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Oct 14 2021

kislinsk reopened T13958: Replace all *.pic and *.pic.gz files in MITK by *.nrrd as "Open".

I am currently removing the last remains of ipPic from MITK (not yet as a dependency of ipFunc, though), and will also remove or convert the last .pic and .pic.gz files from MITK-Data

Oct 14 2021, 11:53 AM 路 Auto-closed, Bugzilla, MITK
kislinsk closed T26949: DICOM SEG - 3D segmentations with only one slice cannot be reloaded as DICOM SEG as Wontfix.

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Oct 14 2021, 11:39 AM 路 Auto-closed, MITK, DICOM, Missing Info
kislinsk closed T27184: Clipping plane deformation tool doesn't show updates in 3d window as Wontfix.

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Oct 14 2021, 11:39 AM 路 Next Milestone, MITK, Missing Info, Restricted Project
kislinsk closed T27570: US DICOM images are read as 3D volume, a subtask of T27554: Handling of 2D and 2D+t sonographic (US) images, as Wontfix.
Oct 14 2021, 11:39 AM 路 Restricted Project, MITK
kislinsk closed T27570: US DICOM images are read as 3D volume as Wontfix.

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Oct 14 2021, 11:39 AM 路 Auto-closed, Missing Info, Restricted Project, MITK
kislinsk closed T28089: [CEST] Error loading custom data due to alleged spacing of 0 as Wontfix.

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Oct 14 2021, 11:39 AM 路 Auto-closed, Missing Info, Restricted Project, MITK
kislinsk closed T27178: MITK - DICOM Seg - loaded DCM SEG not associated with referenced DCM as Wontfix.

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Oct 14 2021, 11:39 AM 路 Auto-closed, Missing Info, MITK
kislinsk closed T19104: Integrate Coverity Scan static analysis into superbuild and CDash scripts as Wontfix.

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Oct 14 2021, 11:38 AM 路 Pull Request, Bugzilla, MITK
kislinsk closed T23772: Implement adaptor between new segmentation data type and current segmentation data type as Wontfix.

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Oct 14 2021, 11:38 AM 路 MITK
kislinsk closed T23772: Implement adaptor between new segmentation data type and current segmentation data type, a subtask of T23742: Implement proof of concept for new segmentation data type, as Wontfix.
Oct 14 2021, 11:38 AM 路 MITK
kislinsk closed T19347: Direction of crosshair orientation decoration as Wontfix.

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Oct 14 2021, 11:38 AM 路 MITK, Bugzilla
kislinsk closed T25747: Things I came across when correcting fully automatic segmentations as Wontfix.

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Oct 14 2021, 11:38 AM 路 MITK
kislinsk closed T26396: [Segmentation] Refactor functions to create new (empty) segmentations as Wontfix.

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Oct 14 2021, 11:38 AM 路 Next Milestone, Request for Discussion
kislinsk closed T18987: Segmentation plugin: seg. warnings are not displayed if image is loaded via cmd parameter as Wontfix.

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Oct 14 2021, 11:38 AM 路 MITK, Bugzilla
kislinsk closed T24426: [segmentation plugin] child Position nodes are not unchecked if parent segmention is unchecked as Wontfix.

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Oct 14 2021, 11:38 AM 路 MITK
kislinsk closed T26190: Enable double-click in Qmitk*NodeSelectionWidget as Wontfix.

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Oct 14 2021, 11:38 AM 路 MITK
kislinsk closed T19999: DICOM CGet and CMove don't work correctly as Wontfix.

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Oct 14 2021, 11:38 AM 路 Restricted Project, Restricted Project, MITK
kislinsk closed T19652: Segmentation: Add-Tool contouring on specific data sets fails on rotated planes. as Wontfix.

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Oct 14 2021, 11:38 AM 路 MITK, Bugzilla
kislinsk closed T24971: .zip files do not extract in superbuild (Windows non-NTFS file system) as Wontfix.

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Oct 14 2021, 11:38 AM 路 Restricted Project, IGT, MITK
kislinsk closed T26542: Remove functions from StdMultiWidget(Editor) as Wontfix.

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Oct 14 2021, 11:38 AM 路 MITK
kislinsk closed T26543: Enum for AXIAL, SAGITTAL, CORONAL 3D/ORIGINAL/NONE is provided at many different locations as Wontfix.

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Oct 14 2021, 11:38 AM 路 Breaking Change, Noteworthy, MITK
kislinsk closed T26271: [MitkChart] use EnumerationProperty instead of custom maps as Wontfix.

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Oct 14 2021, 11:38 AM 路 MITK
kislinsk closed T25833: Leak/Debugbreak when closing workbench related to MitkChart as Wontfix.

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Oct 14 2021, 11:38 AM 路 Restricted Project, MITK
kislinsk closed T24795: ModelFit visualization bug? as Wontfix.

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Oct 14 2021, 11:38 AM 路 Auto-closed, MITK, Restricted Project
kislinsk closed T26547: Clarify difference between QmitkPointListViewWidget and QmitkPointListView as Wontfix.

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Oct 14 2021, 11:38 AM 路 MITK (v2022.10)
kislinsk closed T19971: Level Window Slider does not fit to values for Center&Window as Wontfix.

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Oct 14 2021, 11:38 AM 路 Restricted Project, MITK
kislinsk closed T16412: Contour of a segmentation doesn't appear at the expected position on tilted images as Wontfix.

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Oct 14 2021, 11:38 AM 路 Bugzilla, MITK
kislinsk closed T18776: Segmentation outlines do not match voxels when using rotated planes as Wontfix.

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Oct 14 2021, 11:38 AM 路 MITK, Bugzilla
kislinsk closed T26572: Allow extension of QmitkRenderWindowMenu with custom layouts as Wontfix.

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Oct 14 2021, 11:38 AM 路 Restricted Project, Restricted Project, MITK
kislinsk closed T23165: DICOM reader provides image fragments where a coherent image volume is desired. as Wontfix.

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Oct 14 2021, 11:38 AM 路 Restricted Project, MITK
kislinsk closed T22161: Possible nullptr dereferencing in plane geometry 3D mapper as Wontfix.

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Oct 14 2021, 11:38 AM 路 MITK
kislinsk closed T23385: Migrate cest plugin from QmitkPlotWidget to MitkChart as Wontfix.

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Oct 14 2021, 11:38 AM 路 Restricted Project, MITK
kislinsk closed T23385: Migrate cest plugin from QmitkPlotWidget to MitkChart, a subtask of T23104: Deprecate QmitkPlotWidget, as Wontfix.
Oct 14 2021, 11:38 AM 路 Restricted Project, MITK
kislinsk closed T23386: Migrate diffusion plugins from QmitkPlotWidget to MitkChart, a subtask of T23104: Deprecate QmitkPlotWidget, as Wontfix.
Oct 14 2021, 11:38 AM 路 Restricted Project, MITK
kislinsk closed T23380: Level/Window scale disappears after loading zero valued image as Wontfix.

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Oct 14 2021, 11:38 AM 路 Bugzilla, MITK
kislinsk closed T23386: Migrate diffusion plugins from QmitkPlotWidget to MitkChart as Wontfix.

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Oct 14 2021, 11:38 AM 路 Restricted Project, MITK
kislinsk closed T25583: Dynamically customize different context menus as Wontfix.

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Oct 14 2021, 11:38 AM 路 MITK
kislinsk closed T24228: Restructure CreateTrackingDeviceSource method in TrackerDeviceTypeInformation implementations as Wontfix.

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Oct 14 2021, 11:38 AM 路 MITK, IGT
kislinsk closed T25583: Dynamically customize different context menus, a subtask of T25056: Refactor data manager context menu, as Wontfix.
Oct 14 2021, 11:38 AM 路 MITK (v2024.06), Noteworthy
kislinsk closed T25774: Segmentation cannot be display when more than one segmetation-raw-image-pair is in Data Manager as Wontfix.

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Oct 14 2021, 11:38 AM 路 MITK
kislinsk closed T25725: "Show in" action is currently not implemented, a subtask of T25056: Refactor data manager context menu, as Wontfix.
Oct 14 2021, 11:38 AM 路 MITK (v2024.06), Noteworthy
kislinsk closed T25625: consistent updating of MTime() when updating MTime of class objects as Wontfix.

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Oct 14 2021, 11:38 AM 路 MITK
kislinsk closed T25725: "Show in" action is currently not implemented as Wontfix.

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Oct 14 2021, 11:38 AM 路 MITK (v2022.10)
kislinsk closed T25760: MITK crashes when deleting files from Data Manager as Wontfix.

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Oct 14 2021, 11:38 AM 路 MITK
kislinsk closed T25942: Annotation instances should not be services (?) as Wontfix.

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Oct 14 2021, 11:38 AM 路 MITK
kislinsk closed T25835: Write migration guide for image statistics calculation, a subtask of T25512: Restructure image statistics calculator, as Wontfix.
Oct 14 2021, 11:38 AM 路 MITK
kislinsk closed T25943: Integrate probe calibration related changes as Wontfix.

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Oct 14 2021, 11:38 AM 路 IMSY, MITK
kislinsk closed T25835: Write migration guide for image statistics calculation as Wontfix.

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Oct 14 2021, 11:38 AM 路 MITK
kislinsk closed T26159: XMLExporter - More than one root element as Wontfix.

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Oct 14 2021, 11:38 AM 路 MITK
kislinsk closed T26162: mitk_create_module PACKAGE_DEPENDS cannot handle target namespaces as Wontfix.

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Oct 14 2021, 11:38 AM 路 MITK
kislinsk closed T26151: ImageGenerator::GenerateFromReference causes HEAP CORRUPTION as Wontfix.

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Oct 14 2021, 11:38 AM 路 Auto-closed, Restricted Project, MITK
kislinsk closed T26165: How to handle erroneous DICOMS/input data? as Wontfix.

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Oct 14 2021, 11:37 AM 路 Request for Discussion, DICOM, MITK
kislinsk closed T26165: How to handle erroneous DICOMS/input data?, a subtask of T25682: mitkBaseGeometry.cpp: Internal ITK matrix inversion error, cannot proceed., as Wontfix.
Oct 14 2021, 11:37 AM 路 MITK
kislinsk closed T26163: Windows installer packages contain some debug binaries as Wontfix.

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Oct 14 2021, 11:37 AM 路 MITK
kislinsk closed T26323: [MitkChart] add feature to highlight/colorize point as Wontfix.

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Oct 14 2021, 11:37 AM 路 Auto-closed, MITK
kislinsk closed T26289: MatchPoint causes warnings during SuperBuild as Wontfix.

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Oct 14 2021, 11:37 AM 路 MITK, MatchPoint
kislinsk closed T26366: [ModelFitInspector] Fixed scaling doesn't work yet as Wontfix.

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Oct 14 2021, 11:37 AM 路 Restricted Project, Restricted Project, MITK
kislinsk closed T26366: [ModelFitInspector] Fixed scaling doesn't work yet, a subtask of T25832: Migrate ModelFit inspector plugin to MitkChart, as Wontfix.
Oct 14 2021, 11:37 AM 路 Restricted Project, Restricted Project, MITK
kislinsk closed T26332: [ImageStatistics] ImageStatisticsContainerManager as function as Wontfix.

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Oct 14 2021, 11:37 AM 路 MITK
kislinsk closed T26371: MITK crash when starting tracking during editing tool information as Wontfix.

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Oct 14 2021, 11:37 AM 路 Auto-closed, IGT, MITK
kislinsk closed T26367: [ModelFitInspector] Remove bookmark doesn't work as Wontfix.

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Oct 14 2021, 11:37 AM 路 Restricted Project, Restricted Project, MITK
kislinsk closed T26367: [ModelFitInspector] Remove bookmark doesn't work, a subtask of T25832: Migrate ModelFit inspector plugin to MitkChart, as Wontfix.
Oct 14 2021, 11:37 AM 路 Restricted Project, Restricted Project, MITK
kislinsk closed T26409: Create new, theme-aware icon for SemanticRelations as Wontfix.

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Oct 14 2021, 11:37 AM 路 Restricted Project, MITK
kislinsk closed T26388: Colorcoding for surfaces does not work correctly as Wontfix.

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Oct 14 2021, 11:37 AM 路 Restricted Project, MITK
kislinsk closed T26410: Create new, theme-aware icon for RenderWindowManager as Wontfix.

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Oct 14 2021, 11:37 AM 路 Restricted Project, MITK
kislinsk closed T26674: Statistics calculation crashes for planar figure size covering less than half a voxel as Wontfix.

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Oct 14 2021, 11:37 AM 路 MITK
kislinsk closed T26631: Tool not correctly visualized when tool tip edited in IGT Navigation Tool Manager as Wontfix.

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Oct 14 2021, 11:37 AM 路 IGT, MITK
kislinsk closed T26675: Logging of absolute time stamps is not possible as Wontfix.

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Oct 14 2021, 11:37 AM 路 IGT, MITK
kislinsk closed T26292: Issue while building MITK tag v2018..04.2 with Python support as Wontfix.

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Oct 14 2021, 11:37 AM 路 MITK (2018-04-2)
kislinsk closed T26565: Workbench crashes when 'Stop Calibration with PLUS' button in PLUS Connection tab is clicked twice as Wontfix.

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Oct 14 2021, 11:37 AM 路 IGT, MITK
kislinsk moved T28735: Relative paths in arguments for MitkFileConverter interpreted as root paths from Backlog to Cycle on the MITK (v2021.10) board.

Maybe related to / has similarities to {T28633}.

Oct 14 2021, 10:32 AM 路 MITK (v2022.04)
kislinsk triaged T28735: Relative paths in arguments for MitkFileConverter interpreted as root paths as Normal priority.
Oct 14 2021, 10:31 AM 路 MITK (v2022.04)
kislinsk closed T28172: Include MITK-ProjectTemplate in MITK Differential builds as Resolved.

All Differential clients include MITK-ProjectTemplate builds.

Oct 14 2021, 9:13 AM 路 MITK (v2021.10), CI
kislinsk edited projects for T27437: Migrate MITK to use ITK 5.x , added: MITK; removed MITK (v2021.10).

Will not be included in the upcoming release. Very likely will make it into the spring release, though, and we will have a few months time to discover bugs and other odd things after the upgrade if we resolve this task soon after the upcoming release.

Oct 14 2021, 7:54 AM 路 MITK-ProjectTemplate, MITK (v2022.04)
kislinsk moved T28491: [Segmentation] Slice interpolation 'confirm for all slices' sometimes crahes from Cycle to Segmentation on the MITK (v2021.10) board.
Oct 14 2021, 7:52 AM 路 MITK (v2023.12)
kislinsk renamed T28491: [Segmentation] Slice interpolation 'confirm for all slices' sometimes crahes from Slice interpolation 'confirm for all slices' not working for large images to Slice interpolation 'confirm for all slices' sometimes crahes.
Oct 14 2021, 7:52 AM 路 MITK (v2023.12)
kislinsk lowered the priority of T28732: [Segmentation] 3d region growing does not work with low seed point values from Unbreak Now! to High.
Oct 14 2021, 7:48 AM 路 MITK (v2021.10)

Oct 13 2021

kislinsk moved T28731: Update README.md of project template from Backlog to Cycle on the MITK (v2021.10) board.
Oct 13 2021, 1:04 PM 路 MITK (v2022.04), MITK-ProjectTemplate
kislinsk triaged T28731: Update README.md of project template as High priority.
Oct 13 2021, 1:04 PM 路 MITK (v2022.04), MITK-ProjectTemplate
kislinsk renamed T28728: [Registration] Translation vector changes when saving a project and loading it again from Translation vektor changes when saving a project and loading it again to [Registration] Translation vector changes when saving a project and loading it again.
Oct 13 2021, 10:06 AM 路 MITK

Oct 8 2021

kislinsk closed T18761: Verify view navigator works after BlueBerry merge, a subtask of T18389: View navigator does not update application menu, as Resolved.
Oct 8 2021, 9:38 AM 路 MITK, Bugzilla
kislinsk closed T18761: Verify view navigator works after BlueBerry merge as Resolved.

I close this meta task. The last open task seems to be T18866, but as the priority indicates it has low priority.

Oct 8 2021, 9:38 AM 路 MITK, Bugzilla

Oct 1 2021

kislinsk closed T28713: 2021 Week 39 (Very Early October) as Resolved.
Oct 1 2021, 11:30 AM 路 MITK
kislinsk edited the content of Changelog.
Oct 1 2021, 11:29 AM 路 MITK
kislinsk added a comment to T28713: 2021 Week 39 (Very Early October).

Deleted branch from rMITK MITK: release/T28713-2021-Week-39.

Oct 1 2021, 11:29 AM 路 MITK
kislinsk committed rMITKc21b8e921135: Merge branch 'master' into develop (authored by kislinsk).
Merge branch 'master' into develop
Oct 1 2021, 11:28 AM
kislinsk committed rMITKee281531a4f7: 2021 Week 39 (Very Early October) (authored by kislinsk).
2021 Week 39 (Very Early October)
Oct 1 2021, 11:27 AM
kislinsk edited the content of 2021 Week 39 (Very Early October).
Oct 1 2021, 11:20 AM
kislinsk edited the content of 2021 Week 26 (Very Early July).
Oct 1 2021, 10:31 AM
kislinsk added a comment to T28713: 2021 Week 39 (Very Early October).

Pushed new branch to rMITK MITK: release/T28713-2021-Week-39.

Oct 1 2021, 10:25 AM 路 MITK
kislinsk triaged T28713: 2021 Week 39 (Very Early October) as Normal priority.
Oct 1 2021, 10:23 AM 路 MITK
kislinsk created T28713: 2021 Week 39 (Very Early October).
Oct 1 2021, 10:23 AM 路 MITK
kislinsk created an object: 2021 Week 39 (Very Early October).
Oct 1 2021, 10:22 AM

Sep 30 2021

kislinsk added a comment to T28711: PixelValue 0 is not drawn in black background color or displayed transparently.

"Jet Transparent" only sets the lowest possible intensity to transparent. You can facilitate the new "Minimum" option in the Image Masking segmentation utility for that.

Sep 30 2021, 3:16 PM 路 Auto-closed, Restricted Project, MITK

Sep 28 2021

kislinsk closed T28706: Cannot build module DataTypesExt becasue lz4 is not linked by CMake as Resolved.
Sep 28 2021, 1:41 PM 路 MITK (v2021.10)
kislinsk added a comment to T28706: Cannot build module DataTypesExt becasue lz4 is not linked by CMake.

Deleted branch from rMITK MITK: bugfix/T28706-LZ4DebugUnix.

Sep 28 2021, 1:41 PM 路 MITK (v2021.10)
kislinsk committed rMITKd54bdbfc0dca: Use debug postfix for lz4 binaries in Unix (authored by kislinsk).
Use debug postfix for lz4 binaries in Unix
Sep 28 2021, 1:41 PM
kislinsk committed rMITK50d3dad092c7: Merge branch 'bugfix/T28706-LZ4DebugUnix' into develop (authored by kislinsk).
Merge branch 'bugfix/T28706-LZ4DebugUnix' into develop
Sep 28 2021, 1:41 PM
kislinsk added a comment to T28706: Cannot build module DataTypesExt becasue lz4 is not linked by CMake.

Pushed new branch to rMITK MITK: bugfix/T28706-LZ4DebugUnix.

Sep 28 2021, 1:40 PM 路 MITK (v2021.10)
kislinsk added a comment to T28706: Cannot build module DataTypesExt becasue lz4 is not linked by CMake.

Thanks for giving it a try. I see that optimized;/work1/patmjen/MITK/MITK-superbuild-test/ep/lib64/liblz4.so is indeed added to the dependencies. So it is strange that it is not picked up by the linker. Or, did you do a Debug build? That would explain it at least since there is only a library specified for Release builds.

Sep 28 2021, 12:22 PM 路 MITK (v2021.10)
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