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Mar 3 2020

neher added a project to T27167: QmitkChartWidget marker shape: MITK Diffusion.
Mar 3 2020, 11:30 AM · MITK Diffusion, MITK
neher committed rMITK18fab9fa3e35: Merge branch 'T27167-ChartMarkerShape' (authored by neher).
Merge branch 'T27167-ChartMarkerShape'
Mar 3 2020, 11:30 AM
neher committed rMITKc2ec6194cdc7: Disable auto point show (authored by neher).
Disable auto point show
Mar 3 2020, 11:29 AM
nolden added a comment to T27177: Segmentation based on Multiframe CT can not be saved as DICOM without error message.

@thomass Which version did you test this with?

Mar 3 2020, 11:23 AM · Auto-closed, Request for Discussion, Restricted Project, MITK
kislinsk added a comment to T27176: MITK - DICOM Seg - load created files.

So adding a DICOM SEG to a directory already containing other DICOM files makes MITK unable to load the original DICOM files anymore.

Mar 3 2020, 9:59 AM · Missing Info, MITK (v2021.02)
kislinsk added a comment to T27178: MITK - DICOM Seg - loaded DCM SEG not associated with referenced DCM .

Is it still a non-trivial thing? I thought we already have the possibility to handle DICOM references? I may miss the point here but when loading a DICOM image with a reference ID or whatever it is called and if this referenced image is present in the current scene, it should be taken into account, right?

Mar 3 2020, 9:56 AM · Auto-closed, Missing Info, MITK
neher closed T27167: QmitkChartWidget marker shape as Resolved.
Mar 3 2020, 8:49 AM · MITK Diffusion, MITK

Mar 2 2020

schererj added a comment to T27178: MITK - DICOM Seg - loaded DCM SEG not associated with referenced DCM .

Adapted the task to issue #1 only.

Mar 2 2020, 5:57 PM · Auto-closed, Missing Info, MITK
schererj updated the task description for T27178: MITK - DICOM Seg - loaded DCM SEG not associated with referenced DCM .
Mar 2 2020, 5:34 PM · Auto-closed, Missing Info, MITK
floca added a comment to T26368: [ModelFitInspector] Performance if multiple bookmark points are added.

Substential amount of time is lost in the QmitChart widget between the emit signal on the c++ side and the JavaScript-Event, so in the web channel. As each trace/curve triggers its own signal that quickly piles up to a considerably latency.

Mar 2 2020, 5:20 PM · Restricted Project, Restricted Project, MITK
floca added a project to T27178: MITK - DICOM Seg - loaded DCM SEG not associated with referenced DCM : Request for Discussion.

This task mentions two problems.

  1. loaded segmentation is not associated with the original image
  2. loaded segmentation cannot be stored as DICOM Seg
Mar 2 2020, 4:49 PM · Auto-closed, Missing Info, MITK
schererj triaged T27178: MITK - DICOM Seg - loaded DCM SEG not associated with referenced DCM as Unbreak Now! priority.
Mar 2 2020, 4:19 PM · Auto-closed, Missing Info, MITK
kislinsk committed rMITKbad8a11d294c: Merge branch 'T27170-MinimalBuild' (authored by kislinsk).
Merge branch 'T27170-MinimalBuild'
Mar 2 2020, 3:55 PM
schererj added a comment to T27176: MITK - DICOM Seg - load created files.

Same with Linux (Ubuntu 16.04)

Mar 2 2020, 3:53 PM · Missing Info, MITK (v2021.02)
schererj triaged T27176: MITK - DICOM Seg - load created files as Unbreak Now! priority.
Mar 2 2020, 3:48 PM · Missing Info, MITK (v2021.02)
thomass triaged T27177: Segmentation based on Multiframe CT can not be saved as DICOM without error message as Unbreak Now! priority.
Mar 2 2020, 3:44 PM · Auto-closed, Request for Discussion, Restricted Project, MITK
gaoh created T27176: MITK - DICOM Seg - load created files.
Mar 2 2020, 3:24 PM · Missing Info, MITK (v2021.02)
kislinsk committed rMITK5eaf2c0b0fb8: Move build configuration processing before Qt handling (authored by kislinsk).
Move build configuration processing before Qt handling
Mar 2 2020, 3:14 PM
kislinsk committed rMITK0320e9daaef1: Fix missing quotes (authored by kislinsk).
Fix missing quotes
Mar 2 2020, 2:23 PM
kislinsk closed T27172: Update supported platforms as Resolved.
Mar 2 2020, 12:29 PM · MITK
kislinsk committed rMITK2bb057a6115b: Merge branch 'T27172-UpdateSupportedPlatforms' (authored by kislinsk).
Merge branch 'T27172-UpdateSupportedPlatforms'
Mar 2 2020, 12:29 PM
kislinsk committed rMITK9cf1d15539bc: Update supported platforms (authored by kislinsk).
Update supported platforms
Mar 2 2020, 12:27 PM
kislinsk added a comment to T27172: Update supported platforms.

Pushed new branch T27172-UpdateSupportedPlatforms.

Mar 2 2020, 12:27 PM · MITK
kislinsk triaged T27172: Update supported platforms as Wishlist priority.
Mar 2 2020, 12:26 PM · MITK
neher committed rMITK8e2fc363b8cd: Merge branch 'T27167-ChartMarkerShape' (authored by neher).
Merge branch 'T27167-ChartMarkerShape'
Mar 2 2020, 12:18 PM
neher committed rMITK3dba563dc5a2: Enable to set marker symbol. Fix dashed line bug. Allow saving of plot as svg. (authored by neher).
Enable to set marker symbol. Fix dashed line bug. Allow saving of plot as svg.
Mar 2 2020, 12:12 PM
neher added a comment to T27167: QmitkChartWidget marker shape.

Pushed new branch T27167-ChartMarkerShape.

Mar 2 2020, 12:12 PM · MITK Diffusion, MITK
floca committed rMITK21171260f247: Merge remote-tracking branch 'origin/master' into T26820… (authored by floca).
Merge remote-tracking branch 'origin/master' into T26820…
Mar 2 2020, 10:59 AM
floca committed rMITK23b07c9a6b5f: First draft of the flow bench (authored by floca).
First draft of the flow bench
Mar 2 2020, 10:59 AM
floca committed rMITKcc05826188ed: Corrected deprecated file headers (authored by floca).
Corrected deprecated file headers
Mar 2 2020, 10:59 AM
floca committed rMITKb0fb6ce43e69: Removed redundant cmake statement (authored by floca).
Removed redundant cmake statement
Mar 2 2020, 10:59 AM
floca committed rMITK8801b1abf3d7: Merge remote-tracking branch 'origin/master' into T26820… (authored by floca).
Merge remote-tracking branch 'origin/master' into T26820…
Mar 2 2020, 10:59 AM
floca committed rMITK5c9d33a0c94c: Fixed review remarks (authored by floca).
Fixed review remarks
Mar 2 2020, 10:59 AM
kislinsk closed T27168: Fix default animation range for slice and time animations as Resolved.
Mar 2 2020, 9:35 AM · MITK

Mar 1 2020

floca closed T19124: When selecting more than one measurement, statistics aren't calculated as Resolved.
Mar 1 2020, 9:26 PM · Bugzilla, MITK

Feb 28 2020

floca triaged T27169: In Matchpoint Algorithm Control: Moving and Target point set switch when the RigidICP.3D.default is selected as Normal priority.
Feb 28 2020, 6:24 PM · MITK
floca added a comment to T27169: In Matchpoint Algorithm Control: Moving and Target point set switch when the RigidICP.3D.default is selected.

@kleina / @hempe: Could you please check and verify if this problem still exists on the current master build?

Feb 28 2020, 6:23 PM · MITK
floca closed T27123: Wrong value in statistic view for some PlanarFigures constellation as Resolved.

Solved/checked with branch of T27122

Feb 28 2020, 5:38 PM · MITK
floca added a revision to T27122: PlanarFigureMaskGenerator::GetPrincipalAxis() is too pedantic: Unknown Object (Differential Revision).
Feb 28 2020, 5:37 PM · MITK
kislinsk added a comment to T27170: Revise minimal build configuration.

The example above shows how to build MitkFileConverter in about 15 minutes. It uses Ninja as build system so do a sudo apt install ninja-build first. I also built the package target afterwards and it succeeded to package everything in a relocatable tarball, however, when executing the packaged MitkFileConverter, dependencies of MitkCommandline were missing. So this is something we have to investigate.

Feb 28 2020, 5:01 PM · MITK
kislinsk committed rMITK4325a085b302: Merge branch 'T27170-MinimalBuild' (authored by kislinsk).
Merge branch 'T27170-MinimalBuild'
Feb 28 2020, 4:55 PM
kislinsk added a comment to T27170: Revise minimal build configuration.
Build MitkFileConverter
# Shallow-clone latest master branch of MITK into MITK directory
git clone --depth=1 https://phabricator.mitk.org/source/mitk.git MITK
Feb 28 2020, 4:54 PM · MITK
kleina updated subscribers of T27169: In Matchpoint Algorithm Control: Moving and Target point set switch when the RigidICP.3D.default is selected.
Feb 28 2020, 4:32 PM · MITK
kleina added a comment to T27169: In Matchpoint Algorithm Control: Moving and Target point set switch when the RigidICP.3D.default is selected.

I made a short video. Sorry for the powerpoint thingy at the end... was to stupid to figure out how to stop the recording :-P:

Feb 28 2020, 4:30 PM · MITK
kislinsk committed rMITKfddd47e6033c: Add minimal whitelist including Core apps (authored by kislinsk).
Add minimal whitelist including Core apps
Feb 28 2020, 4:26 PM
kislinsk committed rMITK44299f401a24: Add minimal build configurations (authored by kislinsk).
Add minimal build configurations
Feb 28 2020, 4:26 PM
kislinsk committed rMITKc236d3cc6378: Move Core apps to own module (authored by kislinsk).
Move Core apps to own module
Feb 28 2020, 4:25 PM
kislinsk committed rMITK66d92427d11a: Use mitkFunctionCreateCommandLineApp (authored by kislinsk).
Use mitkFunctionCreateCommandLineApp
Feb 28 2020, 4:25 PM
kislinsk committed rMITK64cd5e2cf38c: Guard test components with BUILD_TESTING (authored by kislinsk).
Guard test components with BUILD_TESTING
Feb 28 2020, 4:25 PM
kislinsk added a comment to T27170: Revise minimal build configuration.

Pushed new branch T27170-MinimalBuild.

Feb 28 2020, 4:25 PM · MITK
kislinsk updated the task description for T27170: Revise minimal build configuration.
Feb 28 2020, 4:20 PM · MITK
kislinsk triaged T27170: Revise minimal build configuration as Normal priority.
Feb 28 2020, 4:17 PM · MITK
hempe created T27169: In Matchpoint Algorithm Control: Moving and Target point set switch when the RigidICP.3D.default is selected.
Feb 28 2020, 3:46 PM · MITK
floca claimed T27122: PlanarFigureMaskGenerator::GetPrincipalAxis() is too pedantic.
Feb 28 2020, 2:53 PM · MITK
floca closed T27064: NodeSelectionWidgets have to listen to changes of nodes and check if there selection is still valid. as Resolved.
Feb 28 2020, 2:49 PM · MITK
floca closed T27064: NodeSelectionWidgets have to listen to changes of nodes and check if there selection is still valid., a subtask of T23751: Introduction of new selection concept, as Resolved.
Feb 28 2020, 2:49 PM · Noteworthy, MITK
floca committed rMITKef9f6d0e4b97: Reworkd AbstractNodeSelectionWidget and introduced node changed observers (authored by floca).
Reworkd AbstractNodeSelectionWidget and introduced node changed observers
Feb 28 2020, 2:49 PM
floca committed rMITK303ac2bd6b76: Merge branch 'master' into T27064-NodeSelectionWidgets_validate_nodes_on_node_c… (authored by floca).
Merge branch 'master' into T27064-NodeSelectionWidgets_validate_nodes_on_node_c…
Feb 28 2020, 2:49 PM
floca committed rMITK50efa3369527: removed redundant test (which caused gcc errors) (authored by floca).
removed redundant test (which caused gcc errors)
Feb 28 2020, 2:49 PM
floca committed rMITKf2c19c004c19: - Fixed gcc error in test (authored by floca).
- Fixed gcc error in test
Feb 28 2020, 2:49 PM
floca committed rMITK0ecb22879234: Fixed review remarks (authored by floca).
Fixed review remarks
Feb 28 2020, 2:49 PM
floca committed rMITK10e04283429e: fixed gcc compile errors (authored by floca).
fixed gcc compile errors
Feb 28 2020, 2:49 PM
floca committed rMITKd20a08d622f1: Added test for OnNodeModified feature (authored by floca).
Added test for OnNodeModified feature
Feb 28 2020, 2:49 PM
floca committed rMITK3932ce9b8913: Added missing tests. (authored by floca).
Added missing tests.
Feb 28 2020, 2:49 PM
floca committed rMITK2b4103abfe62: Optimized thumbnail sizeing and positioning (authored by floca).
Optimized thumbnail sizeing and positioning
Feb 28 2020, 2:49 PM
floca committed rMITKe6f71353bb79: Improved documentation (authored by floca).
Improved documentation
Feb 28 2020, 2:49 PM
floca committed rMITK11d9a8b927a2: Started unit test for AbstractNodeSelectionWidget (authored by floca).
Started unit test for AbstractNodeSelectionWidget
Feb 28 2020, 2:49 PM
floca committed rMITK044dc2f2f657: Reworkd AbstractNodeSelectionWidget and introduced node changed observers (authored by floca).
Reworkd AbstractNodeSelectionWidget and introduced node changed observers
Feb 28 2020, 2:49 PM
kislinsk committed rMITKc9b4d0b96cf0: Merge branch 'T27168-DefaultRangeForSliceAndTimeAnimations' (authored by kislinsk).
Merge branch 'T27168-DefaultRangeForSliceAndTimeAnimations'
Feb 28 2020, 1:55 PM
kislinsk committed rMITKd5e6766c12a4: Set default animation value range to maximum (authored by kislinsk).
Set default animation value range to maximum
Feb 28 2020, 1:55 PM
kislinsk committed rMITK36b612e83167: Modernize code (authored by kislinsk).
Modernize code
Feb 28 2020, 1:55 PM
kislinsk added a comment to T27168: Fix default animation range for slice and time animations.

Pushed new branch T27168-DefaultRangeForSliceAndTimeAnimations.

Feb 28 2020, 1:54 PM · MITK
kislinsk triaged T27168: Fix default animation range for slice and time animations as Normal priority.
Feb 28 2020, 1:53 PM · MITK
kislinsk closed T19561: Movie Maker: Link to own wiki page instead of FFmpeg download site as Wontfix.
Feb 28 2020, 1:52 PM · MITK, Bugzilla
kalali added a comment to T27154: Define clean workflow for segmentation copying.

Will test MatchPoint Mapper

Feb 28 2020, 1:46 PM · MITK (v2024.06)
kalali closed T25930: [Segmentation] Fill/Erase crashes at non-zero timestep / Issue with ArbitraryTimeGeometry as Invalid.

I still can't reproduce the error.
However, in the meantime things have changed and it is now possible to define a static or dynamic masks. Since it was not clear, what to do, I tested both. In the static case I get an error

core.mod.sfcInterpolation.controller ERROR: Invalid time step requested for interpolation pipeline
Feb 28 2020, 1:35 PM · MITK, Restricted Project
floca added a comment to T27061: Planar figures crash if drawn with empty data storage.

@kalali OK, could you please open task where needed or tag with RequestForDiscussion. Thanks

Feb 28 2020, 1:18 PM · Restricted Project, MITK
kalali added a comment to T27061: Planar figures crash if drawn with empty data storage.

As noted, this was never a real issue since the broken code was never merged.
As D238#5458 stated, measurement options are only enabled if an image is selected.

Feb 28 2020, 1:11 PM · Restricted Project, MITK
floca committed rMITKc931db83236a: Added informative overlays to inspector (authored by floca).
Added informative overlays to inspector
Feb 28 2020, 12:26 PM
floca committed rMITK1db0f9bb06e4: Moved QmitkSimpleTextOverlay to module QtWidget (authored by floca).
Moved QmitkSimpleTextOverlay to module QtWidget
Feb 28 2020, 12:26 PM
floca committed rMITKbeb3d4d757b0: Optimized order of inspectors (authored by floca).
Optimized order of inspectors
Feb 28 2020, 12:26 PM
kalali added a revision to T27100: [MITKDoc] Revise DataManager Plugin Documentation: Unknown Object (Differential Revision).
Feb 28 2020, 12:05 PM · Cleared, MITK (v2021.02)
floca removed a project from T25930: [Segmentation] Fill/Erase crashes at non-zero timestep / Issue with ArbitraryTimeGeometry: Request for Discussion.

Discussion result: @kalali will verify status on the current master (and act accordingly ;))

Feb 28 2020, 11:09 AM · MITK, Restricted Project
neher updated subscribers of T27167: QmitkChartWidget marker shape.
Feb 28 2020, 10:00 AM · MITK Diffusion, MITK
neher triaged T27167: QmitkChartWidget marker shape as Normal priority.
Feb 28 2020, 10:00 AM · MITK Diffusion, MITK
kislinsk committed rMITK2602161c0494: Disable build of docbook manpages (authored by kislinsk).
Disable build of docbook manpages
Feb 28 2020, 9:38 AM
kompan claimed T27097: [MITKDoc] Revise Statistics Plugin Documentation.
Feb 28 2020, 8:13 AM · Cleared, MITK (v2021.02)
thomass claimed T27106: [MITKDoc] Revise Volume Visualization Plugin Documentation.
Feb 28 2020, 8:10 AM · Cleared, MITK (v2021.02)

Feb 27 2020

floca added a comment to T27061: Planar figures crash if drawn with empty data storage.

@kalali Could you tell if this is obsolete now?

Feb 27 2020, 8:32 PM · Restricted Project, MITK
floca added a revision to T27151: Optimize node selection dialoge useability: favorites and history to prominent: Unknown Object (Differential Revision).
Feb 27 2020, 5:47 PM · MITK
gaoyan created T27162: How to activate the features.
Feb 27 2020, 5:02 PM

Feb 26 2020

zimmerer added a member for trixi: adler.
Feb 26 2020, 5:34 PM
kislinsk added a revision to T25745: Integrate new DICOM browser widget from CTK: Unknown Object (Differential Revision).
Feb 26 2020, 2:07 PM · MITK
kislinsk committed rMITKe2db633f76ad: Disable build of docbook manpages (authored by kislinsk).
Disable build of docbook manpages
Feb 26 2020, 2:06 PM
kislinsk added a comment to T25745: Integrate new DICOM browser widget from CTK.

Pushed new branch T25745-DontBuildGDCMManPages.

Feb 26 2020, 2:06 PM · MITK
floca closed T27155: Matchpoint mask not set for non-unsigned-char mask pixel type as Resolved.
Feb 26 2020, 1:19 PM · Restricted Project, MITK
floca committed rMITK8bd625858bc9: Other mask pixel types are supported now (authored by floca).
Other mask pixel types are supported now
Feb 26 2020, 12:49 PM
floca committed rMITK878a47870bf1: Other mask pixel types are supported now (authored by floca).
Other mask pixel types are supported now
Feb 26 2020, 12:49 PM
floca claimed T27155: Matchpoint mask not set for non-unsigned-char mask pixel type.
Feb 26 2020, 10:49 AM · Restricted Project, MITK
floca moved T27155: Matchpoint mask not set for non-unsigned-char mask pixel type from Restricted Project Column to Restricted Project Column on the Restricted Project board.
Feb 26 2020, 10:49 AM · Restricted Project, MITK