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Nov 4 2020

maleike committed rMITK3c0ca99ee601: Re-introduce call to enable render-window menus (removed without intention) (authored by maleike).
Re-introduce call to enable render-window menus (removed without intention)
Nov 4 2020, 7:59 AM
kislinsk committed rMITK86e5cf2521d3: Merge branch 'bugfix/T26745-MITK-VTK-Interaction' into develop (authored by kislinsk).
Merge branch 'bugfix/T26745-MITK-VTK-Interaction' into develop
Nov 4 2020, 7:59 AM
kislinsk added a comment to T26745: MITK's interaction not the first to handle events anymore -- QVTKOpenGLWidget::event() changed since VTK 7.0.0 (MITK 2016.11).

Pushed new branch bugfix/T26745-MITK-VTK-Interaction.

Nov 4 2020, 7:58 AM · MITK, Pull Request
kislinsk merged task T26835: Crash on change of Surface interpolation from Phong to Flat into T27461: Update MITK to use VTK 9.
Nov 4 2020, 7:29 AM · Pull Request, MITK
kislinsk merged T26835: Crash on change of Surface interpolation from Phong to Flat into T27461: Update MITK to use VTK 9.
Nov 4 2020, 7:29 AM · Noteworthy, MITK (v2021.02)
kislinsk closed T27247: MITK_SHOW_CONSOLE_WINDOW is not honored in mitk_create_executable function as Resolved.
Nov 4 2020, 7:19 AM · Pull Request, Cleared, MITK (v2021.02)
kislinsk added a comment to T27247: MITK_SHOW_CONSOLE_WINDOW is not honored in mitk_create_executable function.

Deleted branch feature/T27247-ShowConsoleWindow.

Nov 4 2020, 7:19 AM · Pull Request, Cleared, MITK (v2021.02)
kislinsk committed rMITK1f615493bd49: Add support for MITK_SHOW_CONSOLE_WINDOW and WINDOWS_ICON_RESOURCE_FILE (authored by Sven Lafebre <s.lafebre@runbox.com>).
Add support for MITK_SHOW_CONSOLE_WINDOW and WINDOWS_ICON_RESOURCE_FILE
Nov 4 2020, 7:19 AM
kislinsk committed rMITKd587c1231c13: Merge branch 'feature/T27247-ShowConsoleWindow' into develop (authored by kislinsk).
Merge branch 'feature/T27247-ShowConsoleWindow' into develop
Nov 4 2020, 7:19 AM
kislinsk added a comment to T27247: MITK_SHOW_CONSOLE_WINDOW is not honored in mitk_create_executable function.

Pushed new branch feature/T27247-ShowConsoleWindow.

Nov 4 2020, 7:18 AM · Pull Request, Cleared, MITK (v2021.02)
kislinsk claimed T27247: MITK_SHOW_CONSOLE_WINDOW is not honored in mitk_create_executable function.
Nov 4 2020, 7:02 AM · Pull Request, Cleared, MITK (v2021.02)

Nov 3 2020

wiesenfa added a comment to T27360: compatibility with R4.0.0.

I think this may be closed. There have not been any problems with R 4 and R 4 is generally unproblematic.
Agreed?

Nov 3 2020, 8:41 PM · challengeR (v1.0)
wiesenfa added a comment to T27915: Podium plot shrinks for long algorithm names.

hm, how do you propose to deal with that? Adapt font size of algorithm names? These might get tiny then....

Nov 3 2020, 8:39 PM · challengeR (v1.0)
eisenman created T27925: Use cases of annotator option.
Nov 3 2020, 4:33 PM · challengeR
eisenman committed rCHALLENGER9dd12526dfd5: Make case not optional (authored by eisenman).
Make case not optional
Nov 3 2020, 3:42 PM
eisenman committed rCHALLENGER83a9bff486e1: Add documentation for as.challenge (authored by eisenman).
Add documentation for as.challenge
Nov 3 2020, 3:42 PM
kahl added a comment to T27923: Integrate possibility to execute Python Code in MITK .

Pushed new branch feature/T27923-execute-python-code-in-mitk.

Nov 3 2020, 3:15 PM · MITK
groehl added a member for IMSY: t391x.
Nov 3 2020, 2:33 PM
dreherk added a member for Photoacoustics: t391x.
Nov 3 2020, 2:32 PM
floca committed rRTTBc1f0afd65322: Corrected visiblity of base class (authored by floca).
Corrected visiblity of base class
Nov 3 2020, 10:53 AM
kahl triaged T27923: Integrate possibility to execute Python Code in MITK as Normal priority.
Nov 3 2020, 8:34 AM · MITK

Nov 2 2020

kislinsk added a comment to T27920: [MITKDoc] Fix Doxygen warnings.

Deleted branch bugfix/T27920-ReduceDoxygenWarnings.

Nov 2 2020, 10:35 PM · Noteworthy, MITK (v2021.02)
kislinsk renamed T27920: [MITKDoc] Fix Doxygen warnings from [MITKDoc] Reduce number of doxygen warnings to [MITKDoc] Fix Doxygen warnings.
Nov 2 2020, 10:35 PM · Noteworthy, MITK (v2021.02)
kislinsk committed rMITK485773e48245: Merge branch 'bugfix/T27920-ReduceDoxygenWarnings' into develop (authored by kislinsk).
Merge branch 'bugfix/T27920-ReduceDoxygenWarnings' into develop
Nov 2 2020, 10:33 PM
eisenman moved T27922: Remove network plot from report overview from In Progress to Done on the challengeR (v1.0) board.
Nov 2 2020, 4:52 PM · challengeR (v1.0)
eisenman committed rCHALLENGER192c5dedf226: Merge branch 'feature/T27922-RemoveNetworkPlotFromOverview' into develop (authored by eisenman).
Merge branch 'feature/T27922-RemoveNetworkPlotFromOverview' into develop
Nov 2 2020, 4:51 PM
eisenman committed rCHALLENGER3f51b34336f0: Remove network plot from overview (authored by eisenman).
Remove network plot from overview
Nov 2 2020, 4:49 PM
eisenman moved T27922: Remove network plot from report overview from Backlog to In Progress on the challengeR (v1.0) board.
Nov 2 2020, 4:47 PM · challengeR (v1.0)
eisenman created T27922: Remove network plot from report overview.
Nov 2 2020, 4:46 PM · challengeR (v1.0)
kislinsk added a comment to T27920: [MITKDoc] Fix Doxygen warnings.

~ 310 warnings left

Nov 2 2020, 3:46 PM · Noteworthy, MITK (v2021.02)
kislinsk committed rMITKfc799b4fe88f: Merge branch 'bugfix/T27920-ReduceDoxygenWarnings' into develop (authored by kislinsk).
Merge branch 'bugfix/T27920-ReduceDoxygenWarnings' into develop
Nov 2 2020, 3:39 PM
schererj added a member for Kaapana (internal): s429r.
Nov 2 2020, 2:47 PM
kislinsk added a member for MIC: s429r.
Nov 2 2020, 2:34 PM
kislinsk added a member for MIC: kislinsk.
Nov 2 2020, 2:34 PM
kislinsk added a comment to T27920: [MITKDoc] Fix Doxygen warnings.

~ 530 warnings left

Nov 2 2020, 10:58 AM · Noteworthy, MITK (v2021.02)
kislinsk committed rMITKfda8e176b4bf: Merge branch 'bugfix/T27920-ReduceDoxygenWarnings' into develop (authored by kislinsk).
Merge branch 'bugfix/T27920-ReduceDoxygenWarnings' into develop
Nov 2 2020, 10:57 AM
schererj updated the image for Kaapana (internal) from F1910035: profile to F1910040: profile.
Nov 2 2020, 9:21 AM
schererj updated the image for Kaapana (internal) from F1910033: profile to F1910035: profile.
Nov 2 2020, 9:18 AM
schererj updated the image for Kaapana (internal) from F1453107: profile to F1910033: profile.
Nov 2 2020, 9:17 AM
kislinsk committed rMITKa77c2be4345b: Merge branch 'bugfix/T27920-ReduceDoxygenWarnings' into develop (authored by kislinsk).
Merge branch 'bugfix/T27920-ReduceDoxygenWarnings' into develop
Nov 2 2020, 12:13 AM

Nov 1 2020

kislinsk committed rMITKa60269258c57: Merge branch 'bugfix/T27920-ReduceDoxygenWarnings' into develop (authored by kislinsk).
Merge branch 'bugfix/T27920-ReduceDoxygenWarnings' into develop
Nov 1 2020, 11:52 PM
kislinsk committed rMITK8909ec8fb206: Merge branch 'bugfix/T27920-ReduceDoxygenWarnings' into develop (authored by kislinsk).
Merge branch 'bugfix/T27920-ReduceDoxygenWarnings' into develop
Nov 1 2020, 11:44 PM
kislinsk committed rMITK7f3e45e4ea63: Merge branch 'bugfix/T27920-ReduceDoxygenWarnings' into develop (authored by kislinsk).
Merge branch 'bugfix/T27920-ReduceDoxygenWarnings' into develop
Nov 1 2020, 11:37 PM
kislinsk added a comment to T27614: Equalize reinit behavior of Segmentation View and Multilabel Segmentation View.

Not easy to answer. Reinit can be a rather disruptive operation canceling the users positioning of the cross hair for example. So it would be polite to ask I guess. On the other hand, the user obviously want to create a segmentation so (s)he hasn't any chance to prevent that. So I vote for the less chatty approach without asking.

Nov 1 2020, 11:34 PM · MITK
kislinsk added a comment to T27920: [MITKDoc] Fix Doxygen warnings.

~ 750 warnings left

Nov 1 2020, 11:27 PM · Noteworthy, MITK (v2021.02)
floca added a comment to T27614: Equalize reinit behavior of Segmentation View and Multilabel Segmentation View.

@kislinsk do you have an opionon which option to choose UX wise?

Nov 1 2020, 10:16 PM · MITK
floca committed rRTTB391f55d2fc66: First implementation of gamma index (authored by floca).
First implementation of gamma index
Nov 1 2020, 9:52 PM
floca committed rRTTBfe85d66593ba: Extracted test dummies/mock from CoreTest into TestHelper module (authored by floca).
Extracted test dummies/mock from CoreTest into TestHelper module
Nov 1 2020, 9:52 PM
floca committed rRTTB869649c3f886: Fixed warnings in tests (authored by floca).
Fixed warnings in tests
Nov 1 2020, 9:52 PM
floca committed rRTTBd2bec0ef14e6: Added accessor getter to interpolator base. (authored by floca).
Added accessor getter to interpolator base.
Nov 1 2020, 9:52 PM
floca committed rRTTB18108ef5b9f0: Improved const correctness and parameter passing. (authored by floca).
Improved const correctness and parameter passing.
Nov 1 2020, 9:52 PM
floca committed rRTTB4a6d77f0e383: Added clone functionality to GeometricInfo. (authored by floca).
Added clone functionality to GeometricInfo.
Nov 1 2020, 9:52 PM
floca committed rRTTB779c333ac91c: Started with gamma index draft (unfinished) (authored by floca).
Started with gamma index draft (unfinished)
Nov 1 2020, 9:52 PM
kislinsk committed rMITK61ac3494016f: Merge branch 'bugfix/T27920-ReduceDoxygenWarnings' into develop (authored by kislinsk).
Merge branch 'bugfix/T27920-ReduceDoxygenWarnings' into develop
Nov 1 2020, 8:18 AM

Oct 31 2020

kislinsk committed rMITK99cf2159c4cf: Merge branch 'bugfix/T27920-ReduceDoxygenWarnings' into develop (authored by kislinsk).
Merge branch 'bugfix/T27920-ReduceDoxygenWarnings' into develop
Oct 31 2020, 11:43 PM
kislinsk committed rMITK266ca1b252ec: Merge branch 'bugfix/T27920-ReduceDoxygenWarnings' into develop (authored by kislinsk).
Merge branch 'bugfix/T27920-ReduceDoxygenWarnings' into develop
Oct 31 2020, 7:33 AM

Oct 30 2020

kislinsk added a project to T27920: [MITKDoc] Fix Doxygen warnings: Noteworthy.

We do not need Ant and the BlueBerryDocTools anymore since I have migrated the extension-point reference documentation mechanism to Doxygen.

Oct 30 2020, 11:30 PM · Noteworthy, MITK (v2021.02)
kislinsk committed rMITK0a90f17503a9: Merge branch 'bugfix/T27920-ReduceDoxygenWarnings' into develop (authored by kislinsk).
Merge branch 'bugfix/T27920-ReduceDoxygenWarnings' into develop
Oct 30 2020, 11:29 PM
kislinsk added a comment to T27920: [MITKDoc] Fix Doxygen warnings.

Pushed new branch bugfix/T27920-ReduceDoxygenWarnings.

Oct 30 2020, 11:46 AM · Noteworthy, MITK (v2021.02)
kislinsk updated subscribers of T27920: [MITKDoc] Fix Doxygen warnings.
Oct 30 2020, 9:24 AM · Noteworthy, MITK (v2021.02)
kislinsk merged T27387: Link in Documentation wrong into T27920: [MITKDoc] Fix Doxygen warnings.
Oct 30 2020, 7:15 AM · Noteworthy, MITK (v2021.02)
kislinsk merged task T27387: Link in Documentation wrong into T27920: [MITKDoc] Fix Doxygen warnings.
Oct 30 2020, 7:15 AM · MITK
kislinsk moved T27920: [MITKDoc] Fix Doxygen warnings from Backlog to Documentation on the MITK (v2021.02) board.
Oct 30 2020, 7:15 AM · Noteworthy, MITK (v2021.02)
kislinsk triaged T27920: [MITKDoc] Fix Doxygen warnings as Normal priority.
Oct 30 2020, 7:15 AM · Noteworthy, MITK (v2021.02)

Oct 29 2020

kislinsk created Kaapana Elevated Branching Privileges.
Oct 29 2020, 4:37 PM
isensee added a member for Deep Learning: full.
Oct 29 2020, 2:37 PM

Oct 28 2020

kislinsk added a comment to T27908: [MITKDoc] Update Multilabel Segmentation documentation regarding label presets.

Deleted branch bugfix/T27908-UpdateMultilabelSegmentationDoc.

Oct 28 2020, 10:41 AM · Cleared, MITK (v2021.02)
kislinsk committed rMITK7e02155bc8ba: Add section about label set presets to multilabel segmentation documentation (authored by kislinsk).
Add section about label set presets to multilabel segmentation documentation
Oct 28 2020, 10:41 AM
kislinsk closed T27908: [MITKDoc] Update Multilabel Segmentation documentation regarding label presets as Resolved by committing rMITK7e02155bc8ba: Add section about label set presets to multilabel segmentation documentation.
Oct 28 2020, 10:40 AM · Cleared, MITK (v2021.02)
kislinsk edited the content of Merging into master Branch.
Oct 28 2020, 7:50 AM
kislinsk closed T27663: Crosshair navigation not disabled in QmitkMeasurementView as Wontfix.

I see. The only implication however is that one is able to scroll through the slices while placing a planar figure while placing control points on different slices is prevented, so I would say this is more like a feature than a bug, as one can look up neighboring slices during placement to support the decision where to exactly place points.

Oct 28 2020, 7:05 AM · Breaking Change, MITK
kislinsk added a comment to T27908: [MITKDoc] Update Multilabel Segmentation documentation regarding label presets.

Pushed new branch bugfix/T27908-UpdateMultilabelSegmentationDoc.

Oct 28 2020, 6:59 AM · Cleared, MITK (v2021.02)
kislinsk closed T27844: CDash links to commits in phabricator seems not to work correctly as Resolved.

As the devs of CDash prefer to stay dead silent about this feature both in the issue linked above and on the mailing list, I think we can make an educated guess that it is not implemented.

Oct 28 2020, 6:56 AM · Restricted Project, Restricted Project, MITK
kislinsk added a revision to T27908: [MITKDoc] Update Multilabel Segmentation documentation regarding label presets: Unknown Object (Differential Revision).
Oct 28 2020, 6:52 AM · Cleared, MITK (v2021.02)

Oct 27 2020

floca added a comment to T27605: Stitching functionality.

Deleted branch feature/T27605-Stitching_filter.

Oct 27 2020, 8:59 AM · Noteworthy, MITK

Oct 26 2020

floca closed T27210: Stitching tool for images as Resolved.

Solved by T27605

Oct 26 2020, 8:41 PM · Restricted Project, Restricted Project
t006d moved T27917: Small 2 Minute Presentation about my work from Backlog to AuxiliaryStuff on the Tassilo Wald board.
Oct 26 2020, 5:26 PM · Tassilo Wald
t006d set the color for Tassilo Wald to Grey.
Oct 26 2020, 5:25 PM
t006d changed the edit policy for T27917: Small 2 Minute Presentation about my work.
Oct 26 2020, 5:25 PM · Tassilo Wald
t006d created T27917: Small 2 Minute Presentation about my work.
Oct 26 2020, 5:23 PM · Tassilo Wald
kislinsk closed T27914: Transform relative MITK extension dirs to absolute dirs as Resolved.
Oct 26 2020, 4:52 PM · MITK
kislinsk added a comment to T27914: Transform relative MITK extension dirs to absolute dirs.

Deleted branch bugfix/T27914-AbsoluteMITKExtensionDirs.

Oct 26 2020, 4:52 PM · MITK
kislinsk committed rMITK659426760b45: Merge branch 'bugfix/T27914-AbsoluteMITKExtensionDirs' into develop (authored by kislinsk).
Merge branch 'bugfix/T27914-AbsoluteMITKExtensionDirs' into develop
Oct 26 2020, 4:51 PM
kislinsk added a comment to T27914: Transform relative MITK extension dirs to absolute dirs.

Pushed new branch bugfix/T27914-AbsoluteMITKExtensionDirs.

Oct 26 2020, 4:49 PM · MITK
kalali added a comment to T27906: Extend "Checkliste Segmentierung – Utilities".

I updated the document and added content to explicitly test

  • utilities / tools / operations on a 3D image
  • combination of 3D images with dynamic segmentation / surface
  • combination of 4D images with static segmentation / surface
  • combination of dynamic and static segmentation
Oct 26 2020, 2:14 PM · MITK (v2022.04), Cleared
reinkea renamed T27915: Podium plot shrinks for long algorithm names from Podium plot is shrinked for long algorithm names to Podium plot shrinks for long algorithm names.
Oct 26 2020, 2:11 PM · challengeR (v1.0)
reinkea created T27915: Podium plot shrinks for long algorithm names.
Oct 26 2020, 2:11 PM · challengeR (v1.0)
kalali updated the task description for T27913: [Segmentation] Warnings in utilities view are inconsistent.
Oct 26 2020, 11:41 AM · MITK (v2024.06)
kislinsk triaged T27914: Transform relative MITK extension dirs to absolute dirs as Unbreak Now! priority.
Oct 26 2020, 11:24 AM · MITK
kalali reopened T17656: ProgressBar for morphological operations as "Open".

I just stumbled upon this while testing the utilities with 4D data. Depending on the number of timesteps and the complexity of the operation the selected operation might take a while (you ca actually see the progress in the console output).
This should be discussed as I do not see any

whole new segmentation functionality this year

Oct 26 2020, 11:21 AM · Auto-closed, Request for Discussion, MITK, Bugzilla
kalali triaged T27913: [Segmentation] Warnings in utilities view are inconsistent as Normal priority.
Oct 26 2020, 11:07 AM · MITK (v2024.06)
kislinsk added a comment to T27910: 2020 Week 43 (Late October).

Deleted branch release/T27910-2020-Week-43.

Oct 26 2020, 11:06 AM · MITK

Oct 23 2020

floca added a parent task for T26953: DICOM SEG - Cannot rewrite segmentations as DICOM SEG: T27178: MITK - DICOM Seg - loaded DCM SEG not associated with referenced DCM .
Oct 23 2020, 6:54 PM · Moved to git.dkfz.de, MITK (v2024.12), Cleared
floca added a subtask for T27178: MITK - DICOM Seg - loaded DCM SEG not associated with referenced DCM : T26953: DICOM SEG - Cannot rewrite segmentations as DICOM SEG.
Oct 23 2020, 6:54 PM · Auto-closed, Missing Info, MITK
floca edited projects for T27178: MITK - DICOM Seg - loaded DCM SEG not associated with referenced DCM , added: Missing Info; removed Request for Discussion.

Removed request for discussion. Nothing to discuss now:
Problem 1: We would neet more information about the specific use case /user story as it should be handled by a dedicated UI/DataStorageInspector (for the SelectionDialog e.g. in the Segmentation Flow)

Oct 23 2020, 6:53 PM · Auto-closed, Missing Info, MITK
kislinsk closed T27910: 2020 Week 43 (Late October) as Resolved.
Oct 23 2020, 5:22 PM · MITK
kislinsk committed rMITK701c8286244c: Merge branch 'master' into develop (authored by kislinsk).
Merge branch 'master' into develop
Oct 23 2020, 5:15 PM
kislinsk committed rMITKf09362ceac6d: 2020 Week 43 (Late October) (authored by kislinsk).
2020 Week 43 (Late October)
Oct 23 2020, 5:14 PM
kislinsk edited the content of Changelog.
Oct 23 2020, 4:57 PM · MITK
kislinsk edited the content of 2020 Week 43 (Late October).
Oct 23 2020, 4:57 PM