 11:24 PM · MITK (v2024.06)
s434n removed a project from T29526: [Segmentation] Workbench crashes when closing render window part with active tool: Missing Info.

Yes, this still happens as described above.

Apr 4 2024, 2:07 PM · MITK (v2024.06)

Apr 3 2024

floca moved T30353: [TotalSeg] Add confirmation dialog before exiting the tool from Backlog to Cycle on the MITK (v2024.06) board.
Apr 3 2024, 11:19 AM · MITK (v2024.06)
floca edited projects for T29526: [Segmentation] Workbench crashes when closing render window part with active tool, added: Missing Info; removed Request for Discussion.

does it still happen?

Apr 3 2024, 11:19 AM · MITK (v2024.06)
floca claimed T28796: [Segmentation][Utilities] Morphological Operations behave unexpectedly.
Apr 3 2024, 9:56 AM · MITK (v2024.06), Checklist

Apr 2 2024

floca raised the priority of T29526: [Segmentation] Workbench crashes when closing render window part with active tool from Normal to Unbreak Now!.

Discussion: How important is that?

Apr 2 2024, 7:12 PM · MITK (v2024.06)
floca closed T29369: [Segmentation Utilities] Handle / select different labels independently as Resolved.

Will be resolved/obsolete with current utilitie rework-

Apr 2 2024, 7:10 PM · MITK (v2024.06)
floca claimed T28500: Multilabel Segmentation Utilities do not work for multilabel segmentations.
Apr 2 2024, 7:06 PM · MITK (v2024.06), Missing Info
floca closed T27913: [Segmentation] Warnings in utilities view are inconsistent as Resolved.

Will be resolved/obsolete with current utilitie rework-

Apr 2 2024, 7:04 PM · MITK (v2024.06)
floca closed T27913: [Segmentation] Warnings in utilities view are inconsistent, a subtask of T28936: [Segmentation] Remove utilities redundancy with MultiLabelSegmentation, as Resolved.
Apr 2 2024, 7:04 PM · MITK (v2022.10), Breaking Change
floca added a comment to T27810: [Multilabel Segmentation] Inconsistencies and unclear functionality in operations of Utilities view.

Will be resolved/obsolete with current utilitie rework-

Apr 2 2024, 7:04 PM · MITK (v2022.10), Cleared, Restricted Project
floca claimed T28798: [Segmentation][MultiLabel][Utilities] UI is inconsistent / unstable.
Apr 2 2024, 7:01 PM · MITK (v2024.06), Checklist
floca claimed T28134: [Multilabel Segmentation] No warning triggered when using different mask geometries / dimensions in Utilities View.
Apr 2 2024, 7:01 PM · MITK (v2022.10), Cleared
floca moved T30208: [SEG] Add support to read/write stack of label images from/to a mitk label image from Segmentation to Cycle on the MITK (v2024.06) board.
Apr 2 2024, 6:59 PM · Moved to git.dkfz.de, MITK (v2024.12)

Mar 29 2024

floca triaged T30388: [EUCAIM] Provide MITK as interactive tool in EUCAIM as Normal priority.
Mar 29 2024, 10:38 AM · Moved to git.dkfz.de, Kaapana (internal), MITK

Mar 28 2024

kislinsk added a comment to T30386: VectorProperties are not getting modified by SetValue.

Yes, this is a bug. All ITK-based objects should call Modified() in their setter methods, if the values actually changed.

Mar 28 2024, 11:56 AM · Moved to git.dkfz.de, Request for Discussion, MITK
floca triaged T30387: [SEG] More visual feedback by supporting highlighted labels in render window. as Normal priority.
Mar 28 2024, 11:48 AM · MITK (v2024.06)
floca triaged T30386: VectorProperties are not getting modified by SetValue as Low priority.
Mar 28 2024, 11:43 AM · Moved to git.dkfz.de, Request for Discussion, MITK

Mar 21 2024

kislinsk closed T30382: Fix Doxygen warnings as Resolved.
Mar 21 2024, 2:17 PM · MITK
kislinsk added a comment to T30382: Fix Doxygen warnings.

Deleted branch from rMITK MITK: bugfix/T30382-FixDoxygenWarnings.

Mar 21 2024, 2:17 PM · MITK
kislinsk committed rMITK7301e0d3cf1e: Fix Doxygen warnings (authored by kislinsk).
Fix Doxygen warnings
Mar 21 2024, 2:16 PM
kislinsk committed rMITK63768887dbc1: Merge branch 'bugfix/T30382-FixDoxygenWarnings' into develop (authored by kislinsk).
Merge branch 'bugfix/T30382-FixDoxygenWarnings' into develop
Mar 21 2024, 2:16 PM
kislinsk added a comment to T30382: Fix Doxygen warnings.

Pushed new branch to rMITK MITK: bugfix/T30382-FixDoxygenWarnings.

Mar 21 2024, 2:14 PM · MITK
kislinsk triaged T30382: Fix Doxygen warnings as Low priority.
Mar 21 2024, 2:11 PM · MITK
kislinsk closed T30380: Doxygen does not parse header files in plugins as Invalid.

This was a red herring. Files in "internal" folders are explicitly excluded from documentation, while the "src" folders of plugins are considered.

Mar 21 2024, 1:57 PM · MITK (v2024.06)
kislinsk triaged T30380: Doxygen does not parse header files in plugins as High priority.
Mar 21 2024, 10:03 AM · MITK (v2024.06)

Mar 20 2024

kislinsk added a revision to T30377: Clean up/rewrite View Navigator: Unknown Object (Differential Revision).
Mar 20 2024, 9:14 PM · MITK (v2024.06)
kislinsk closed T30376: Reduce noise in terminal during startup as Resolved.
Mar 20 2024, 1:52 PM · MITK (v2024.06)
kislinsk added a comment to T30376: Reduce noise in terminal during startup.

Deleted branch from rMITK MITK: bugfix/T30376-ReduceStartupNoise.

Mar 20 2024, 1:52 PM · MITK (v2024.06)
kislinsk committed rMITK25ef827ed4e5: Change default log level of CTK Event Admin plugin from DEBUG to INFO (authored by kislinsk).
Change default log level of CTK Event Admin plugin from DEBUG to INFO
Mar 20 2024, 1:51 PM
kislinsk committed rMITK6754f86eeb58: Remove warning that never was printed in other than false-positive cases (authored by kislinsk).
Remove warning that never was printed in other than false-positive cases
Mar 20 2024, 1:51 PM
kislinsk committed rMITK85568094807a: Merge remote-tracking branch 'origin/bugfix/T30376-ReduceStartupNoise' into… (authored by kislinsk).
Merge remote-tracking branch 'origin/bugfix/T30376-ReduceStartupNoise' into…
Mar 20 2024, 1:51 PM
s434n placed T29333: [mxn multi widget] Measurements / planar figure not working up for grabs.
Mar 20 2024, 1:50 PM · Moved to git.dkfz.de, MITK (v2024.12)
s434n triaged T30379: [Volume Visualization] Create generic initialization as Low priority.
Mar 20 2024, 1:48 PM · Moved to git.dkfz.de, MITK (v2024.12)
a178n assigned T29076: [Segmentation] Pressing DEL should delete a label to floca.
Mar 20 2024, 11:57 AM · MITK (v2024.06), Checklist
a178n removed a project from T30306: [Segmentation] Convertion from semantic segmentations to instance segmentations: Request for Discussion.
Mar 20 2024, 11:54 AM · Moved to git.dkfz.de, MITK
a178n assigned T30306: [Segmentation] Convertion from semantic segmentations to instance segmentations to floca.
Mar 20 2024, 11:53 AM · Moved to git.dkfz.de, MITK
a178n removed a project from T29584: [Interpolation] Confirming 3D interpolation does not set mode to "disabled": Request for Discussion.

Discussion result - Change checklist

Mar 20 2024, 11:48 AM · Moved to git.dkfz.de, MITK (v2024.12), Checklist
a178n edited projects for T29557: [Segmentation] "Delete group" button is inactive if there are multiple groups but no labels, added: MITK, Next Milestone; removed Request for Discussion, MITK (v2024.06).

Discussion result - Evaluate if in case of no selection (no labels), the highlight is enough to indicate a "selected group".

Mar 20 2024, 11:43 AM · Moved to git.dkfz.de, MITK (v2024.12)
s434n removed a project from T30241: [MxN] Rethink select-all logic in MxN data selection: Request for Discussion.
Mar 20 2024, 11:37 AM · Moved to git.dkfz.de, MITK (v2024.12)
s434n added a parent task for T30241: [MxN] Rethink select-all logic in MxN data selection: T30360: [MxN] Add group synchronization.
Mar 20 2024, 11:36 AM · Moved to git.dkfz.de, MITK (v2024.12)
s434n added a subtask for T30360: [MxN] Add group synchronization: T30241: [MxN] Rethink select-all logic in MxN data selection.
Mar 20 2024, 11:36 AM · Moved to git.dkfz.de, MITK
a178n removed a project from T30375: [Statistics] Remove HotspotMaskGenerator or rework and fix tests: Request for Discussion.

Discussion result - Decided on (a)

Mar 20 2024, 11:33 AM · Moved to git.dkfz.de, MITK (v2024.12)
a178n removed a project from T30377: Clean up/rewrite View Navigator: Request for Discussion.
Mar 20 2024, 11:28 AM · MITK (v2024.06)
a178n removed a project from T30376: Reduce noise in terminal during startup: Request for Discussion.
Mar 20 2024, 11:15 AM · MITK (v2024.06)
kislinsk moved T30376: Reduce noise in terminal during startup from Backlog to MITK Meeting on the Request for Discussion board.
Mar 20 2024, 10:35 AM · MITK (v2024.06)
kislinsk added a project to T30376: Reduce noise in terminal during startup: Request for Discussion.
Mar 20 2024, 10:35 AM · MITK (v2024.06)
kislinsk moved T30377: Clean up/rewrite View Navigator from Backlog to MITK Meeting on the Request for Discussion board.
Mar 20 2024, 10:34 AM · MITK (v2024.06)
kislinsk added a project to T30377: Clean up/rewrite View Navigator: Request for Discussion.
Mar 20 2024, 10:34 AM · MITK (v2024.06)
kislinsk added a comment to T30377: Clean up/rewrite View Navigator.

Pushed new branch to rMITK MITK: bugfix/T30377-ViewNavigator.

Mar 20 2024, 9:50 AM · MITK (v2024.06)
kislinsk added a subtask for T30283: Make MITK Workbench more customizable for end-users: T30377: Clean up/rewrite View Navigator.
Mar 20 2024, 9:42 AM · Moved to git.dkfz.de, MITK (v2024.12)
kislinsk added a parent task for T30377: Clean up/rewrite View Navigator: T30283: Make MITK Workbench more customizable for end-users.
Mar 20 2024, 9:42 AM · MITK (v2024.06)
kislinsk renamed T30377: Clean up/rewrite View Navigator from Clean-up/rewrite View Navigator to Clean up/rewrite View Navigator.
Mar 20 2024, 9:41 AM · MITK (v2024.06)
kislinsk triaged T30377: Clean up/rewrite View Navigator as Normal priority.
Mar 20 2024, 9:41 AM · MITK (v2024.06)

Mar 19 2024

floca claimed T29390: How to ease the handling of external generated segmentations.
Mar 19 2024, 9:53 AM · MITK (v2024.06)
floca committed rMITKd3f539e52e74: T26350 Add multi label support to statistic (authored by floca).
T26350 Add multi label support to statistic
Mar 19 2024, 9:38 AM
floca committed rMITKa84094791be0: BREAKING! Deactivate Hotspot generator (authored by floca).
BREAKING! Deactivate Hotspot generator
Mar 19 2024, 9:38 AM
floca committed rMITKa8890bead981: Fixed review remarks (authored by floca).
Fixed review remarks
Mar 19 2024, 9:38 AM
floca committed rMITKfaea919979f8: fixed GCC errors (authored by floca).
fixed GCC errors
Mar 19 2024, 9:38 AM
floca committed rMITK8ef6457b1352: Fixed the correct display of statistic elements that are WIP or N/A. (authored by floca).
Fixed the correct display of statistic elements that are WIP or N/A.
Mar 19 2024, 9:38 AM
floca committed rMITKc951604fdac0: Fixed compiler issues (authored by floca).
Fixed compiler issues
Mar 19 2024, 9:38 AM
floca committed rMITK48b81bb57bc2: Adapted widget text in order to make the purpose easier to grasp. (authored by floca).
Adapted widget text in order to make the purpose easier to grasp.
Mar 19 2024, 9:38 AM
floca committed rMITKfe59b6b331b6: Ensured that changing the segmentation content also triggers (authored by floca).
Ensured that changing the segmentation content also triggers
Mar 19 2024, 9:38 AM
floca committed rMITKbab3830e69cc: Fixed crash of statstic view if a mask with only empty labels is selected. (authored by floca).
Fixed crash of statstic view if a mask with only empty labels is selected.
Mar 19 2024, 9:38 AM
floca committed rMITKb236a2ecfa87: Added mutex to secure internal label and group maps of LabelSetImage. (authored by floca).
Added mutex to secure internal label and group maps of LabelSetImage.
Mar 19 2024, 9:38 AM
floca committed rMITK374d20821ecb: Fixed implementation/usage of node in QmitkMultiLabelManager (authored by floca).
Fixed implementation/usage of node in QmitkMultiLabelManager
Mar 19 2024, 9:38 AM
floca committed rMITK30c2d7bfbd7f: Added modified to the mask generator to ensure correct update of the mask (authored by floca).
Added modified to the mask generator to ensure correct update of the mask
Mar 19 2024, 9:37 AM
floca committed rMITK6b53515806d7: BREAKING!!! MaskGenerator interface was changed. (authored by floca).
BREAKING!!! MaskGenerator interface was changed.
Mar 19 2024, 9:37 AM
floca committed rMITK541bc024b09b: Introduced ITKEventObserverGuards to allow the combination of (authored by floca).
Introduced ITKEventObserverGuards to allow the combination of
Mar 19 2024, 9:37 AM
floca committed rMITK3be31e70397d: Make histogram group invisible as default (authored by floca).
Make histogram group invisible as default
Mar 19 2024, 9:37 AM
floca committed rMITKc70dd4ac8b48: Improved performance of statistics computation in case of many images/masks (authored by floca).
Improved performance of statistics computation in case of many images/masks
Mar 19 2024, 9:37 AM
floca committed rMITK3866be21a224: Add mitk::WeakPointer support for const types. (authored by floca).
Add mitk::WeakPointer support for const types.
Mar 19 2024, 9:37 AM
floca closed T27655: [statistics] Logic of DataGeneratorBase blocks the UI thread as Resolved by committing rMITKc70dd4ac8b48: Improved performance of statistics computation in case of many images/masks.
Mar 19 2024, 9:37 AM · MITK (v2024.06)
floca closed T30347: Improve mitk::WeakPointer to support const pointer as Resolved by committing rMITK3866be21a224: Add mitk::WeakPointer support for const types..
Mar 19 2024, 9:37 AM · MITK
floca committed rMITKe845d0e97b40: Added Label color decoration to label tree items (authored by floca).
Added Label color decoration to label tree items
Mar 19 2024, 9:37 AM
floca committed rMITKfd5dbfe4805e: Fixed error in the QmitkImageStatisticView as histogram (authored by floca).
Fixed error in the QmitkImageStatisticView as histogram
Mar 19 2024, 9:37 AM
floca committed rMITK2e9914b612e8: Fixed error in FeatureBasedEdgeDetectionFilter as mask was ignored. (authored by floca).
Fixed error in FeatureBasedEdgeDetectionFilter as mask was ignored.
Mar 19 2024, 9:37 AM
floca committed rMITK59151159b8c6: Fixed crash in statistic model if "no zeros" is activated (authored by floca).
Fixed crash in statistic model if "no zeros" is activated
Mar 19 2024, 9:37 AM
floca committed rMITK30e8658d800f: Added modified to the mask generator to ensure correct update of the mask (authored by floca).
Added modified to the mask generator to ensure correct update of the mask
Mar 19 2024, 9:37 AM
floca committed rMITKec323732ba9a: Adapted Qmitk classes to statistics container rework (authored by floca).
Adapted Qmitk classes to statistics container rework
Mar 19 2024, 9:37 AM
floca closed T27258: [Image statistics] Deprecate QmitkImageStatisticsCalculationJob as Resolved by committing rMITKd618575b62b5: Removed QmitkImageStatisticsCalculationJob.
Mar 19 2024, 9:37 AM · MITK (v2024.06)
floca committed rMITKd618575b62b5: Removed QmitkImageStatisticsCalculationJob (authored by floca).
Removed QmitkImageStatisticsCalculationJob
Mar 19 2024, 9:37 AM
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