Needs to be reviewed in D175
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Feb 20 2019
Feb 20 2019
Feb 19 2019
Feb 19 2019
That was a very quick finding. Yes, the current implementation only supports stacked area charts. That means, for now the 'stacked data' option should only be selectable if charty type equals area chart.
hentsch closed T26067: Add possibility to add x-data as Resolved by committing rMITKa043041ddaed: Resolved T26067.
hentsch closed T26067: Add possibility to add x-data, a subtask of T25683: Chart Example Plugin, as Resolved.
Pushed new branch T26067-addXData.
Pushed new branch T26058-RingingShift.
• kraeuter edited parent tasks for T26072: Color doesn´t work on anything but Line, added: T23104: Deprecate QmitkPlotWidget; removed: T26071: Title option into global options.
• kraeuter added a subtask for T23104: Deprecate QmitkPlotWidget: T26072: Color doesn´t work on anything but Line.
• kraeuter removed a subtask for T26071: Title option into global options: T26072: Color doesn´t work on anything but Line.
• kraeuter edited parent tasks for T26071: Title option into global options, added: T23104: Deprecate QmitkPlotWidget; removed: T26070: Stacked Data ignores set chart type.
• kraeuter added a subtask for T23104: Deprecate QmitkPlotWidget: T26071: Title option into global options.
• kraeuter removed a subtask for T26070: Stacked Data ignores set chart type: T26071: Title option into global options.
• kraeuter edited parent tasks for T26070: Stacked Data ignores set chart type, added: T23104: Deprecate QmitkPlotWidget; removed: T26069: Logarithmic axis scaling display problems.
• kraeuter added a subtask for T23104: Deprecate QmitkPlotWidget: T26070: Stacked Data ignores set chart type.
• kraeuter removed a subtask for T26069: Logarithmic axis scaling display problems: T26070: Stacked Data ignores set chart type.
floca added a project to T26057: Remove mitkCommandLineParser input and output types: Request for Discussion.
In T23624#175812, @aguilera wrote:Pushed new branch T23624-ConnectionToEpiphanFrameGrabberViaOpenCVIsBuggy.
Feb 18 2019
Feb 18 2019
Also note that the link to the manual from the ModelFit page (which I am assuming is http://mitk.org/wiki/MITK-ModelFit) is currently broken: http://mitk.org/index.php?title=MITK_ModelFit_Manual_2018-07-17.pdf&action=edit&redlink=1
Pushed new branch T26060-MITK-PhotoacousticsBFTool.
kalali added a comment to T24766: Last time step of 3D+t data with arbitrary time geometry not selectable by image navigator spinbox.
Any more ideas on this? I stumbled across this while investigating another DICOM problem.
I found some PET data in XNAT (FS-E Demodata)
Pushed new branch T26057-CommandLineIOtypes.
neher triaged T26056: [MITK Diffusion] Integrated MIC Bet update in MITK Diffusion as Wishlist priority.
I`m trying to understand how everything is calculated and having created 3x3 pixel test images I can calculate the ground truth by hand.
So far no problems, but after calculating I like to check if my numbers and the ones in the GUI are at least somewhat similiar.
Feb 15 2019
Feb 15 2019
Cool! Thanks for taking care for this. I'm looking forward to use the Epiphan grabber directly again (current workaround: PLUS Server and OpenIGTLink). If you need any help please let me know. There also is a nice chat support on the Epiphan page.
milano added a comment to T26002: Unhandled exception in mitkNDITrackingDevice::ThreadStartTracking.
Hi. I completely agree with your comment. I just implemented a handler to avoid a call to terminate() in my application, but the implementation is incomplete. The main problem, as you commented,, is how are we going to let know the main thread that an exception occurred in the tracking thread. There are several possibilities (it would be great to have Qt signals mechanism here), but I think that we have two main options:
Pushed new branch T23624-ConnectionToEpiphanFrameGrabberViaOpenCVIsBuggy.
Thanks for looking into this. Keep in mind that we should still keep the current implementation to grab images as it allows to grab far more than only from the Epiphan frame grabber. Once the feasibility of using the SDK is shown, we should think of integrating it as a separate video source that is dependent on the specific Epiphan SDK.
We digged into the Epiphan SDK and found the V2U_GrabFrame2 structure which is returned by the GrabFrame method. We will try to convert this structure to an mitk Image using also the ITKConvertIplImageBuffer logic. Afterwards, we will try to replace the OpenCV VideoCapture method by using the Epiphan SDK in MITK directly. @aguilera
• steint closed T25859: [chart] implement stacked chart as Resolved by committing rMITKfcc0d997a8c3: Merge branch 'T25859-stacked-area-chart' Fixes T25859..
Pushed new branch T25859-stacked-area-chart.
seitela added a comment to T26002: Unhandled exception in mitkNDITrackingDevice::ThreadStartTracking.
Thanks for this contributions! It seems there are some open issues regarding exception handling in the NDITrackingDevice.
OK, then there is still an error with test 3.
• steint closed T25870: [chart] Implement the chart types spline, area, area_spline and scatter , a subtask of T23104: Deprecate QmitkPlotWidget, as Resolved.
• steint added a comment to T25870: [chart] Implement the chart types spline, area, area_spline and scatter .
Pushed new branch T25870-chart-types.
seitela closed T26001: The return value in mitkSerialCommunication::Send is inconsistent under Microsoft Windows Platforms as Resolved.
Merged pull request as discussed on https://sourceforge.net/p/mitk/mailman/message/36525424/
seitela added a comment to T26001: The return value in mitkSerialCommunication::Send is inconsistent under Microsoft Windows Platforms.
Pushed new branch T26001-Replaced_GetLastError_for_ERROR_VALUE_in_Windows.
Point 1 and 2 are working.
With point 3: not all the series are downloaded: I retrieved all 5 series of a patient, but only got 2 series. Separately retrieving of each series was fine.
• steint closed T25972: Add title to plugin as Resolved by committing rMITKd083ff01727d: Add chart title to example plugin. Fixes T25972..
• steint closed T25972: Add title to plugin, a subtask of T25683: Chart Example Plugin, as Resolved.
Pushed new branch T25972-chart-title.
eisenman added a project to T24754: Volume Visualization crashes with some CT images: Restricted Project.
remove rand from DIffusion module. Use itk mersenne twister for inter platform consistency
Feb 14 2019
Feb 14 2019
Pushed new branch T26046-MultiCompScreenshot.
neher triaged T26046: Screenshot maker should enbale image series of all components as Wishlist priority.
Pushed new branch T26043-FiberfoxTest.
Pushed new branch T25522-MasterIntegrationBranch-14-02-2019.
neher closed T26042: [MITK Diffusion] Fiberfox fox seed should also fix in parameter loading as Resolved.
neher added a comment to T26042: [MITK Diffusion] Fiberfox fox seed should also fix in parameter loading.
Pushed new branch T26042-FiberfoxFixSeed.
neher triaged T26042: [MITK Diffusion] Fiberfox fox seed should also fix in parameter loading as Normal priority.
Feb 13 2019
Feb 13 2019
yes I will try, I already tried Q/R with the current installer and the wdb and it worked.
OsiriX / Horos instance is online:
kalali added a project to T24810: Display interaction synchronization with world coordinates: Restricted Project.
kalali added a project to T24672: Create decoration manager for render windows widgets: Restricted Project.
kalali added a project to T24161: Common interface for Custom-/Std-Multi widget (editor): Restricted Project.
kalali added a project to T24216: Synchronization of individual render windows: camera position: Restricted Project.
hentsch removed a parent task for T25833: Leak/Debugbreak when closing workbench related to MitkChart: Unknown Object (Maniphest Task).
hentsch renamed T25833: Leak/Debugbreak when closing workbench related to MitkChart from Leak/Debugbreak when closing workbench after opening new image statistics plugin to Leak/Debugbreak when closing workbench related to MitkChart.
hentsch lowered the priority of T25833: Leak/Debugbreak when closing workbench related to MitkChart from Normal to Low.
Is not fixed with Qt 5.12.
It does only appear in Debug mode
Also, it also appears without building the image statistics plugin (measurement toolbox). Hence, the problem is probably originated in MitkChart (which uses QWebEngineWidget):
neher closed T26024: [MITK Diffusion] Head motion with volume fraction maps causes holes as Resolved.
Pushed new branch T26031-FiberfoxSpikes.
caused by openmp parallelization
floca moved T22780: Possibility to filter reader services when using IOutils from Restricted Project Column to Restricted Project Column on the Restricted Project board.
floca moved T25704: Difference between GUI and expected values MitkImageStatisticsCalculatorTests from Restricted Project Column to Restricted Project Column on the Restricted Project board.
hentsch closed T25856: [image statistics plugin] Histogram and Line profile are shown together in Caching case as Resolved by committing rMITKce2297c86dfb: resolved T25856.
hentsch added a comment to T25856: [image statistics plugin] Histogram and Line profile are shown together in Caching case.
Pushed new branch T25856-histogramAndLineProfileShown.
Feb 12 2019
Feb 12 2019