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kleina (André Klein)
SIDT apprentice

Projects (8)

User Details

User Since
Aug 1 2016, 12:10 PM (146 w, 3 d)

Recent Activity

Tue, May 14

kleina added a comment to T26276: Segmentation created for multiple timepoints on 3D+t images.

Ok, I tested it on my current developing build, which is branched off of master from 2019-04-29 (a0ba9d263118bc2df2aa922c124c3db57acbd2dc). I can reproduce the error as described in the description. So I guess to answer your question @kislinsk: The status is "still open".

Tue, May 14, 10:39 AM · MITK (2018-04-4)

Mon, May 13

kleina added a comment to T26276: Segmentation created for multiple timepoints on 3D+t images.

I forgot to enable the segmentation plugin... I'll test it tomorrow.

Mon, May 13, 4:49 PM · MITK (2018-04-4)
kleina added a comment to T26276: Segmentation created for multiple timepoints on 3D+t images.

I can reproduce it. I did exactly the steps in the task description. I used MITK.2018.4.0 installer. I#ll check on a (more or less) current master.

Mon, May 13, 4:33 PM · MITK (2018-04-4)
kleina added a comment to T26276: Segmentation created for multiple timepoints on 3D+t images.

Wait for it...

Mon, May 13, 4:30 PM · MITK (2018-04-4)

Thu, May 9

kleina updated kleina.
Thu, May 9, 11:24 AM

Tue, May 7

kleina committed rMITK9680b016958e: removed trained net from qrc (authored by kleina).
removed trained net from qrc
Tue, May 7, 4:44 PM
kleina committed rMITKf885a64b28f2: The trained net can now be loaded via a dialog. (authored by kleina).
The trained net can now be loaded via a dialog.
Tue, May 7, 4:35 PM
kleina committed rMITKfea1ce69c335: updated icon now dealing with image sizes that are not a power of 2 (authored by kleina).
updated icon now dealing with image sizes that are not a power of 2
Tue, May 7, 3:55 PM
kleina committed rMITK9dab7ee2f261: resize image, if # of slices not devidable by batch_size (authored by kleina).
resize image, if # of slices not devidable by batch_size
Tue, May 7, 1:57 PM

Mon, May 6

kleina committed rMITK904aac229739: Updated some log messages. (authored by kleina).
Updated some log messages.
Mon, May 6, 3:13 PM
kleina committed rMITKd139633e4e83: Some code cleanup and const string definition (authored by kleina).
Some code cleanup and const string definition
Mon, May 6, 1:54 PM
kleina committed rMITK89e2fa29e259: add predicate helper for image selection (authored by kleina).
add predicate helper for image selection
Mon, May 6, 11:34 AM
kleina committed rMITKa15c317c423a: Changed selection to comboBox way... (authored by kleina).
Changed selection to comboBox way...
Mon, May 6, 11:24 AM

Fri, May 3

kleina committed rMITK375aecbac54e: Minor changes. (authored by kleina).
Minor changes.
Fri, May 3, 6:42 PM
kleina committed rMITK8dc831bd480d: Added python script to resources (authored by kleina).
Added python script to resources
Fri, May 3, 5:16 PM

Thu, May 2

kleina committed rMITK5947066faddd: Bone segmantation using CNN in MITK. First try... (authored by kleina).
Bone segmantation using CNN in MITK. First try...
Thu, May 2, 1:27 PM

Feb 1 2019

kleina added a member for Deep Learning: ramien.
Feb 1 2019, 1:52 PM
kleina added a member for Deep Learning: menjivar.
Feb 1 2019, 10:14 AM

Jan 18 2019

kleina committed rMITKadf2b5400f7a: Merge branch 'T25683-chart_example_linux' (authored by kleina).
Merge branch 'T25683-chart_example_linux'
Jan 18 2019, 2:28 PM
kleina committed rMITKf8505f3ec679: ignore unused parameter (authored by kleina).
ignore unused parameter
Jan 18 2019, 2:26 PM
kleina added a comment to T25683: Chart Example Plugin.

Pushed new branch T25683-chart_example_linux.

Jan 18 2019, 2:26 PM · MITK
kleina added members for Deep Learning: k656s, aguilera.
Jan 18 2019, 12:00 PM

Jan 17 2019

kleina triaged T25853: Auto-start does not work with visdom version 0.1.8.8 as Normal priority.
Jan 17 2019, 1:39 PM · trixi

Dec 21 2018

kleina committed rMITK85f003cc383e: Merge branch 'T22414-codeAnalysisCppcheck201812' (authored by kleina).
Merge branch 'T22414-codeAnalysisCppcheck201812'
Dec 21 2018, 3:25 PM
kleina committed rMITKdceebea28ff8: Changes initialization order in constructor to prevent warnings. (authored by kleina).
Changes initialization order in constructor to prevent warnings.
Dec 21 2018, 3:24 PM
kleina committed rMITK5dcd452ff034: added plugin for bone seg (authored by kleina).
added plugin for bone seg
Dec 21 2018, 2:50 PM

Nov 27 2018

kleina added a comment to T25683: Chart Example Plugin.

Nice!

Nov 27 2018, 10:35 AM · MITK

Nov 26 2018

kleina triaged T25683: Chart Example Plugin as Normal priority.
Nov 26 2018, 1:43 PM · MITK

Nov 23 2018

kleina added a member for Deep Learning: greinerm.
Nov 23 2018, 10:38 AM

Nov 20 2018

kleina added a comment to T25437: Evaluate to switch from C3.js to Plotly.js.

Nov 20 2018, 11:50 AM · Noteworthy, Restricted Project, MITK
kleina added a comment to T25437: Evaluate to switch from C3.js to Plotly.js.

I do not think, that the subchart feature is a blocker or even critical. It was very easy to implement with C3 and I personally liked the idea as described above. I assume there is something to achieve that in plotly as well? I'd be happy to discuss this with you in person.

Nov 20 2018, 11:41 AM · Noteworthy, Restricted Project, MITK

Nov 19 2018

kleina added a comment to T25437: Evaluate to switch from C3.js to Plotly.js.

The idea behind that feature was, that it should be obvious to the user, that he is only looking at a part of the data. A zoomed view can lead to misinterpretation if the user is not aware of it. At least that is what I thought when I added that feature.

Nov 19 2018, 4:27 PM · Noteworthy, Restricted Project, MITK

Oct 23 2018

kleina triaged T25555: Use Comma as delimiter when copying to clipboard as Low priority.
Oct 23 2018, 4:28 PM · MITK

Sep 14 2018

kleina added a comment to T23104: Deprecate QmitkPlotWidget.

I created a subtask. We'll look into this.

Sep 14 2018, 2:50 PM · Restricted Project, MITK
kleina triaged T25437: Evaluate to switch from C3.js to Plotly.js as Normal priority.
Sep 14 2018, 2:50 PM · Noteworthy, Restricted Project, MITK
kleina added a comment to T23104: Deprecate QmitkPlotWidget.

We just took a look at plotly.js. In contrast to C3, it supports error-bars and is still under development (see guithub stats).
To use plotly.js with MITK chart we think, that no fundamental changes on C++ side are necessary. Just the JS stuff needs to be rewritten.

Sep 14 2018, 1:40 PM · Restricted Project, MITK

Jul 6 2018

kleina added a member for Deep Learning: adler.
Jul 6 2018, 11:26 AM

Jun 26 2018

kleina moved T24972: Protocol Medical Decathlon Milestone 2 Meeting from Restricted Project Column to Restricted Project Column on the Restricted Project board.
Jun 26 2018, 11:22 AM · Restricted Project

Jun 25 2018

kleina updated the task description for T24972: Protocol Medical Decathlon Milestone 2 Meeting.
Jun 25 2018, 3:35 PM · Restricted Project
kleina created T24972: Protocol Medical Decathlon Milestone 2 Meeting.
Jun 25 2018, 3:21 PM · Restricted Project

Apr 27 2018

kleina committed rMITKd2e319c74ab5: added QmitkStatisticsFilterProxyModel to be able to filter table and show/hide… (authored by kleina).
added QmitkStatisticsFilterProxyModel to be able to filter table and show/hide…
Apr 27 2018, 3:38 PM

Apr 13 2018

kleina committed rMITK73d5d26292e1: fix merge (authored by kleina).
fix merge
Apr 13 2018, 3:22 PM
kleina committed rMITK62b194e31457: Merge branch 'T24182-newImageStatisticsPlugin' of https://phabricator.mitk. (authored by kleina).
Merge branch 'T24182-newImageStatisticsPlugin' of https://phabricator.mitk.
Apr 13 2018, 3:03 PM
kleina committed rMITKf7b12336b525: Merge branch 'T24639-linux-build-errors' into T24182-newImageStatisticsPlugin (authored by kleina).
Merge branch 'T24639-linux-build-errors' into T24182-newImageStatisticsPlugin
Apr 13 2018, 3:03 PM
kleina committed rMITK27a272fb205f: Fixed some warning for gcc (authored by kleina).
Fixed some warning for gcc
Apr 13 2018, 11:55 AM
kleina triaged T24415: Qt Updates for the install video as Low priority.
Apr 13 2018, 9:17 AM · Restricted Project, MITK

Mar 22 2018

kleina accepted rMITKe026d9035698: Resolved T23466 added chart type parameter als data property.
Mar 22 2018, 2:11 PM
kleina added a comment to T24435: Segmentation on rotated slices does not work.

Try: E130-Daten\BlackSwan\Patients_for_Registration\0HLXYUL7_0HLXYUL7\16\resources\DICOM

Mar 22 2018, 11:14 AM · MITK (2018-04)

Mar 19 2018

kleina committed rMITK50c25fe4b875: The image statistics can deal with images with multiple time steps now (authored by kleina).
The image statistics can deal with images with multiple time steps now
Mar 19 2018, 10:14 AM

Feb 5 2018

kleina added a comment to T23912: histogram background color in imageStatistics plugin does not change in DarkTheme.

There might also be a Problem when changing the theme. You might have to deselect and reselect the data node. But generally speaking the histogram is available in dark, it works and looks neat.

Feb 5 2018, 9:37 AM · Restricted Project, MITK

Feb 2 2018

kleina triaged T24171: MitkChart should only have set functions as Low priority.
Feb 2 2018, 10:17 AM · Restricted Project, MITK
kleina added a comment to T24155: PluginGenerator: forbid spaces in view name.

see http://docs.mitk.org/nightly/NewPluginPage.html
Spaces are ok, but we should test it one more time.

Feb 2 2018, 9:37 AM · Restricted Project, MITK

Jan 29 2018

kleina added a member for Deep Learning: zhangs.
Jan 29 2018, 10:47 AM

Jan 18 2018

kleina closed T20207: Runtime Error when calculating ImageStatistics on non-closed PlanarFigures as Resolved.

Also works for me. I'll close this task.

Jan 18 2018, 10:21 AM · MITK

Jan 5 2018

kleina added a comment to T23468: Display data points without connecting line in MitkChart.

Instead of hiding the line one could just use a scatter plot... I will look into this next time

Jan 5 2018, 4:11 PM · Restricted Project, MITK
kleina updated subscribers of T23468: Display data points without connecting line in MitkChart.

@vemuri and I integrated the proposal by @laha and @hempe.
The solution needs to be tested with multiple data lines. We tested it within the Image statistics plugin and it worked.

Jan 5 2018, 3:58 PM · Restricted Project, MITK
kleina committed rMITK1f711fe05a4e: add possibility to hide line in MitkChart (authored by kleina).
add possibility to hide line in MitkChart
Jan 5 2018, 3:57 PM
kleina added a comment to T23468: Display data points without connecting line in MitkChart.

Pushed new branch T23468-add-line-style-hidden.

Jan 5 2018, 3:56 PM · Restricted Project, MITK
kleina claimed T23468: Display data points without connecting line in MitkChart.

Yes

Jan 5 2018, 1:28 PM · Restricted Project, MITK
kleina committed rMITK372146d2b334: removed some commented code (authored by kleina).
removed some commented code
Jan 5 2018, 9:30 AM

Dec 22 2017

kleina committed rMITKc0b32049a1aa: tried to fix background issue... made some progress (authored by kleina).
tried to fix background issue... made some progress
Dec 22 2017, 3:34 PM
kleina added a comment to T23912: histogram background color in imageStatistics plugin does not change in DarkTheme.

Pushed new branch T23912-histogram-background-color.

Dec 22 2017, 3:34 PM · Restricted Project, MITK
kleina claimed T23912: histogram background color in imageStatistics plugin does not change in DarkTheme.

We identified the problem.

  • default style in QtStyleManager does not change the preference
  • preference page does not know about the default style
  • preference page clears the QtStylemanager and thus resets to default each time
Dec 22 2017, 3:27 PM · Restricted Project, MITK
kleina moved T22533: rework RTSTRUCT visualization from Bugsquashing - In Progress to Backlog on the MITK board.
Dec 22 2017, 9:42 AM · Restricted Project, MITK
kleina moved T19522: Segmentation not displayed in 3d-render window from Bugsquashing - In Progress to Backlog on the MITK board.
Dec 22 2017, 9:41 AM · MITK, Bugzilla
kleina updated subscribers of T23972: Image statistics view does not work.

Can you explain how to reproduce this? We tried it on a fresh Superbuild of the latest master today and it worked as expected.
@kalali @kahl

Dec 22 2017, 9:36 AM · Restricted Project, MITK

Nov 28 2017

kleina placed T19989: MITK Youtube channel up for grabs.
Nov 28 2017, 2:13 PM · Restricted Project, MITK

Nov 23 2017

kleina added a comment to T23824: [BMC] In dropdown combo boxes you cannot see the full item name.

+1

Nov 23 2017, 2:58 PM · Restricted Project

Nov 2 2017

hentsch awarded T23465: Display Datapoints in LineChart a Dat Boi token.
Nov 2 2017, 10:57 AM · Restricted Project, MITK

Oct 27 2017

kleina raised a concern with rMITKe026d9035698: Resolved T23466 added chart type parameter als data property.
Oct 27 2017, 10:45 AM
kleina added a comment to rMITKe026d9035698: Resolved T23466 added chart type parameter als data property.

Added chart type as a data property.

  • This is needed to be able to display multiple chart types at the same time. (e.g. in MitkDiffusion)
  • Therefore we must get rid of the "global" chart type.
  • Chart type is now passed as a parameter in AddDataXd methods
Oct 27 2017, 10:45 AM
kleina closed T23617: Investigate if QtChart is an alternative to c3js as Resolved.

To bad :-( So I guess we'll stick to C3.js for now.

Oct 27 2017, 9:40 AM · Restricted Project, MITK
kleina closed T23617: Investigate if QtChart is an alternative to c3js, a subtask of T23104: Deprecate QmitkPlotWidget, as Resolved.
Oct 27 2017, 9:40 AM · Restricted Project, MITK

Oct 16 2017

kleina accepted rMITKbaae26819f72: Resolved T23545 - data labels are now stored in QmitkxyData as data property.

Makes sense to me. Labels are now stored as Property in QmitkChartxyData. Therefore the Property mDataLabels of QmitkChartData has been removed.

Oct 16 2017, 10:47 AM

Sep 29 2017

kleina committed rMITK5ca0a164347c: Merge branch 'T23472-areaSplineMitkChart' (authored by kleina).
Merge branch 'T23472-areaSplineMitkChart'
Sep 29 2017, 3:57 PM
kleina closed T23472: Add area-spline to MitkChart, a subtask of T23104: Deprecate QmitkPlotWidget, as Resolved.
Sep 29 2017, 3:57 PM · Restricted Project, MITK
kleina closed T23472: Add area-spline to MitkChart as Resolved by committing rMITK40ac9b45feac: Resolved T23472 added area-spline chart..
Sep 29 2017, 3:57 PM · Restricted Project, MITK
kleina committed rMITK40ac9b45feac: Resolved T23472 added area-spline chart. (authored by kleina).
Resolved T23472 added area-spline chart.
Sep 29 2017, 3:56 PM
kleina added a comment to T23472: Add area-spline to MitkChart.

Pushed new branch T23472-areaSplineMitkChart.

Sep 29 2017, 3:56 PM · Restricted Project, MITK
kleina claimed T23472: Add area-spline to MitkChart.
Sep 29 2017, 3:13 PM · Restricted Project, MITK
kleina created T23472: Add area-spline to MitkChart.
Sep 29 2017, 3:13 PM · Restricted Project, MITK
kleina closed T23467: Add Area-Chart to MitkChart, a subtask of T23104: Deprecate QmitkPlotWidget, as Resolved.
Sep 29 2017, 3:13 PM · Restricted Project, MITK
kleina closed T23467: Add Area-Chart to MitkChart as Resolved.
Sep 29 2017, 3:13 PM · Restricted Project, MITK
kleina committed rMITK03d2fbb4f4e9: Merge branch 'T23467-areaChartMitkChart' (authored by kleina).
Merge branch 'T23467-areaChartMitkChart'
Sep 29 2017, 3:13 PM
kleina committed rMITKbe210ae89374: added area as chart type. (authored by kleina).
added area as chart type.
Sep 29 2017, 3:11 PM
kleina added a comment to T23467: Add Area-Chart to MitkChart.

Pushed new branch T23467-areaChartMitkChart.

Sep 29 2017, 3:10 PM · Restricted Project, MITK
kleina claimed T23467: Add Area-Chart to MitkChart.
Sep 29 2017, 3:09 PM · Restricted Project, MITK
kleina added a parent task for T23414: integrate logarithmic axes in MitkChart: T23104: Deprecate QmitkPlotWidget.
Sep 29 2017, 2:45 PM · MITK
kleina added a subtask for T23104: Deprecate QmitkPlotWidget: T23414: integrate logarithmic axes in MitkChart.
Sep 29 2017, 2:45 PM · Restricted Project, MITK
kleina created T23468: Display data points without connecting line in MitkChart.
Sep 29 2017, 2:44 PM · Restricted Project, MITK
kleina created T23467: Add Area-Chart to MitkChart.
Sep 29 2017, 2:35 PM · Restricted Project, MITK
kleina created T23466: Display multiple Chart Types at the same time.
Sep 29 2017, 2:34 PM · Restricted Project, MITK
kleina created T23465: Display Datapoints in LineChart .
Sep 29 2017, 2:33 PM · Restricted Project, MITK
kleina closed T23463: Change Background color for light theme from white to grey as Resolved.

Done.

Sep 29 2017, 2:11 PM · Restricted Project, MITK
kleina closed T23463: Change Background color for light theme from white to grey, a subtask of T23104: Deprecate QmitkPlotWidget, as Resolved.
Sep 29 2017, 2:11 PM · Restricted Project, MITK
kleina committed rMITK583468ca2f0d: Merge branch 'master' of https://phabricator.mitk.org/source/mitk (authored by kleina).
Merge branch 'master' of https://phabricator.mitk.org/source/mitk
Sep 29 2017, 2:10 PM
kleina committed rMITKd2f3151e5c79: Merge branch 'T23463-change-bg-clolor-for-MitkChart' (authored by kleina).
Merge branch 'T23463-change-bg-clolor-for-MitkChart'
Sep 29 2017, 2:10 PM
kleina committed rMITK851fce02a816: changed bg color to gray (authored by kleina).
changed bg color to gray
Sep 29 2017, 2:07 PM
kleina added a comment to T23463: Change Background color for light theme from white to grey.

Pushed new branch T23463-change-bg-clolor-for-MitkChart.

Sep 29 2017, 2:07 PM · Restricted Project, MITK
kleina created T23463: Change Background color for light theme from white to grey.
Sep 29 2017, 1:53 PM · Restricted Project, MITK