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Feb 4 2021

floca updated the task description for T28000: MITK v2021.02.
Feb 4 2021, 10:36 PM · MITK-ProjectTemplate, MITK (v2021.02)
floca removed a subtask for T28000: MITK v2021.02: T28275: [Segmentation] AdaptiveRegionGrowingTool must be refactored / 4D Segmentation returns error message when point is not on the correct timestep.
Feb 4 2021, 10:34 PM · MITK-ProjectTemplate, MITK (v2021.02)
thomass added a subtask for T28000: MITK v2021.02: T28275: [Segmentation] AdaptiveRegionGrowingTool must be refactored / 4D Segmentation returns error message when point is not on the correct timestep.
Feb 4 2021, 2:48 PM · MITK-ProjectTemplate, MITK (v2021.02)
floca added a comment to T28000: MITK v2021.02.

OK. also added all my fixes in the tasks changelog

Feb 4 2021, 9:36 AM · MITK-ProjectTemplate, MITK (v2021.02)
floca updated the task description for T28000: MITK v2021.02.
Feb 4 2021, 9:36 AM · MITK-ProjectTemplate, MITK (v2021.02)

Feb 3 2021

floca closed T27883: [Segmentation] Crash and interpolation issues in static segmentation on reference image with strange arbitrary time geometry (3d+t heart), a subtask of T28000: MITK v2021.02, as Resolved.
Feb 3 2021, 10:08 PM · MITK-ProjectTemplate, MITK (v2021.02)
floca removed a subtask for T28000: MITK v2021.02: T28217: [MatchPoint] Registrations generated with manipulator have no proper PropertyReleations.
Feb 3 2021, 4:08 PM · MITK-ProjectTemplate, MITK (v2021.02)

Feb 2 2021

kislinsk removed a subtask for T28000: MITK v2021.02: T28262: TimeGeometry inconsistent documentation and implementation of time bounds and checks.
Feb 2 2021, 3:52 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk updated the task description for T28000: MITK v2021.02.
Feb 2 2021, 3:47 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk removed a subtask for T28000: MITK v2021.02: T28127: Reopen segmentation in MITK.
Feb 2 2021, 3:45 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk removed a subtask for T28000: MITK v2021.02: T28250: [LevelWindowManager] Different behavior in AutoTopMost case and fallback case.
Feb 2 2021, 1:37 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk added a revision to T28000: MITK v2021.02: Restricted Differential Revision.
Feb 2 2021, 9:57 AM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk updated the task description for T28000: MITK v2021.02.
Feb 2 2021, 9:52 AM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk removed a subtask for T28000: MITK v2021.02: T28264: [Segmentation Utilities] Various issues.
Feb 2 2021, 9:50 AM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk updated the task description for T28000: MITK v2021.02.
Feb 2 2021, 7:14 AM · MITK-ProjectTemplate, MITK (v2021.02)

Feb 1 2021

kislinsk closed T28258: [Segmentation] Core dumped at multiple instances while Closing Project, a subtask of T28000: MITK v2021.02, as Wontfix.
Feb 1 2021, 3:58 PM · MITK-ProjectTemplate, MITK (v2021.02)
kalali added a comment to T28239: Multilabel Segmentation - 3D Segmentation Confused about required outcome.

If you have suggestions for a better structure, please feel free to add it to T28130. The checklists were not even existing before and my goal was to overhaul all the (multi-)label segmentation checklists to include 4D-data tests. I also strove for consistency throughout all checklists.
I see that the bold written statement reads as a new test - that could be changed. However, the test right before already dealt with 4D image data (4D Bild als Testdatensatz) so I assumed it was clear that the 3D-data tests were already finished.
I will also think about some rephrasing / different text format.

Feb 1 2021, 10:48 AM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk removed a subtask for T28000: MITK v2021.02: T28248: [Segmentation] Picking 3D Tool creates a 3D segmentation out of a 4D image.
Feb 1 2021, 10:04 AM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk removed a subtask for T28000: MITK v2021.02: T28263: [2-d surface mapper] Surface is drawn in every time step even if it has limited time bounds.
Feb 1 2021, 9:27 AM · MITK-ProjectTemplate, MITK (v2021.02)
gaoh added a comment to T28239: Multilabel Segmentation - 3D Segmentation Confused about required outcome.

To be honest, I just did not understand the checklist correctly. If you know the outcome and read the checklists, they are fine. But for me, it was like a new test starting with loading and testing 3D Data again. So I misunderstood the line Bei den folgenden Aktionen stets mehrere Label, auch auf unterschiedlichen Layern testen. as beeing a new test, because it had of kind of title character. And that is why I thought, I would start with a 3d Image again...

Feb 1 2021, 8:40 AM · MITK-ProjectTemplate, MITK (v2021.02)

Jan 31 2021

kislinsk updated the task description for T28000: MITK v2021.02.
Jan 31 2021, 2:54 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk closed T28261: [Segmentation] Disable dysfunctional "Suggest Plane" feature of 3-d interpolation, a subtask of T28000: MITK v2021.02, as Resolved.
Jan 31 2021, 2:53 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk added a comment to T28000: MITK v2021.02.

Just to be sure. How is the process of updating this task description. The person who closes a task/fixes a bug also updates the list in the Task description. Correct?

Jan 31 2021, 2:14 PM · MITK-ProjectTemplate, MITK (v2021.02)
floca added a comment to T28000: MITK v2021.02.

Just to be sure. How is the process of updating this task description. The person who closes a task/fixes a bug also updates the list in the Task description. Correct?

Jan 31 2021, 12:07 PM · MITK-ProjectTemplate, MITK (v2021.02)
floca closed T28257: [Segmentation] Core dumped when switching from LiveWire Tool to other tools, a subtask of T28000: MITK v2021.02, as Resolved.
Jan 31 2021, 11:56 AM · MITK-ProjectTemplate, MITK (v2021.02)
floca closed T28243: [Segmentation] 3D Otsu does not show preview for a second time, a subtask of T28000: MITK v2021.02, as Resolved.
Jan 31 2021, 11:55 AM · MITK-ProjectTemplate, MITK (v2021.02)
floca closed T28253: NodeSelection dialoge accepts via double click even if check function evaluate to false., a subtask of T28000: MITK v2021.02, as Resolved.
Jan 31 2021, 11:54 AM · MITK-ProjectTemplate, MITK (v2021.02)
floca removed a subtask for T28000: MITK v2021.02: T28223: [ImageStatistics] Deleting a datanode after statistics leads to no histogram update for the next node.
Jan 31 2021, 11:53 AM · MITK-ProjectTemplate, MITK (v2021.02)
floca closed T28221: [ImageStatistics] Histogram is not updated when using ROI, a subtask of T28000: MITK v2021.02, as Resolved.
Jan 31 2021, 11:48 AM · MITK-ProjectTemplate, MITK (v2021.02)
floca closed T28222: [ImageStatistics] Histogram is only shown for timestep 0, a subtask of T28000: MITK v2021.02, as Resolved.
Jan 31 2021, 11:48 AM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk added a subtask for T28000: MITK v2021.02: T27883: [Segmentation] Crash and interpolation issues in static segmentation on reference image with strange arbitrary time geometry (3d+t heart).
Jan 31 2021, 9:46 AM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk closed T28254: [Multilabel 2D segmentation] Correction Tool, a subtask of T28000: MITK v2021.02, as Wontfix.
Jan 31 2021, 2:21 AM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk updated the task description for T28000: MITK v2021.02.
Jan 31 2021, 1:58 AM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk closed T28240: [MultiLabel Segmentierung] – Optionen as Resolved.
Jan 31 2021, 1:58 AM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk closed T28240: [MultiLabel Segmentierung] – Optionen, a subtask of T28000: MITK v2021.02, as Resolved.
Jan 31 2021, 1:58 AM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk added a comment to T28240: [MultiLabel Segmentierung] – Optionen.

In case of QmitkSegmentationView the preference was even hijacked for something different but the tooltip in the preferences still indicate the originally intended behavior.

Jan 31 2021, 1:31 AM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk added a comment to T28240: [MultiLabel Segmentierung] – Optionen.

The auto-selection preference should work but I think it isn't able anymore to select all other images to hide them as the used predicate was changed to also check the geometry. The predicate used for auto-selection needs to be more general.

Jan 31 2021, 1:28 AM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk claimed T28240: [MultiLabel Segmentierung] – Optionen.

Color is fixed with T28211. The other options really do not work or are implemented very sloppy (volume rendering). I will remove them as one can consider them dummy options at the moment.

Jan 31 2021, 1:02 AM · MITK-ProjectTemplate, MITK (v2021.02)

Jan 30 2021

kislinsk updated the task description for T28000: MITK v2021.02.
Jan 30 2021, 10:05 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk closed T28211: [Image Rendering] Color change/ Opacity strange behaviour (only in Windows installers), a subtask of T28000: MITK v2021.02, as Resolved.
Jan 30 2021, 10:04 PM · MITK-ProjectTemplate, MITK (v2021.02)
floca removed a subtask for T28000: MITK v2021.02: T28206: [Image Statistics] Renaming segmentation or planar figure based ROI nodes breaks histogram.
Jan 30 2021, 4:04 PM · MITK-ProjectTemplate, MITK (v2021.02)
floca added a subtask for T28000: MITK v2021.02: T28253: NodeSelection dialoge accepts via double click even if check function evaluate to false..
Jan 30 2021, 3:36 PM · MITK-ProjectTemplate, MITK (v2021.02)

Jan 29 2021

kislinsk updated the task description for T28000: MITK v2021.02.
Jan 29 2021, 10:19 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk added a subtask for T28000: MITK v2021.02: T28248: [Segmentation] Picking 3D Tool creates a 3D segmentation out of a 4D image.
Jan 29 2021, 9:38 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk added a subtask for T28000: MITK v2021.02: T28243: [Segmentation] 3D Otsu does not show preview for a second time.
Jan 29 2021, 9:28 PM · MITK-ProjectTemplate, MITK (v2021.02)
a178n added a comment to T28242: Live Wire Segmentation bug.

Cool, one less to thing to worry about. :)

Jan 29 2021, 7:03 PM · MITK-ProjectTemplate, MITK (v2021.02)
kalali added a comment to T28242: Live Wire Segmentation bug.

I see your point. The exact task I used is not a duplicate but we discussed this problem with deactivating the tool inside the mentioned task (and you already suggested to fix the checklist). So I get why this task was not found in the first place.

Jan 29 2021, 6:49 PM · MITK-ProjectTemplate, MITK (v2021.02)
floca added a comment to T28242: Live Wire Segmentation bug.

I am not sure if it is realy a dublicate.

Jan 29 2021, 6:39 PM · MITK-ProjectTemplate, MITK (v2021.02)
kalali merged task T28242: Live Wire Segmentation bug into T28113: [Segmentation] LiveWire tool confirms segmentation upon tool or label change.
Jan 29 2021, 6:11 PM · MITK-ProjectTemplate, MITK (v2021.02)
a178n triaged T28242: Live Wire Segmentation bug as Normal priority.
Jan 29 2021, 5:25 PM · MITK-ProjectTemplate, MITK (v2021.02)
kalali added a comment to T28239: Multilabel Segmentation - 3D Segmentation Confused about required outcome.

That's exactly what I wrote and defined in the checklist. The checklist is correct as it perfectly reflects what's happening in the workbench. This is - as described in the title of the corresponding section - valid for 4D test data.

Jan 29 2021, 2:02 PM · MITK-ProjectTemplate, MITK (v2021.02)
gaoh added a comment to T28240: [MultiLabel Segmentierung] – Optionen.

The other options "Show as volume rendering" and "Enable auto-selection mode" are not working as described. Or I didn't get the description..

Jan 29 2021, 1:10 PM · MITK-ProjectTemplate, MITK (v2021.02)
gaoh updated the task description for T28239: Multilabel Segmentation - 3D Segmentation Confused about required outcome.
Jan 29 2021, 1:07 PM · MITK-ProjectTemplate, MITK (v2021.02)
gaoh added a comment to T28240: [MultiLabel Segmentierung] – Optionen.

Ah it seems I was mistaking, at least the transparent overlay works, the color mismatch remains.

Jan 29 2021, 12:50 PM · MITK-ProjectTemplate, MITK (v2021.02)
gaoh added a comment to T28240: [MultiLabel Segmentierung] – Optionen.

Ah, when changing the Preference of Segmenation, the mask is changed... How can I create a "Multilabel Mask"?

Jan 29 2021, 12:46 PM · MITK-ProjectTemplate, MITK (v2021.02)
gaoh triaged T28240: [MultiLabel Segmentierung] – Optionen as Normal priority.
Jan 29 2021, 12:42 PM · MITK-ProjectTemplate, MITK (v2021.02)
gaoh closed T28239: Multilabel Segmentation - 3D Segmentation Confused about required outcome, a subtask of T28000: MITK v2021.02, as Resolved.
Jan 29 2021, 12:25 PM · MITK-ProjectTemplate, MITK (v2021.02)
gaoh closed T28239: Multilabel Segmentation - 3D Segmentation Confused about required outcome as Resolved.

Yes, it is exactly as you described: static -> all timesteps, dynamic -> toolbox to apply to all timesteps or not.

Jan 29 2021, 12:25 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk added a comment to T28239: Multilabel Segmentation - 3D Segmentation Confused about required outcome.

I think it is the checklist. When creating a new segmentation based on a dynamic image you now can decide between a static segmentation that has a single timestep spanning over all reference image timesteps and a dynamic segmentation to have matching timesteps. In the latter case only the current timestep should be affected except the tool is explicitly giving the option to be applied to all timesteps at once. Can you confirm?

Jan 29 2021, 11:37 AM · MITK-ProjectTemplate, MITK (v2021.02)
gaoh triaged T28239: Multilabel Segmentation - 3D Segmentation Confused about required outcome as Normal priority.
Jan 29 2021, 10:58 AM · MITK-ProjectTemplate, MITK (v2021.02)

Jan 28 2021

kislinsk updated the task description for T28000: MITK v2021.02.
Jan 28 2021, 10:29 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk closed T28220: [Image Cropper] Masking a 4D image and overwrite the original one leads to strange result, a subtask of T28000: MITK v2021.02, as Resolved.
Jan 28 2021, 10:28 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk updated the task description for T28000: MITK v2021.02.
Jan 28 2021, 9:52 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk closed T28219: [Image Cropper] Selection widget does not allow to create a new bounding box, a subtask of T28000: MITK v2021.02, as Resolved.
Jan 28 2021, 9:51 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk updated the task description for T28000: MITK v2021.02.
Jan 28 2021, 9:46 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk closed T28213: [Point Set] Clear current time step does not work, a subtask of T28000: MITK v2021.02, as Resolved.
Jan 28 2021, 9:43 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk closed T28212: [Point Set] Only points for time step 0 are listed, a subtask of T28000: MITK v2021.02, as Invalid.
Jan 28 2021, 9:34 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk closed T28224: [Point Set] List of points is not shown if plugin opened after data loading, a subtask of T28000: MITK v2021.02, as Resolved.
Jan 28 2021, 7:33 AM · MITK-ProjectTemplate, MITK (v2021.02)

Jan 27 2021

kislinsk updated the task description for T28000: MITK v2021.02.
Jan 27 2021, 11:09 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk closed T28203: [Segmentation] 2-d correction tool does not work anymore and should be removed, a subtask of T28000: MITK v2021.02, as Resolved.
Jan 27 2021, 11:02 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk updated the task description for T28000: MITK v2021.02.
Jan 27 2021, 10:48 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk closed T28218: [Segmentation] The text in the "Create a static mask?" message box is way to technical, a subtask of T28000: MITK v2021.02, as Resolved.
Jan 27 2021, 10:46 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk updated the task description for T28000: MITK v2021.02.
Jan 27 2021, 10:26 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk updated the task description for T28000: MITK v2021.02.
Jan 27 2021, 5:59 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk closed T28216: Shortlinks in Windows installer for command-line apps on Windows use START command, a subtask of T28000: MITK v2021.02, as Resolved.
Jan 27 2021, 5:57 PM · MITK-ProjectTemplate, MITK (v2021.02)
thomass added a subtask for T28000: MITK v2021.02: T28219: [Image Cropper] Selection widget does not allow to create a new bounding box.
Jan 27 2021, 3:45 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk removed a subtask for T28000: MITK v2021.02: T28215: [Volume Visualization] Computation types Avg and Max have huge differences between CPU and GPU.
Jan 27 2021, 3:32 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk removed a subtask for T28000: MITK v2021.02: T28209: [MatchPoint] Preference setting additional algorithm does not work.
Jan 27 2021, 3:27 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk removed a subtask for T28000: MITK v2021.02: T28207: MITK DicomBrowser q/r Retrieve part crash.
Jan 27 2021, 3:18 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk removed a subtask for T28000: MITK v2021.02: T28205: [View Navigator] View names in do not update their appearance when opened/closed.
Jan 27 2021, 3:14 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk removed a subtask for T28000: MITK v2021.02: T27578: 2021.1 Linux installer does not work on Fedora.
Jan 27 2021, 3:13 PM · MITK-ProjectTemplate, MITK (v2021.02)
thomass added a subtask for T28000: MITK v2021.02: T28220: [Image Cropper] Masking a 4D image and overwrite the original one leads to strange result.
Jan 27 2021, 3:08 PM · MITK-ProjectTemplate, MITK (v2021.02)
thomass added a subtask for T28000: MITK v2021.02: T28221: [ImageStatistics] Histogram is not updated when using ROI.
Jan 27 2021, 3:07 PM · MITK-ProjectTemplate, MITK (v2021.02)
thomass added a subtask for T28000: MITK v2021.02: T28222: [ImageStatistics] Histogram is only shown for timestep 0.
Jan 27 2021, 3:06 PM · MITK-ProjectTemplate, MITK (v2021.02)
thomass added a subtask for T28000: MITK v2021.02: T28223: [ImageStatistics] Deleting a datanode after statistics leads to no histogram update for the next node.
Jan 27 2021, 3:06 PM · MITK-ProjectTemplate, MITK (v2021.02)
kahl triaged T28213: [Point Set] Clear current time step does not work as Normal priority.
Jan 27 2021, 1:28 PM · MITK (v2021.02)
kahl triaged T28212: [Point Set] Only points for time step 0 are listed as Normal priority.
Jan 27 2021, 1:20 PM · MITK (v2021.02)
gaoh triaged T28211: [Image Rendering] Color change/ Opacity strange behaviour (only in Windows installers) as Normal priority.
Jan 27 2021, 12:34 PM · MITK (v2021.02)
floca triaged T28209: [MatchPoint] Preference setting additional algorithm does not work as Normal priority.
Jan 27 2021, 11:56 AM · MITK (v2024.06)
gaoh added a subtask for T28000: MITK v2021.02: T28127: Reopen segmentation in MITK.
Jan 27 2021, 11:11 AM · MITK-ProjectTemplate, MITK (v2021.02)
gaoh claimed T28207: MITK DicomBrowser q/r Retrieve part crash.
Jan 27 2021, 10:58 AM · MITK, Checklist
gaoh renamed T28207: MITK DicomBrowser q/r Retrieve part crash from MITK DicomBrowser Query Retrieve to MITK DicomBrowser q/r Retrieve part crash.
Jan 27 2021, 10:55 AM · MITK, Checklist
gaoh triaged T28207: MITK DicomBrowser q/r Retrieve part crash as Normal priority.
Jan 27 2021, 10:55 AM · MITK, Checklist
nolden added a subtask for T28000: MITK v2021.02: T27578: 2021.1 Linux installer does not work on Fedora.
Jan 27 2021, 9:00 AM · MITK-ProjectTemplate, MITK (v2021.02)

Jan 26 2021

kislinsk added a comment to T28000: MITK v2021.02.

Is there something we should take care of in the future when writing commit messages or writing differential summaries? Or is this something we can not avoid and has to be done when combining everything for the regular changelog?

Jan 26 2021, 7:58 PM · MITK-ProjectTemplate, MITK (v2021.02)
kalali added a comment to T28000: MITK v2021.02.

I noticed that simply merging all the changelogs section-wise doesn't work out very well and generates an overwhelming document probably noone is going to read. I propose the following for the release changelog:

  • Merge the thirdparty dependency update table (simple)
  • Focus on feature and bugfix oneliners and reference the original changelog if there is more related information
  • Roughly sort them by importance/shinyness
  • List references to original changelogs with API-breaking changes but explicitly mark the "big ones" that have migration hints/guides
Jan 26 2021, 2:32 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk updated the task description for T28000: MITK v2021.02.
Jan 26 2021, 1:39 PM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk updated the task description for T28000: MITK v2021.02.
Jan 26 2021, 11:06 AM · MITK-ProjectTemplate, MITK (v2021.02)
kislinsk updated the task description for T28000: MITK v2021.02.
Jan 26 2021, 10:20 AM · MITK-ProjectTemplate, MITK (v2021.02)
floca added a comment to T28000: MITK v2021.02.

The change log proposal sounds reasonable to me.

Jan 26 2021, 9:45 AM · MITK-ProjectTemplate, MITK (v2021.02)