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Jan 28 2021

floca claimed T28221: [ImageStatistics] Histogram is not updated when using ROI.
Jan 28 2021, 10:00 PM · MITK (v2021.02)
floca added a comment to T28222: [ImageStatistics] Histogram is only shown for timestep 0.

Discussion already decided... *grrr*
The only way i was abel to find to quick fix T28221 and T28223, without rewritting the whole QmitChart and QmitkHistogramWidget (wich is currently out of question due to a lack of time), is by only using one fixed label name.
So at least this implicitly fixes T28206 somehow and decides the solution of this task.

Jan 28 2021, 9:59 PM · MITK (v2021.02)
kislinsk claimed T28220: [Image Cropper] Masking a 4D image and overwrite the original one leads to strange result.
Jan 28 2021, 9:53 PM · MITK (v2021.02)
kislinsk updated the task description for T28000: MITK v2021.02.
Jan 28 2021, 9:52 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk closed T28219: [Image Cropper] Selection widget does not allow to create a new bounding box as Resolved.
Jan 28 2021, 9:51 PM · MITK (v2021.02)
kislinsk closed T28219: [Image Cropper] Selection widget does not allow to create a new bounding box, a subtask of T28000: MITK v2021.02, as Resolved.
Jan 28 2021, 9:51 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk claimed T28219: [Image Cropper] Selection widget does not allow to create a new bounding box.
Jan 28 2021, 9:51 PM · MITK (v2021.02)
kislinsk updated the task description for T28000: MITK v2021.02.
Jan 28 2021, 9:46 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk closed T28213: [Point Set] Clear current time step does not work, a subtask of T28000: MITK v2021.02, as Resolved.
Jan 28 2021, 9:43 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk closed T28213: [Point Set] Clear current time step does not work as Resolved.

The context menu actions are either not implemented or dysfunctional. Disable the context menu for now.

Jan 28 2021, 9:43 PM · MITK (v2021.02)
kislinsk closed T28212: [Point Set] Only points for time step 0 are listed, a subtask of T28000: MITK v2021.02, as Invalid.
Jan 28 2021, 9:34 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk closed T28212: [Point Set] Only points for time step 0 are listed as Invalid.

Closing as "invalid". The secret is to use the mouse wheel to navigate between time steps in the point set widget. It is not in sync with the Image Navigator. The whole plugin and widgets need a complete rewrite to actually work reliably with dynamic images, though, but this is out of scope for this task and the upcoming release.

Jan 28 2021, 9:33 PM · MITK (v2021.02)
floca claimed T28223: [ImageStatistics] Deleting a datanode after statistics leads to no histogram update for the next node.
Jan 28 2021, 8:41 PM · Next Milestone, MITK
kalali added a comment to T28191: Refactor and extend LevelWindow unit tests.

I found several reasons to do a pseudo-UI test so I will come up with a draft for a test of the relevant classes.

Jan 28 2021, 8:36 PM · Auto-closed, MITK
floca updated subscribers of T28222: [ImageStatistics] Histogram is only shown for timestep 0.

Looked into it. So for quick fix we hace only the following options:

Jan 28 2021, 8:22 PM · MITK (v2021.02)
kislinsk closed T28224: [Point Set] List of points is not shown if plugin opened after data loading, a subtask of T28000: MITK v2021.02, as Resolved.
Jan 28 2021, 7:33 AM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk closed T28224: [Point Set] List of points is not shown if plugin opened after data loading as Resolved.
Jan 28 2021, 7:33 AM · MITK (v2021.02)
kislinsk claimed T28224: [Point Set] List of points is not shown if plugin opened after data loading.
Jan 28 2021, 7:17 AM · MITK (v2021.02)
kislinsk claimed T28213: [Point Set] Clear current time step does not work.
Jan 28 2021, 7:17 AM · MITK (v2021.02)
kislinsk claimed T28212: [Point Set] Only points for time step 0 are listed.
Jan 28 2021, 7:17 AM · MITK (v2021.02)

Jan 27 2021

kislinsk updated the task description for T28000: MITK v2021.02.
Jan 27 2021, 11:09 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk closed T28203: [Segmentation] 2-d correction tool does not work anymore and should be removed, a subtask of T28000: MITK v2021.02, as Resolved.
Jan 27 2021, 11:02 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk closed T28203: [Segmentation] 2-d correction tool does not work anymore and should be removed as Resolved.

Thanks for the hint.

Jan 27 2021, 11:02 PM · MITK (v2021.02)
kalali renamed T28203: [Segmentation] 2-d correction tool does not work anymore and should be removed from [Segmentation] 2-d correction tool does not work anymore to [Segmentation] 2-d correction tool does not work anymore and should be removed.
Jan 27 2021, 10:53 PM · MITK (v2021.02)
kalali added a comment to T28203: [Segmentation] 2-d correction tool does not work anymore and should be removed.

Ok, but then we can at least close T22391.

Jan 27 2021, 10:52 PM · MITK (v2021.02)
kislinsk claimed T28203: [Segmentation] 2-d correction tool does not work anymore and should be removed.

Is this obsolete know with the discussion results stated in D459?

Jan 27 2021, 10:50 PM · MITK (v2021.02)
kislinsk updated the task description for T28000: MITK v2021.02.
Jan 27 2021, 10:48 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk closed T28218: [Segmentation] The text in the "Create a static mask?" message box is way to technical, a subtask of T28000: MITK v2021.02, as Resolved.
Jan 27 2021, 10:46 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk closed T28218: [Segmentation] The text in the "Create a static mask?" message box is way to technical as Resolved.

Capture.PNG (187×502 px, 9 KB)

Jan 27 2021, 10:46 PM · MITK (v2021.02)
kislinsk updated the task description for T28000: MITK v2021.02.
Jan 27 2021, 10:26 PM · MITK-ProjectTemplate, MITK (v2021.02)
kalali added a comment to T28191: Refactor and extend LevelWindow unit tests.

Most of the functions that can be called from the QmitkLevelWindowWidget (meaning the slider, the line edit and the contextmenu) are covered in mitkLevelWindowTest.
However, the LevelWindowManager tests where outdated and suboptimal, so I opened T28204.

Jan 27 2021, 6:40 PM · Auto-closed, MITK
kalali updated the task description for T28204: Refactor LevelWindowManagerTest.
Jan 27 2021, 6:36 PM · MITK (v2021.10)
kalali added a subtask for T28108: [Release Checklists] Prepare release checklists: Unknown Object (Maniphest Task).
Jan 27 2021, 6:27 PM · MITK
kalali added a subtask for T28108: [Release Checklists] Prepare release checklists: Unknown Object (Maniphest Task).
Jan 27 2021, 6:26 PM · MITK
kalali added a comment to T28203: [Segmentation] 2-d correction tool does not work anymore and should be removed.

Is this obsolete know with the discussion results stated in D459?

Jan 27 2021, 6:21 PM · MITK (v2021.02)
kalali closed T27498: [Selection widgets] Define default for auto selection / listening mechanism as Resolved.
Jan 27 2021, 6:08 PM · Restricted Project, MITK (v2021.02)
kislinsk updated the task description for T28000: MITK v2021.02.
Jan 27 2021, 5:59 PM · MITK-ProjectTemplate, MITK (v2021.02)
kalali moved T27571: Multilabel segmentation does not work with US DICOM images from Backlog to Segmentation on the MITK (v2021.02) board.
Jan 27 2021, 5:59 PM · MITK (v2021.10), Missing Info, Restricted Project
kalali moved T27883: [Segmentation] Crash and interpolation issues in static segmentation on reference image with strange arbitrary time geometry (3d+t heart) from Backlog to Segmentation on the MITK (v2021.02) board.
Jan 27 2021, 5:58 PM · MITK (v2021.02)
kalali moved T28138: [MultiLabel Segmentation] Add tests for the LabelSetImage from Backlog to Segmentation on the MITK (v2021.02) board.
Jan 27 2021, 5:57 PM · MITK (v2022.10)
kalali moved T28223: [ImageStatistics] Deleting a datanode after statistics leads to no histogram update for the next node from Backlog to MaaS on the MITK (v2021.02) board.
Jan 27 2021, 5:57 PM · Next Milestone, MITK
kislinsk closed T28216: Shortlinks in Windows installer for command-line apps on Windows use START command, a subtask of T28000: MITK v2021.02, as Resolved.
Jan 27 2021, 5:57 PM · MITK-ProjectTemplate, MITK (v2021.02)
kalali moved T28222: [ImageStatistics] Histogram is only shown for timestep 0 from Backlog to MaaS on the MITK (v2021.02) board.
Jan 27 2021, 5:57 PM · MITK (v2021.02)
kislinsk closed T28216: Shortlinks in Windows installer for command-line apps on Windows use START command as Resolved.
Jan 27 2021, 5:57 PM · MITK (v2021.02)
kalali moved T28221: [ImageStatistics] Histogram is not updated when using ROI from Backlog to MaaS on the MITK (v2021.02) board.
Jan 27 2021, 5:57 PM · MITK (v2021.02)
kalali moved T28203: [Segmentation] 2-d correction tool does not work anymore and should be removed from Backlog to Segmentation on the MITK (v2021.02) board.
Jan 27 2021, 5:56 PM · MITK (v2021.02)
kalali moved T28218: [Segmentation] The text in the "Create a static mask?" message box is way to technical from Backlog to Segmentation on the MITK (v2021.02) board.
Jan 27 2021, 5:56 PM · MITK (v2021.02)
kahl triaged T28224: [Point Set] List of points is not shown if plugin opened after data loading as Normal priority.
Jan 27 2021, 3:51 PM · MITK (v2021.02)
kislinsk added a comment to T28222: [ImageStatistics] Histogram is only shown for timestep 0.

Ralf estimates that it takes a long time to fix this so we may come up with intermediate solutions or state in the UI that only 3d images are supported.

Jan 27 2021, 3:46 PM · MITK (v2021.02)
thomass added a parent task for T28219: [Image Cropper] Selection widget does not allow to create a new bounding box: T28000: MITK v2021.02.
Jan 27 2021, 3:45 PM · MITK (v2021.02)
thomass added a subtask for T28000: MITK v2021.02: T28219: [Image Cropper] Selection widget does not allow to create a new bounding box.
Jan 27 2021, 3:45 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk added a comment to T28217: [MatchPoint] Registrations generated with manipulator have no proper PropertyReleations.

This is not high priority. Fix other release bugs before, please. :-)

Jan 27 2021, 3:36 PM · MITK (v2024.06)
kislinsk removed a subtask for T28000: MITK v2021.02: T28215: [Volume Visualization] Computation types Avg and Max have huge differences between CPU and GPU.
Jan 27 2021, 3:32 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk removed a subtask for T28000: MITK v2021.02: T28209: [MatchPoint] Preference setting additional algorithm does not work.
Jan 27 2021, 3:27 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk edited projects for T28127: Reopen segmentation in MITK, added: MITK (v2021.02), Missing Info; removed Next Milestone, MITK.
Jan 27 2021, 3:25 PM · MITK (v2021.02), Restricted Project, Kaapana (internal)
kislinsk removed a subtask for T28000: MITK v2021.02: T28207: MITK DicomBrowser q/r Retrieve part crash.
Jan 27 2021, 3:18 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk added a comment to T28206: [Image Statistics] Renaming segmentation or planar figure based ROI nodes breaks histogram.

Similar to T28223: [ImageStatistics] Deleting a datanode after statistics leads to no histogram update for the next node.

Jan 27 2021, 3:16 PM · MITK (v2024.06)
kislinsk removed a subtask for T28000: MITK v2021.02: T28205: [View Navigator] View names in do not update their appearance when opened/closed.
Jan 27 2021, 3:14 PM · MITK-ProjectTemplate, MITK (v2021.02)
thomass added a comment to T28223: [ImageStatistics] Deleting a datanode after statistics leads to no histogram update for the next node.

probably related to T28206

Jan 27 2021, 3:14 PM · Next Milestone, MITK
kislinsk removed a subtask for T28000: MITK v2021.02: T27578: 2021.1 Linux installer does not work on Fedora.
Jan 27 2021, 3:13 PM · MITK-ProjectTemplate, MITK (v2021.02)
thomass added a subtask for T28000: MITK v2021.02: T28220: [Image Cropper] Masking a 4D image and overwrite the original one leads to strange result.
Jan 27 2021, 3:08 PM · MITK-ProjectTemplate, MITK (v2021.02)
thomass added a parent task for T28220: [Image Cropper] Masking a 4D image and overwrite the original one leads to strange result: T28000: MITK v2021.02.
Jan 27 2021, 3:08 PM · MITK (v2021.02)
thomass added a parent task for T28221: [ImageStatistics] Histogram is not updated when using ROI: T28000: MITK v2021.02.
Jan 27 2021, 3:07 PM · MITK (v2021.02)
thomass added a subtask for T28000: MITK v2021.02: T28221: [ImageStatistics] Histogram is not updated when using ROI.
Jan 27 2021, 3:07 PM · MITK-ProjectTemplate, MITK (v2021.02)
thomass added a subtask for T28000: MITK v2021.02: T28222: [ImageStatistics] Histogram is only shown for timestep 0.
Jan 27 2021, 3:06 PM · MITK-ProjectTemplate, MITK (v2021.02)
thomass added a parent task for T28222: [ImageStatistics] Histogram is only shown for timestep 0: T28000: MITK v2021.02.
Jan 27 2021, 3:06 PM · MITK (v2021.02)
kislinsk placed T28206: [Image Statistics] Renaming segmentation or planar figure based ROI nodes breaks histogram up for grabs.
Jan 27 2021, 3:06 PM · MITK (v2024.06)
kislinsk placed T28212: [Point Set] Only points for time step 0 are listed up for grabs.
Jan 27 2021, 3:06 PM · MITK (v2021.02)
thomass added a parent task for T28223: [ImageStatistics] Deleting a datanode after statistics leads to no histogram update for the next node: T28000: MITK v2021.02.
Jan 27 2021, 3:06 PM · Next Milestone, MITK
thomass added a subtask for T28000: MITK v2021.02: T28223: [ImageStatistics] Deleting a datanode after statistics leads to no histogram update for the next node.
Jan 27 2021, 3:06 PM · MITK-ProjectTemplate, MITK (v2021.02)
thomass updated the task description for T28223: [ImageStatistics] Deleting a datanode after statistics leads to no histogram update for the next node.
Jan 27 2021, 3:00 PM · Next Milestone, MITK
thomass triaged T28223: [ImageStatistics] Deleting a datanode after statistics leads to no histogram update for the next node as High priority.
Jan 27 2021, 3:00 PM · Next Milestone, MITK
kislinsk added a comment to T28211: [Image Rendering] Color change/ Opacity strange behaviour (only in Windows installers).

It's definitely linked to the crosshair. If you disable the crosshair everything works immediately.

Jan 27 2021, 2:57 PM · MITK (v2021.02)
kislinsk added a comment to T28211: [Image Rendering] Color change/ Opacity strange behaviour (only in Windows installers).

Zoom into the image until you have big pixels. Click in a pixel, crosshair snaps to that pixel, color/opacity is not shown. Click on that pixel again and it works. You can also click, hold, and move the cursor. As soon as you move the cursor it works. Stops working as soon as you leave the pixel and the crosshair snaps to the next pixel.

Jan 27 2021, 2:54 PM · MITK (v2021.02)
thomass triaged T28222: [ImageStatistics] Histogram is only shown for timestep 0 as High priority.
Jan 27 2021, 2:53 PM · MITK (v2021.02)
kislinsk renamed T28211: [Image Rendering] Color change/ Opacity strange behaviour (only in Windows installers) from [Image Rendering] Color change/ Opacity strange behaviour to [Image Rendering] Color change/ Opacity strange behaviour (only in Windows installers).
Jan 27 2021, 2:46 PM · MITK (v2021.02)
thomass added a comment to T28221: [ImageStatistics] Histogram is not updated when using ROI.

However, checking "Show Subchart" always invokes an update and then you can see it

Jan 27 2021, 2:42 PM · MITK (v2021.02)
thomass triaged T28221: [ImageStatistics] Histogram is not updated when using ROI as High priority.
Jan 27 2021, 2:40 PM · MITK (v2021.02)
thomass edited projects for T28219: [Image Cropper] Selection widget does not allow to create a new bounding box, added: MITK (v2021.02); removed MITK.
Jan 27 2021, 2:37 PM · MITK (v2021.02)
thomass edited projects for T28220: [Image Cropper] Masking a 4D image and overwrite the original one leads to strange result, added: MITK (v2021.02); removed MITK.
Jan 27 2021, 2:36 PM · MITK (v2021.02)
kislinsk added a comment to T28211: [Image Rendering] Color change/ Opacity strange behaviour (only in Windows installers).

Only happens in Windows installers. How do we debug this?

Jan 27 2021, 2:28 PM · MITK (v2021.02)
kislinsk triaged T28218: [Segmentation] The text in the "Create a static mask?" message box is way to technical as Unbreak Now! priority.
Jan 27 2021, 2:27 PM · MITK (v2021.02)
kislinsk added a comment to T28211: [Image Rendering] Color change/ Opacity strange behaviour (only in Windows installers).

It is dependent of the crosshair position. If you do not see anything, carefully move the crosshair around in a 2d window and there is always at least a pixel or region, where the changes are visible. What is going on? 🐛

Jan 27 2021, 2:11 PM · MITK (v2021.02)
kislinsk raised the priority of T28211: [Image Rendering] Color change/ Opacity strange behaviour (only in Windows installers) from Normal to Unbreak Now!.

Wow, this is really a blocker. Didn't work in the December snapshot installer neither. Is it specific to installed versions maybe? I will try with a build-tree version...

Jan 27 2021, 2:07 PM · MITK (v2021.02)
floca triaged T28217: [MatchPoint] Registrations generated with manipulator have no proper PropertyReleations as Normal priority.
Jan 27 2021, 2:05 PM · MITK (v2024.06)
kislinsk triaged T28216: Shortlinks in Windows installer for command-line apps on Windows use START command as Unbreak Now! priority.
Jan 27 2021, 2:02 PM · MITK (v2021.02)
kislinsk removed a project from T28207: MITK DicomBrowser q/r Retrieve part crash: MITK-ProjectTemplate.
Jan 27 2021, 1:46 PM · MITK, Checklist
kislinsk removed a project from T28209: [MatchPoint] Preference setting additional algorithm does not work: MITK-ProjectTemplate.
Jan 27 2021, 1:46 PM · MITK (v2024.06)
kislinsk removed a project from T28211: [Image Rendering] Color change/ Opacity strange behaviour (only in Windows installers): MITK-ProjectTemplate.
Jan 27 2021, 1:45 PM · MITK (v2021.02)
kislinsk removed a project from T28212: [Point Set] Only points for time step 0 are listed: MITK-ProjectTemplate.
Jan 27 2021, 1:45 PM · MITK (v2021.02)
kislinsk removed a project from T28213: [Point Set] Clear current time step does not work: MITK-ProjectTemplate.
Jan 27 2021, 1:45 PM · MITK (v2021.02)
kislinsk triaged T28215: [Volume Visualization] Computation types Avg and Max have huge differences between CPU and GPU as Low priority.
Jan 27 2021, 1:45 PM · MITK
kahl triaged T28213: [Point Set] Clear current time step does not work as Normal priority.
Jan 27 2021, 1:28 PM · MITK (v2021.02)
kahl triaged T28212: [Point Set] Only points for time step 0 are listed as Normal priority.
Jan 27 2021, 1:20 PM · MITK (v2021.02)
gaoh triaged T28211: [Image Rendering] Color change/ Opacity strange behaviour (only in Windows installers) as Normal priority.
Jan 27 2021, 12:34 PM · MITK (v2021.02)
floca triaged T28209: [MatchPoint] Preference setting additional algorithm does not work as Normal priority.
Jan 27 2021, 11:56 AM · MITK (v2024.06)
gaoh added a subtask for T28000: MITK v2021.02: T28127: Reopen segmentation in MITK.
Jan 27 2021, 11:11 AM · MITK-ProjectTemplate, MITK (v2021.02)
gaoh added a parent task for T28127: Reopen segmentation in MITK: T28000: MITK v2021.02.
Jan 27 2021, 11:11 AM · MITK (v2021.02), Restricted Project, Kaapana (internal)
gaoh claimed T28207: MITK DicomBrowser q/r Retrieve part crash.
Jan 27 2021, 10:58 AM · MITK, Checklist
gaoh renamed T28207: MITK DicomBrowser q/r Retrieve part crash from MITK DicomBrowser Query Retrieve to MITK DicomBrowser q/r Retrieve part crash.
Jan 27 2021, 10:55 AM · MITK, Checklist