I set the priority to high because we defined that having appropriate data at a reachable location is one of the most pressing issues when it comes to manual GUI tests.
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Apr 22 2021
Apr 22 2021
kalali moved T26989: [Checklist] GUI test data originates from different sources from Tests/Checklists to Cycle on the MITK (v2021.10) board.
kalali raised the priority of T26989: [Checklist] GUI test data originates from different sources from Normal to High.
kalali added a parent task for T26989: [Checklist] GUI test data originates from different sources: Unknown Object (Maniphest Task).
kalali moved T26989: [Checklist] GUI test data originates from different sources from Backlog to Tests/Checklists on the MITK (v2021.10) board.
kalali edited projects for T26989: [Checklist] GUI test data originates from different sources, added: MITK (v2021.10); removed Request for Discussion, MITK.
Added tests for value comparison
Can this also be matched with this other task I created?
Added .arcconfig
• kleina committed rOBSHYPPOPYace9c97f5ba3: Fixed MPISolverWrapper's direct call of blackbox internal (authored by • kleina).
Fixed MPISolverWrapper's direct call of blackbox internal
Changes are pushed into the new branch T28353-cmake_faq branch.
Pushed new branch to rMITK MITK: feature/T28354-cmake_faq.
Apr 21 2021
Apr 21 2021
In T27437#223241, @al-sabr wrote:Is this task finished or if not when is it planned?
Pushed new branch to rMITK MITK: feature/T27437-ITK-v5.1.
• kleina reopened T28410: MPISolverWrapper's direct call of blackbox internal seems wrong as "Open".
• kleina committed rOBSHYPPOPY727320895a4e: Removed deprecated loss_function_batch_call (authored by • kleina).
Removed deprecated loss_function_batch_call
• kleina committed rOBSHYPPOPY543bba87253a: Make sure fallback only gets executed when batch_call fails. (authored by • kleina).
Make sure fallback only gets executed when batch_call fails.
• kleina committed rOBSHYPPOPYa2cfa7ce75ac: Fixed MPISolverWrapper's direct call of blackbox internal (authored by • kleina).
Fixed MPISolverWrapper's direct call of blackbox internal
• kleina added a project to T28300: [MPI] MPI as a general dependency might be problematic: Request for Discussion.
• kleina moved T28376: Blackbox class - reorder the loss function call try from In Progress to Done on the Hyppopy board.
• kleina moved T28298: Check for all print outputs in code base and convert them to log messages from In Progress to Done on the Hyppopy board.
• kleina closed T28376: Blackbox class - reorder the loss function call try as Resolved by committing rOBSHYPPOPY5f8b57e426c0: Reordered the loss function call try..
• kleina committed rOBSHYPPOPY5f8b57e426c0: Reordered the loss function call try. (authored by • kleina).
Reordered the loss function call try.
• kleina added a revision to T28376: Blackbox class - reorder the loss function call try: Unknown Object (Differential Revision).
• kleina committed rOBSHYPPOPYe704bebf3217: Reordered the loss function call try. (authored by • kleina).
Reordered the loss function call try.
• kleina removed a project from T28376: Blackbox class - reorder the loss function call try: Request for Discussion.
• kleina moved T28410: MPISolverWrapper's direct call of blackbox internal seems wrong from In Progress to Done on the Hyppopy board.
• kleina added a revision to T28410: MPISolverWrapper's direct call of blackbox internal seems wrong: Unknown Object (Differential Revision).
• kleina committed rOBSHYPPOPY19e487728222: Converted "print" outputs to "log" outputs. (authored by • kleina).
Converted "print" outputs to "log" outputs.
Thanks
• kleina moved T28410: MPISolverWrapper's direct call of blackbox internal seems wrong from Done to In Progress on the Hyppopy board.
Your argument makes sense to me. I did not have a specific order in mind when implementing it, so I do not have any counterargument here.
• kleina moved T28376: Blackbox class - reorder the loss function call try from Backlog to In Progress on the Hyppopy board.
Changed blackbox call.
• kleina committed rOBSHYPPOPY8c13e7810091: Converted "print" outputs to "log" outputs. (authored by • kleina).
Converted "print" outputs to "log" outputs.
• kleina moved T28455: RT struct 3D visibility is not working correctly from Backlog to Cycle on the MITK (v2021.10) board.
• kleina edited projects for T28455: RT struct 3D visibility is not working correctly, added: MITK (v2021.10); removed MITK.
Is this task finished or if not when is it planned?
• kleina added a revision to T28298: Check for all print outputs in code base and convert them to log messages: Unknown Object (Differential Revision).
• kleina reopened T28410: MPISolverWrapper's direct call of blackbox internal seems wrong as "Open".
Forgot something and didn't request review correctly. I will open this one agian.
kislinsk closed T28446: Migrate MatchPoint to ITK v5.1, a subtask of T27437: Migrate MITK to use ITK 5.x , as Resolved.
Apr 20 2021
Apr 20 2021
• kleina committed rOBSHYPPOPYf1c392fea782: Converted "print" outputs to "log" outputs. (authored by • kleina).
Converted "print" outputs to "log" outputs.
kislinsk committed rMP3e771a0f9115: Replace more itk::ImageIOBase enums with itk::IO...Enum enums (authored by kislinsk).
Replace more itk::ImageIOBase enums with itk::IO...Enum enums
kislinsk committed rMPf7699d1ec6c8: Migrate TransformCategoryType to TransformCategoryEnum (authored by kislinsk).
Migrate TransformCategoryType to TransformCategoryEnum
Apr 19 2021
Apr 19 2021
• kleina moved T28332: Support cascaded MPI processing from In Progress to Testing/Evaluations on the Hyppopy board.
Apr 17 2021
Apr 17 2021
Actualized sha1 check sum for litmus
Fixed itk v5 changes in the Elastix wrapper.
floca committed rMP43a30f4ce161: Incread version as ITK v5+ is now a hard requirement and breaking change (authored by floca).
Incread version as ITK v5+ is now a hard requirement and breaking change
Fixed identity mapper test
Updated Litmus code to work with itk v5
Fixed broken tests
floca committed rMP09b0bbac10cf: To ease the migration to v5 the deprecated itk class (authored by floca).
To ease the migration to v5 the deprecated itk class
Fixed broken code due to the switch to itk v5
floca committed rMPc8b9c21272a5: Added diagnostic output in case of failing tests (authored by floca).
Added diagnostic output in case of failing tests
Apr 15 2021
Apr 15 2021
• kleina committed rOBSHYPPOPYa340b927d14a: * Added alternative loss_function draft, that does not use a callback function. (authored by • kleina).
* Added alternative loss_function draft, that does not use a callback function.
I updated the draft in the branch directly (same file).
• kleina moved T28332: Support cascaded MPI processing from Backlog to In Progress on the Hyppopy board.
• thomass committed rRTTB377303e52d4f: include different sampling strategy based on absolute mm (authored by • thomass).
include different sampling strategy based on absolute mm
kahl moved T28437: 3D region growing may have issues when the seed point is on a pixel with value 0 from Segmentation to Cycle on the MITK (v2021.10) board.
Apr 14 2021
Apr 14 2021
Do more mutex fixes
kislinsk committed rMP7da4216a857d: MappingTaskBatch needs a more thorough migration (authored by kislinsk).
MappingTaskBatch needs a more thorough migration
kislinsk committed rMP110d8364c3b5: Fix more NULL smart pointer initializations (authored by kislinsk).
Fix more NULL smart pointer initializations
Do more enum replacements
Adapt threading-related API to ITK v5
kislinsk committed rMPad4619bd536d: [DOUBLE-CHECK THIS COMMIT] Migrate spatial objects (authored by kislinsk).
[DOUBLE-CHECK THIS COMMIT] Migrate spatial objects
kislinsk committed rMP255e513cf781: Replace unsigned long return type of GetMTime() with itk::ModifiedTimeType (authored by kislinsk).
Replace unsigned long return type of GetMTime() with itk::ModifiedTimeType
Replace itksys::String with std::string
kislinsk committed rMP0837e06d97ff: Replace vcl_ math functions with std:: math functions (authored by kislinsk).
Replace vcl_ math functions with std:: math functions
kislinsk committed rMP1a3628a9c04b: Replace ITK smart pointer NULL initialization with (implicit) nullptr… (authored by kislinsk).
Replace ITK smart pointer NULL initialization with (implicit) nullptr…
kislinsk committed rMPc733cb3de98f: Replace itk::ImageIOBase enums with itk::IO...Enum enums (authored by kislinsk).
Replace itk::ImageIOBase enums with itk::IO...Enum enums
kislinsk committed rMPeb6be9df7d3f: Replace itk::LoggerBase::PriorityLevelType with itk::LoggerBaseEnums… (authored by kislinsk).
Replace itk::LoggerBase::PriorityLevelType with itk::LoggerBaseEnums…
Replace ITK mutexes with std mutexes
a178n edited projects for T28354: Update MITK documentation on CMAKE build for plugins, added: MITK (v2021.10), Next Milestone; removed Missing Info, Restricted Project.
Unassign myself because we removed the clipping plane from the release and have not discussed yet how to further proceed.
• thomass updated subscribers of T28406: [Segmentation] Examine Live-wire tool for different costfunctions/behavior.
The first user feedback of the patch above was positive, the users liked the behavior.
However, the patch did not work correctly in terms of modifying the points afterwards (users were warned before).
floca moved T28446: Migrate MatchPoint to ITK v5.1 from Backlog to Cycle on the MITK (v2021.10) board.
@kislinsk thanks for taking over. The WIP stuff I put on github still could be useful, see comment above. let me know if I can help.