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Tue, Jun 30

Oshio added a comment to T27389: Running tutorial's Step8 gives Segmentation Fault!.

A couple of days after writing that, I found the code that is setting the initial state to visible.

Tue, Jun 30, 8:31 PM · MITK (2018-04)
kalali added a comment to T27389: Running tutorial's Step8 gives Segmentation Fault!.

@kalali Your solution solved the problem. I'd like to point out that SetWidgetPlanesVisibility(true) is already called somewhere inside InitializeMultiWidget(), so just AddPlanesToDataStorage()is enough for rendering the planes.

Tue, Jun 30, 9:41 AM · MITK (2018-04)

Sat, Jun 20

kalali added a comment to T27389: Running tutorial's Step8 gives Segmentation Fault!.

Thank you for your response and for pointing out the redundancy, I will fix this next week.

Sat, Jun 20, 9:53 AM · MITK (2018-04)
Oshio added a comment to T27389: Running tutorial's Step8 gives Segmentation Fault!.

@kalali Your solution solved the problem. I'd like to point out that SetWidgetPlanesVisibility(true) is already called somewhere inside InitializeMultiWidget(), so just AddPlanesToDataStorage()is enough for rendering the planes.

Sat, Jun 20, 6:12 AM · MITK (2018-04)

Fri, Jun 19

kalali closed T27389: Running tutorial's Step8 gives Segmentation Fault! as Resolved.

I fixed the tutorial accordingly and close this task as resolved. If you still have problems, don't hesitate to reopen this task.

Fri, Jun 19, 2:58 PM · MITK (2018-04)

Tue, Jun 16

kalali claimed T27389: Running tutorial's Step8 gives Segmentation Fault!.

I can reproduce the error. There was a change in the StdMultiWidget so we have to adapt the tutorial. A specific initialization-method was added, so we need to call InitializeMultiWidget before accessing the render windows (which does some things for us so we can remove some lines from the tutorial).
The level window slider was removed from the StdMultiWidget and needs to be added additionally.

Tue, Jun 16, 1:23 PM · MITK (2018-04)

May 11 2020

Oshio edited projects for T27389: Running tutorial's Step8 gives Segmentation Fault!, added: MITK (2018-04); removed MITK.
May 11 2020, 7:53 PM · MITK (2018-04)

Jan 9 2020

gaoh placed T24398: Dicom plugin: wdb Retrieve does not work up for grabs.

This issue is not wDB related, but MITK related:
Query with CGET activated and then Retrieve:
Retrieve does not work, MTIK directly shows:

Jan 9 2020, 10:05 AM · MITK

Jan 8 2020

gaoh reopened T24398: Dicom plugin: wdb Retrieve does not work as "Open".

This does still not work (Retrieve from wdB fails, when going throw the "Checkliste DICOM Browser".
I have to look into this.

Jan 8 2020, 11:45 AM · MITK

Jun 11 2019

full created T26397: Multilabel Segmentation fil ecannot be converted to multilabel segmentation in MITK.
Jun 11 2019, 8:13 PM · MITK

Apr 15 2019

hettich added a comment to T24948: MITK doesn't build with gcc 8.

You mean like

-Wno-error=catch-value=
Apr 15 2019, 8:29 PM · MITK (2018-04)

Apr 9 2019

eisenman closed T24778: OpenIGTlink does not build in superbuild [Ubuntu 18.04], a subtask of T24786: Test MITK v2018.04 with Ubuntu 18.04, as Resolved.
Apr 9 2019, 5:06 PM · MITK (2018-04)

Mar 11 2019

kislinsk archived MITK (2018-04).
Mar 11 2019, 9:34 AM
kislinsk closed T24498: Update MITK Wikipedia page as Resolved.
Mar 11 2019, 9:34 AM · MITK (2018-04)
kislinsk closed T25619: Remaining Todos for MITK v2018.04 as Resolved.
Mar 11 2019, 9:33 AM · MITK (2018-04)

Feb 5 2019

floca created T25988: LabelSetImageIO should support time geometries and property serialization.
Feb 5 2019, 11:02 AM · MITK (2020)
full added a comment to T25939: DICOM data and Nifti Segmentation don't like each other, 3d+t data.

Alright, thanks for your support!

Feb 5 2019, 10:50 AM · MITK
floca added a comment to T25939: DICOM data and Nifti Segmentation don't like each other, 3d+t data.

Thanks for that. The problem arises from a insufficient implementation of the LabelSetImagIO. It currently ignores the time geometry and additional properties :(.

Feb 5 2019, 10:48 AM · MITK

Jan 29 2019

full added a comment to T25939: DICOM data and Nifti Segmentation don't like each other, 3d+t data.

Sorry I did not mention this, but I use the multi label segmentation.

Jan 29 2019, 4:05 PM · MITK
floca added a comment to T25939: DICOM data and Nifti Segmentation don't like each other, 3d+t data.
In T25939#173903, @full wrote:

For the sake of completeness: I did as you suggested and created a segmentation from scratch and exporting it as nrrd. This did not solve the problem.

Then there might be another bug involved. Could you make such a segmentaton (must not be a meaningfull) store it as nrrd and provide the stored NRRD?

Jan 29 2019, 4:02 PM · MITK
full added a comment to T25939: DICOM data and Nifti Segmentation don't like each other, 3d+t data.

Thank you for your extensive response.

Jan 29 2019, 3:59 PM · MITK
floca added a comment to T25939: DICOM data and Nifti Segmentation don't like each other, 3d+t data.

The reason is (most certainly, but not verified!), that the nifti segmentations do not store correct timepoints for each frame. If loaded, they will get the default time geometry. (starting with 0 ms and a duration of 1 ms per frame). This is one of the problems I addressed last december with my camic info mail, to make people aware of current problems with using nifti (cf nrrd format) when storing data.

Jan 29 2019, 3:12 PM · MITK
full created T25939: DICOM data and Nifti Segmentation don't like each other, 3d+t data.
Jan 29 2019, 11:58 AM · MITK

Jan 8 2019

kislinsk reassigned T25619: Remaining Todos for MITK v2018.04 from kislinsk to nolden.
Jan 8 2019, 11:25 AM · MITK (2018-04)

Dec 18 2018

neher closed T24705: [MITK Diffusion] MITK Diffusion crashes on close as Invalid.
Dec 18 2018, 7:49 AM · MITK (2018-04)

Dec 17 2018

hentsch placed T24498: Update MITK Wikipedia page up for grabs.
Dec 17 2018, 4:17 PM · MITK (2018-04)

Dec 3 2018

kislinsk closed T24333: Noteworthy new features since MITK 2016.11 as Resolved.
Dec 3 2018, 3:41 PM · MITK (2018-04)
kislinsk closed T24552: Write migration guide as Resolved.
Dec 3 2018, 3:41 PM · MITK (2018-04)
kislinsk updated the task description for T25619: Remaining Todos for MITK v2018.04.
Dec 3 2018, 3:40 PM · MITK (2018-04)
kislinsk updated the task description for T25619: Remaining Todos for MITK v2018.04.
Dec 3 2018, 2:36 PM · MITK (2018-04)

Nov 23 2018

hentsch added a comment to T25619: Remaining Todos for MITK v2018.04.

The tutorial ("Welcome screen") has light theme and the old icons. This might be quite confusing for new users.

Nov 23 2018, 10:52 AM · MITK (2018-04)
hentsch claimed T24498: Update MITK Wikipedia page.
Nov 23 2018, 10:50 AM · MITK (2018-04)

Nov 21 2018

kislinsk updated the task description for T25619: Remaining Todos for MITK v2018.04.
Nov 21 2018, 10:42 AM · MITK (2018-04)

Nov 20 2018

hentsch added a comment to T24333: Noteworthy new features since MITK 2016.11.

warnings as errors on by default: New CMake option WARNINGS_NO_ERRORS

Nov 20 2018, 1:50 PM · MITK (2018-04)

Nov 15 2018

kislinsk updated the task description for T25619: Remaining Todos for MITK v2018.04.
Nov 15 2018, 10:27 AM · MITK (2018-04)

Nov 13 2018

kislinsk updated the task description for T25619: Remaining Todos for MITK v2018.04.
Nov 13 2018, 1:49 PM · MITK (2018-04)
kislinsk updated the task description for T25619: Remaining Todos for MITK v2018.04.
Nov 13 2018, 12:46 PM · MITK (2018-04)
floca added a comment to T24553: Write and communicate release strategy (alpha, beta, ...).

Is this really already resolved?

Nov 13 2018, 11:52 AM · MITK (2018-04)
kislinsk updated the task description for T25619: Remaining Todos for MITK v2018.04.
Nov 13 2018, 11:20 AM · MITK (2018-04)
kislinsk closed T24553: Write and communicate release strategy (alpha, beta, ...) as Resolved.
Nov 13 2018, 11:19 AM · MITK (2018-04)
kislinsk closed T25191: v2018.04-beta as Resolved.
Nov 13 2018, 11:19 AM · MITK (2018-04)
kislinsk closed T25186: Set version information as Resolved.
Nov 13 2018, 11:18 AM · MITK (2018-04)
kislinsk added a comment to T25186: Set version information.

Pushed new branch T25186-version-number-update.

Nov 13 2018, 11:15 AM · MITK (2018-04)
tsvetkov added a comment to T25191: v2018.04-beta.

Pushed new branch T25191-v2018.04-beta-DICOMBrowser-ListRequests.

Nov 13 2018, 10:24 AM · MITK (2018-04)

Nov 9 2018

kislinsk updated the task description for T25619: Remaining Todos for MITK v2018.04.
Nov 9 2018, 2:22 PM · MITK (2018-04)
kislinsk closed T24755: 2D Fast Marching Segmentation Tool doesn't work as Resolved.
Nov 9 2018, 12:59 PM · MITK (2018-04)
tsvetkov added a comment to T25619: Remaining Todos for MITK v2018.04.

Known Issues:
Under Linux after compiling i have to start the program twice, the first time with --BlueBerry.clean. I use this script to compile and start it faster:
#!/bin/bash

Nov 9 2018, 11:52 AM · MITK (2018-04)
tsvetkov added a comment to T25191: v2018.04-beta.

Pushed new branch T25191-v2018.04-beta-FastMargin.

Nov 9 2018, 11:02 AM · MITK (2018-04)
kislinsk updated the task description for T25619: Remaining Todos for MITK v2018.04.
Nov 9 2018, 10:54 AM · MITK (2018-04)
kislinsk closed T24951: mitkGIFVolumetricDensityStatisticsTest fails randomly as Resolved.

rMITKbd5795bba880: Fix out of range index

Nov 9 2018, 10:33 AM · MITK (2018-04)