VTK 9 upgrade is basically finished already but we also need to upgrade/contribute to ACVD, which needs quite some changes to continue working with VTK. See T27461: Update MITK to use VTK 9.

Jul 5 2020, 10:30 PM

kislinsk added a comment to T27526: 2020 Week 27.

Pushed new branch release/T27526-2020-Week-27.

Jul 5 2020, 9:53 PM · MITK

kislinsk added a comment to T27526: 2020 Week 27.

Jul 5 2020, 9:41 PM · MITK

Jul 3 2020

floca added a comment to T27525: Problems while opening MITK scenes created with 2018.04 release with the current master.

Cannot reproduce the problem with the current develop. Just checked with all example projects. All worked fine T1 and T2 was visible?!?

Jul 3 2020, 5:40 PM · Auto-closed, Missing Info, MITK (v2021.02)

floca added a project to T27525: Problems while opening MITK scenes created with 2018.04 release with the current master: Missing Info.

Jul 3 2020, 5:40 PM · Auto-closed, Missing Info, MITK (v2021.02)

kislinsk updated the task description for T27526: 2020 Week 27.

Jul 3 2020, 4:18 PM · MITK

kislinsk created an object: 2020 Week 27 (Very Early July).

Jul 3 2020, 4:17 PM

kislinsk added a comment to T27526: 2020 Week 27.

Jul 3 2020, 4:15 PM · MITK

kislinsk triaged T27526: 2020 Week 27 as Wishlist priority.

Jul 3 2020, 4:15 PM · MITK

kislinsk added a comment to T27486: Prepare changelog and migration guide for upcoming master merge.

Deleted branch release/T27486-2020-06-19.

Jul 3 2020, 4:13 PM · MITK (v2021.02)

• kleina lowered the priority of T27525: Problems while opening MITK scenes created with 2018.04 release with the current master from High to Normal.

Jul 3 2020, 3:51 PM · Auto-closed, Missing Info, MITK (v2021.02)

• kleina triaged T27525: Problems while opening MITK scenes created with 2018.04 release with the current master as High priority.

Jul 3 2020, 3:51 PM · Auto-closed, Missing Info, MITK (v2021.02)

• kleina added a comment to T26449: XNAT connection failes due to missing OpenSSL connections.

For Qt 5.12.5 it is OpenSSl 1.1.1

Jul 3 2020, 3:36 PM · Noteworthy, MITK (v2021.02)

floca committed rMITKbd7b41ba163a: T27492 Make BooleanOperation time point aware (authored by floca).

T27492 Make BooleanOperation time point aware

Jul 3 2020, 2:26 PM

floca committed rMITK9be590035c77: Add geometry check for segmentations to have more meaningfull error messages. (authored by floca).

Add geometry check for segmentations to have more meaningfull error messages.

Jul 3 2020, 2:26 PM

floca committed rMITK4c37bb3ec974: Fixed error in ContourModelSetToImageFilter::GenerateOutputInformation() that… (authored by floca).

Fixed error in ContourModelSetToImageFilter::GenerateOutputInformation() that…

Jul 3 2020, 2:26 PM

floca committed rMITK90dacf16c124: Make QmitkContourModelToImageWidget time point aware (authored by floca).

Make QmitkContourModelToImageWidget time point aware

Jul 3 2020, 2:26 PM

floca closed T27492: Rework QmitkBooleanOperationsWidget to be time point aware as Resolved by committing rMITK90dacf16c124: Make QmitkContourModelToImageWidget time point aware.

Jul 3 2020, 2:26 PM · MITK (v2021.02)

floca committed rMITKaf1a11693d7d: Make BooleanOperation time point aware (authored by floca).

Make BooleanOperation time point aware

Jul 3 2020, 2:26 PM

• thomass added a comment to T27507: Check the current behavior of the segmentation tools according static and dynamic 4D segmentation.

Plugin name	dynamic timestep =0	dynamic timestep != 0	static t=0	static t =2
Threshold	performs segmentation on all timesteps	performs segmentation on all timesteps	performs segmentation on timestep 0	performs segmentation on timestep 0
UL threshold	performs segmentation on all timesteps	performs segmentation on all timesteps	performs segmentation on timestep 0	performs segmentation on timestep 0
Otsu	performs static 3D seg on the selected timestep + it only matters which time point is selected not on which it was created	see dynamic t = 0	performs segmentation on the timestep selected right before execution	performs segmentation on the timestep selected right before execution
Fast Marching	it doesn't matter on which timesteps the seeds are selected, they all account for initial image / performs segmentation only on the timestep selected, others are blank	see dynamic t=0
Watershed	segmentation cannot be produced with US4DCyl / LinearModel / performs static 3D seg on the selected timestep	see dynamic t=0	performs segmentation on timestep 0	performs segmentation on timestep 2 / it only matters which time point is selected not on which it was created
Picking	Creates a 3D segmentation with picked region and deletes all other segmentations (in all timesteps)

Jul 3 2020, 2:19 PM · MITK (v2021.10), Missing Info, Restricted Project

kalali updated subscribers of T27524: Should RenderingManager be used without singleton?.

Jul 3 2020, 1:00 PM · Request for Discussion, MITK

floca committed rMITK0cee80b3b4a5: T27347 MatchPoint_evaluator_and_manipulator_auto_select (authored by floca).

T27347 MatchPoint_evaluator_and_manipulator_auto_select

Jul 3 2020, 12:37 PM

floca committed rMITK39c72527a228: Fixed T27347 (authored by floca).

Fixed T27347

Jul 3 2020, 12:37 PM

floca closed T27347: [Registration] Evaluator/Mainpulator new autoselect behavior wanted? as Resolved by committing rMITK39c72527a228: Fixed T27347.

Jul 3 2020, 12:37 PM · Cleared, MITK (v2021.02)

floca committed rMITKbd6eeb2d651f: T27517 Seg_crash_on_minimal_time_bounds_greater_0 (authored by floca).

T27517 Seg_crash_on_minimal_time_bounds_greater_0

Jul 3 2020, 12:30 PM

floca committed rMITK3b1040c88c33: Fixed T27517 (authored by floca).

Fixed T27517

Jul 3 2020, 12:30 PM

floca closed T27517: [Segmentation] Seg tools crashes when segmentation starts for images with minimal time bounds > 0 as Resolved by committing rMITK3b1040c88c33: Fixed T27517.

Jul 3 2020, 12:30 PM · MITK (v2021.02)

kalali committed rMITK224dfa5c6e76: Do not explicitly set the visibility of the widget planes (authored by kalali).

Do not explicitly set the visibility of the widget planes

Jul 3 2020, 12:13 PM

kalali committed rMITKbc228c34cd8e: Do not explicitly set the visibility of the widget planes (authored by kalali).

Do not explicitly set the visibility of the widget planes

Jul 3 2020, 12:13 PM

kalali removed a project from T27498: [Selection widgets] Define default for auto selection / listening mechanism: Request for Discussion.

Result of the discussion:
We will "activate auto selection" mode as default. The user has to select a node anyway. Either the selection slot is empty or already contains an automatically selected node. In both cases the user has to manually select a node. But in the latter case there might be a chance that the automatically selected node is the required one.

Jul 3 2020, 11:42 AM · Restricted Project, MITK (v2021.02)

kislinsk created Expert.

Jul 3 2020, 11:25 AM

kislinsk created Advanced.

Jul 3 2020, 11:24 AM

floca triaged T27489: Deprecate and correct QmitkSliceWidget? as Low priority.

Jul 3 2020, 11:12 AM

floca removed a project from T27489: Deprecate and correct QmitkSliceWidget?: MITK (v2021.02).

@nolden: Do you have a clue? Was it missed when cleaning up or is it there on purpose and should be corrected?

Jul 3 2020, 11:10 AM

• thomass claimed T27507: Check the current behavior of the segmentation tools according static and dynamic 4D segmentation.

Jul 3 2020, 11:08 AM · MITK (v2021.10), Missing Info, Restricted Project

kalali triaged T27524: Should RenderingManager be used without singleton? as Normal priority.

Jul 3 2020, 10:37 AM · Request for Discussion, MITK

kislinsk edited the content of Step 0 - Create a Phabricator account.

Jul 3 2020, 10:32 AM · Onboarding

adler added a member for IMSY: • e148c.

Jul 3 2020, 9:59 AM

dmichael added a member for IMSY: • schwadav.

Jul 3 2020, 9:39 AM

koehlerg added a member for MIC: t006d.

Jul 3 2020, 9:23 AM

Jul 2 2020

floca moved T27489: Deprecate and correct QmitkSliceWidget? from Backlog to MITK Meeting on the Request for Discussion board.

Jul 2 2020, 8:59 PM

floca removed a project from T27483: DICOM import of multi-channel data not working: Request for Discussion.

Jul 2 2020, 8:59 PM · MITK (v2021.02), Restricted Project, DICOM

floca updated the task description for T27506: Extend checklists for segmentation view.

Jul 2 2020, 8:53 PM · MITK (v2022.04), Cleared

floca added a revision to T27517: [Segmentation] Seg tools crashes when segmentation starts for images with minimal time bounds > 0: Unknown Object (Differential Revision).

Jul 2 2020, 8:33 PM · MITK (v2021.02)

floca triaged T27517: [Segmentation] Seg tools crashes when segmentation starts for images with minimal time bounds > 0 as High priority.

Jul 2 2020, 8:30 PM · MITK (v2021.02)

floca triaged T27516: [Segmentation] ContourModelSetToImageFilter always use first time step of contour model as Normal priority.

Jul 2 2020, 8:16 PM · Auto-closed, MITK

kahl added a comment to T26973: [Segmentation] RegionGrowing3D preview only in 3D Widget.

I couldn't reproduce it myself and to be honest, I don't know which picture I took when the bug occured. @thomass Do you still know more about this bug? I think we encountered it when we were testing with the Checklists.

Jul 2 2020, 4:45 PM · MITK (v2021.02)

kalali added a comment to T27493: Rework QmitkContourModelToImageWidget to be time point aware.

In T27493#205157, @floca wrote:

In T27493#205156, @kalali wrote:

see comment in D338

Which one. There are several? ;)

Jul 2 2020, 2:52 PM · MITK (v2021.02)

floca added a comment to T27493: Rework QmitkContourModelToImageWidget to be time point aware.

In T27493#205156, @kalali wrote:

see comment in D338

Jul 2 2020, 2:28 PM · MITK (v2021.02)

kalali added a comment to T27493: Rework QmitkContourModelToImageWidget to be time point aware.

see comment in D338

Jul 2 2020, 2:23 PM · MITK (v2021.02)

floca committed rMITK6ca565676bec: T27477 Improved_node_selection_preference_page_default_settings (authored by floca).

T27477 Improved_node_selection_preference_page_default_settings

Jul 2 2020, 2:17 PM

floca committed rMITKf85b24c88ee3: Fixed review remark. (authored by floca).

Fixed review remark.

Jul 2 2020, 2:17 PM

floca committed rMITKb13220899013: Fixed review remark (authored by floca).

Fixed review remark

Jul 2 2020, 2:17 PM

floca committed rMITKc5502abe64fc: Added better default behavior if no preferences are set so far. (authored by floca).

Added better default behavior if no preferences are set so far.

Jul 2 2020, 2:17 PM

floca closed T27477: [Segmentation] Selection concept displays 'Favorite node list' by default leading to user confusion as Resolved by committing rMITKc5502abe64fc: Added better default behavior if no preferences are set so far..

Jul 2 2020, 2:17 PM · Cleared, MITK (v2021.02)

kalali added a project to T26973: [Segmentation] RegionGrowing3D preview only in 3D Widget: Missing Info.

I tested this with Pic3D and can not reproduce this bug:

Jul 2 2020, 11:12 AM · MITK (v2021.02)

kalali closed T25825: [Segmentation] Crash using Watershed on different time steps as Resolved.

Can not be reproduced.

Jul 2 2020, 9:58 AM · MITK (v2021.02)

kalali updated the task description for T24775: Refactor plugins to use the new node selection widgets.

Jul 2 2020, 9:47 AM · MITK, Restricted Project, Cleared

kalali closed T27476: [Segmentation] Crash if new segmentation is created with timestep different than 0 as Resolved.

Jul 2 2020, 9:31 AM · MITK (v2021.02)

Jul 1 2020

floca added a project to T27476: [Segmentation] Crash if new segmentation is created with timestep different than 0: Restricted Project.

As D329 is now landed. I think this is an low hanging fruit to check if the problem still exists ;)

Jul 1 2020, 4:33 PM · MITK (v2021.02)

kislinsk created Kaapana (internal) (Open Source Rocketplant).

Jul 1 2020, 2:57 PM

kislinsk removed a member for MITK: • cordes.

Jul 1 2020, 1:44 PM

kislinsk added a member for MITK: • e249r.

Jul 1 2020, 1:41 PM

gaoh added a member for SIDT: • e249r.

Jul 1 2020, 1:36 PM

kislinsk placed T27320: No LocalStorage for PlaneGeometryDataVtkMapper3D up for grabs.

Jul 1 2020, 12:27 PM · MITK, Pull Request

kislinsk placed T27458: Activate Test also for arc diff builds to avoid missed unit test errors up for grabs.

Jul 1 2020, 12:26 PM · MITK (v2024.06), CI

kislinsk closed T27367: Graphical unit tests fail on some linux setups as Resolved.

Jul 1 2020, 12:24 PM · MITK (v2021.02)

kislinsk closed T27379: Set up Ubuntu 20.04 CI clients as Resolved.

We now have Ubuntu 18.04 and Ubuntu 20.04 clients. Continuous and nightly clients already running. Waiting for another week to activate the Differential clients, as it required code changes and I want to give current Diffs a chance to build that do not already include the fix.

Jul 1 2020, 12:23 PM · Cleared, Restricted Project, MITK (v2021.02)

kislinsk closed T27016: Use OpenStack for our CI system as Resolved.

Closing this meta task. Work will be done in targeted tasks.

Jul 1 2020, 12:18 PM · Restricted Project, CI

floca claimed T27483: DICOM import of multi-channel data not working.

Jul 1 2020, 10:36 AM · MITK (v2021.02), Restricted Project, DICOM

kislinsk moved T24771: [MITKDoc] Add a concept documentation for the data storage inspectors and the overhaul of the selection concept from Backlog to Documentation on the MITK (v2021.02) board.

Jul 1 2020, 10:23 AM · MITK (v2021.02)

kislinsk moved T27506: Extend checklists for segmentation view from MaaS to Segmentation on the MITK (v2021.02) board.

Jul 1 2020, 10:22 AM · MITK (v2022.04), Cleared

kislinsk renamed T27506: Extend checklists for segmentation view from Extend checklists for statistic view to Extend checklists for segmentation view.

Jul 1 2020, 10:22 AM · MITK (v2022.04), Cleared

kislinsk moved T27506: Extend checklists for segmentation view from Segmentation to MaaS on the MITK (v2021.02) board.

Jul 1 2020, 10:22 AM · MITK (v2022.04), Cleared