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MITK_issues_2022
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MITK_issues_2022
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Unbreak Now! (3)

T30402 [Segmentation] Dynamic segmentations shown across multiple timesteps
MITK
Fri, Apr 26, 4:49 PM
T30157 [DCM][SEG] potential in compliance to DICOM segmentation: clarify correct use of pixel value/segment number
Request for Discussion
Missing Info
MITK (v2024.06)
Dec 5 2023, 10:38 AM
T29526 [Segmentation] Workbench crashes when closing render window part with active tool
MITK (v2024.06)
Thu, Apr 4, 2:07 PM

Needs Triage (5)

T30359 MITK MiniApps in Kaapana
MITK
Mar 7 2024, 11:40 AM
Assigned: floca
T30310 Add new views, e.g. for Seg Task List or Perfusion
MITK
Missing Info
Feb 7 2024, 11:22 AM
T29506 Create list of awards that IMSY people can apply to
Restricted Project
Mar 28 2023, 1:34 PM
Assigned: t470h
T29447 ML-based tractography module of MITK diffusion
No Projects
Jan 25 2023, 1:36 PM
T29356 Infibtion
MITK Diffusion
Nov 9 2022, 1:11 PM
Assigned: r948e

High (17)

T30375 [Statistics] Remove HotspotMaskGenerator or rework and fix tests
MITK
Next Milestone
Mar 20 2024, 11:33 AM
T30363 [Py] UC2.4 - Load image and clone it
MITK
Mar 7 2024, 11:08 AM
T30362 [Py] UC2.1 - Load images and save again
MITK
Mar 7 2024, 11:17 AM
Assigned: a178n
T30361 [Py] pyMITK package to use MITK in a python environement
MITK
Mar 7 2024, 10:56 AM
T30353 [TotalSeg] Add confirmation dialog before exiting the tool
MITK (v2024.06)
Wed, Apr 17, 9:47 AM
Assigned: a178n
T30194 [SEG] Refactor LabelSetImage to MultiLabelSegmentation class
Next Milestone
Sep 8 2023, 12:14 PM
Assigned: floca
T30180 [Statistics] Median is approximated and completely off if sample size is small
MITK (v2024.06)
Dec 5 2023, 10:40 AM
T30170 [Py] Python in MITK
MITK
Mar 7 2024, 10:55 AM
T30158 [DCM][SEG] Check why unittests did not detect breaking support of DCM Seg and fix the (unit) test
MITK (v2024.06)
Dec 5 2023, 10:38 AM
T29553 Include label instances in label set presets
MITK (v2024.06)
Dec 5 2023, 10:39 AM
T29483 [Segmentation] Gracefully handle out of memory situations
MITK (v2024.06)
Dec 5 2023, 10:39 AM
T29479 Planar figures do not work as expected on arbitrarily oriented slices
MITK (v2024.06)
Dec 5 2023, 10:38 AM
T29437 [SEG] Add TotalSegmentator
MITK
Mon, Apr 8, 10:17 AM
T29429 org.mitk.gui.qt.igt.app.ultrasoundtrackingnavigation: Crash during initialization of combined modality
MITK
IGT
Dec 7 2022, 2:54 PM
T29392 [SEG] Add dedicated writer to store multi-label images in nifti
MITK (v2024.06)
Dec 5 2023, 10:38 AM
T29322 [SEG] Refactor code to avoid FillSliceInSlice and FillContourInSlice
MITK (v2024.06)
Feb 19 2024, 10:11 PM
T29108 MITK-US: Problems when unfreezing US image
MITK
IGT
Apr 1 2022, 9:37 AM

Normal (75)

T30401 Thumbnail image generation should be moved to QmitkNodeDescriptor
MITK
Fri, Apr 26, 3:06 PM
T30398 3D interpolation using SAM tool
MITK
Thu, Apr 25, 9:11 AM
T30394 [MxN] Disconnect MxN windows from StdMultiWidget
MITK
Mon, Apr 15, 12:47 PM
T30391 [Segmentation] Python 3.12 support for installable AI tools
MITK (v2024.06)
Thu, Apr 18, 4:39 PM
Assigned: a178n
T30389 [MxN] Expand options of (semi-)automated layout creation
MITK
Mon, Apr 22, 10:24 AM
T30388 [EUCAIM] Provide MITK as interactive tool in EUCAIM
MITK
Kaapana (internal)
Fri, Mar 29, 10:38 AM
T30372 [Statistics] Replace secondary mask in mitk::ImageStatisticsGenerator by an "AndMaskGenerator"
MITK
Next Milestone
Breaking Change
Mar 18 2024, 5:42 PM
T30370 [Statistics] Order labels the same way as in the Segmentation View
MITK (v2024.06)
Mar 14 2024, 2:21 PM
T30369 [Statistics] Position of minimum and maximum are one off for masks of rotated images
MITK (v2024.06)
Mar 14 2024, 2:13 PM
T30360 [MxN] Add group synchronization
MITK
Mar 20 2024, 11:36 AM
T30357 [MedSAM] Add user documentaiton
MITK (v2024.06)
Tue, Apr 9, 4:13 PM
Assigned: a178n
T30356 [MedSAM] Create Test user checklist
MITK (v2024.06)
Mar 6 2024, 9:52 AM
Assigned: a178n
T30355 [Seg] MedSAM as new 2D Tool in MITK
MITK (v2024.06)
Fri, Apr 26, 5:56 PM
Assigned: a178n
T30354 [MedSAM] Update SAM python daemon script for MedSAM
MITK (v2024.06)
Mar 6 2024, 12:18 PM
Assigned: a178n
T30348 [Statistics] QmitkImagesStatisticsTreeModel currently does not update when names of inputs changes
MITK
Mar 6 2024, 11:30 AM
T30338 org.mitk.gui.qt.ultrasound: playing video files is buggy
MITK
IGT
Feb 23 2024, 12:33 PM
T30335 [Py] UC2.2 - Load images and manipulate with a sitk filter
MITK
Mar 7 2024, 11:15 AM
T30333 Add introductory startup dialog or Welcome page
MITK (v2024.06)
Thu, Apr 25, 10:41 AM
T30328 Failure when loading DICOM files with missing series instance UID
MITK (v2024.06)
Feb 27 2024, 9:09 AM
T30314 MedSAM in MITK
MITK (v2024.06)
Mar 6 2024, 12:17 PM
T30313 SegmentAnyBone in MITK
MITK
Feb 12 2024, 2:41 PM
T30301 Move Totalsegmentator installation into Preferences
MITK (v2024.06)
Dec 19 2023, 1:57 PM
T30293 Introduce new interoperability/developer-friendly scene file format (including reader)
MITK (v2024.06)
Dec 11 2023, 11:56 AM
T30286 Update to DCMQI 1.3.1
MITK (v2024.06)
Feb 27 2024, 9:13 AM
Assigned: floca
T30283 Make MITK Workbench more customizable for end-users
MITK (v2024.06)
Thu, Apr 25, 10:41 AM
T30279 [Statistics] Fix cutoff of non-closed planar figures
MITK (v2024.06)
Dec 5 2023, 10:38 AM
T30268 [Checklist] Segmentation 3D Interpolation
Checklist
MITK (v2024.06)
Tue, Apr 9, 12:25 PM
T30267 [Segmentation] Undo/Redo does not work for many aspects of segmentation
Checklist
MITK (v2024.06)
Feb 22 2024, 4:58 PM
T30259 [Segmentation] Available models dropdown is empty in nnUNet tool
MITK
Nov 20 2023, 9:05 AM
T30257 Changing opacity messes up rendering order
Checklist
MITK (v2024.06)
Dec 5 2023, 10:38 AM
T30250 [MxN] Windows created by preset have no in-window menus
MITK (v2024.06)
Wed, Apr 10, 10:50 AM
T30249 [Py] UC2.3 - Load images and explore properties
MITK
Mar 7 2024, 11:15 AM
T30247 MONAILabel: Improve doxygen docstrings
MITK (v2024.06)
Thu, Apr 18, 4:39 PM
Assigned: a178n
T30242 [MONAILabel] Trouble activating SSL support in Httplib
MITK (v2024.06)
Dec 5 2023, 10:38 AM
T30241 [MxN] Rethink select-all logic in MxN data selection
MITK (v2024.06)
Mar 20 2024, 11:37 AM
T30240 MonaiLabel: How to support more apps
MITK (v2024.06)
Dec 5 2023, 10:38 AM
T30232 MONAI Label: Level Window contrast effects
MITK (v2024.06)
Mar 6 2024, 9:52 AM
T30231 Monailabel User documentation
MITK (v2024.06)
Mar 6 2024, 9:52 AM
Assigned: a178n
T30229 MONAI Label tool: Introduce time out parameter entry in Preferences
Request for Discussion
MITK (v2024.06)
Dec 5 2023, 10:38 AM
T30227 Link error between plugins F1-Help files
MITK
Oct 18 2023, 11:23 AM
T30210 [SEG] Add dedicated reader for label image stack support
MITK (v2024.06)
Dec 5 2023, 10:38 AM
Assigned: floca
T30209 [SEG] Add a writer for label image stack support
MITK (v2024.06)
Dec 5 2023, 10:38 AM
Assigned: floca
T30208 [SEG] Add support to read/write stack of label images from/to a mitk label image
MITK (v2024.06)
Tue, Apr 2, 6:59 PM
Assigned: floca
T30204 Improve visibility between help files for perfusion
MITK (v2024.06)
Request for Discussion
Feb 28 2024, 9:21 AM
T30186 PixelDumper view in MITK release
MITK
Sep 20 2023, 11:37 AM
T30185 Fix typos in bootstrap variables
challengeR
Aug 11 2023, 10:46 AM
Assigned: eisenman
T30183 [REG] Add Elastix support to MITK
MITK
Aug 4 2023, 10:22 AM
T30182 [SEG] Storing segmentation as DICOM Seg failes if reference image is not a valid DICOM
MITK (v2024.06)
Feb 27 2024, 9:23 AM
T30181 Add option for a "mean" line profile in statistics view
MITK
Restricted Project
Aug 9 2023, 12:14 PM
T30175 [Py] UC1.4 - All images in data storage that are visible are set opacity 50% in a specific render window
MITK
Mar 7 2024, 11:17 AM
T30174 [Py] UC1.3 - Selected image can be manipulated with simpleITK and added to data storage
MITK
Mar 7 2024, 11:16 AM
T30173 [Py] UC1.2 - Selected image are stored
MITK
Mar 7 2024, 11:16 AM
T30172 [Py] UC1.1 - Selected image can be manipulated with simpleITK and updated
MITK
Mar 7 2024, 11:16 AM
T30171 [Py] View to execute scripts that interact with the rest of the workbench
MITK
Mar 7 2024, 10:56 AM
T30168 Fail to load NIFTI images due to error "itk only supports orthonormal direction cosines"
MITK
Sep 20 2023, 11:57 AM
T30164 [Segmentation] [Bug] 2D RGB image not correctly handled by SegPreviewTool API tool
Request for Discussion
MITK (v2024.06)
Dec 5 2023, 10:38 AM
T30160 Move MITK to our GitLab instance
MITK (v2024.06)
Dec 5 2023, 10:38 AM
Assigned: kislinsk
T30154 MONAI Label server usage issues
MITK
Jul 11 2023, 11:38 AM
T30151 MONAI Label tool support CLICK interaction patterns
MITK (v2024.06)
Feb 27 2024, 9:14 AM
T30149 nnUNet(v2) in MITK
MITK (v2024.06)
Dec 5 2023, 10:38 AM
T30147 MONAI Label: New approach using python wrapper??
Request for Discussion
MITK (v2024.06)
Feb 27 2024, 9:14 AM
T29654 SAM tool: Preview not fully cleared when Reset Picks button is clicked
MITK (v2024.06)
Feb 27 2024, 9:14 AM
T29653 SAM tool: Install process can be non-blocking
MITK (v2024.06)
Feb 27 2024, 9:14 AM
T29652 [Preferences] Cannot open SAM preference page after tool activation
MITK (v2024.06)
Fri, Apr 12, 1:42 PM
T29651 [Preferences] SAM tool Preferences not rendered nicely on MacOS
MITK (v2024.06)
Dec 5 2023, 10:38 AM
Assigned: a178n
T29648 SAM Python: Improve the wrapper to be used independently without MITK
MITK
Jun 26 2023, 7:27 PM
T29639 [Registration] Mapping crashes when super-sampling is activated
Missing Info
MITK (v2024.06)
Dec 5 2023, 10:38 AM
T29638 ModelFit Inspector crahes sometimes on data selection
MITK (v2024.06)
Feb 28 2024, 9:23 AM
T29631 Integration of an updated Feature Branch
MITK
Jul 26 2023, 12:01 PM
T29615 [Segmentation] Multi-threading support for compute heavy tools
MITK
May 24 2023, 1:47 PM
T29597 TotalSeg didn't remember python environment
Checklist
MITK (v2024.06)
Dec 5 2023, 10:38 AM
Assigned: a178n
T29596 Move out FAST checkbox from Advanced
Checklist
Request for Discussion
MITK (v2024.06)
Dec 5 2023, 10:39 AM
T29595 Make nnUNet folder parsing more resilient to stray folders
Checklist
Request for Discussion
MITK (v2024.06)
Dec 5 2023, 10:39 AM
T29594 Improve MITK help text for nnUNet tool
Request for Discussion
Checklist
MITK (v2024.06)
Dec 5 2023, 10:38 AM
T29582 [Segmentation] Error when pressing "Undo" after undoing all fill changes
Checklist
MITK (v2024.06)
Dec 5 2023, 10:39 AM

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