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Apr 7 2021
Apr 7 2021
floca moved T27684: [Segmentation] Improve Region Growing 2D algorithm and interaction from Backlog to Segmentation on the MITK (v2021.10) board.
floca moved T28437: 3D region growing may have issues when the seed point is on a pixel with value 0 from Backlog to Segmentation on the MITK (v2021.10) board.
floca edited projects for T28320: [Segmentation] Region growing does not work if seed point is already inside a segmentation, added: Request for Discussion, MITK (v2021.10); removed MITK.
floca edited projects for T27684: [Segmentation] Improve Region Growing 2D algorithm and interaction, added: MITK (v2021.10); removed Next Milestone, MITK.
floca edited projects for T26970: [Segmentation] Picking tool: When no region is picked, selected node just gets unselected, added: MITK (v2021.10); removed Next Milestone, MITK.
floca edited projects for T28437: 3D region growing may have issues when the seed point is on a pixel with value 0, added: MITK (v2021.10); removed MITK.
• kleina committed rOBSHYPPOPY74953c92ecff: Merge branch 'fix/T28410-direct-call-of-blackbox-internal' into dev (authored by • kleina).
Merge branch 'fix/T28410-direct-call-of-blackbox-internal' into dev
Merge branch 'master' into dev
• kleina committed rOBSHYPPOPY4b872a7644c7: Don't call internal blackbox_func dirctly. Instead we use blackbox.call() now. (authored by • kleina).
Don't call internal blackbox_func dirctly. Instead we use blackbox.call() now.
• kleina moved T28300: [MPI] MPI as a general dependency might be problematic from Backlog to In Progress on the Hyppopy board.
• kleina moved T28410: MPISolverWrapper's direct call of blackbox internal seems wrong from In Progress to Done on the Hyppopy board.
• kleina moved T26148: Integrate virtual energy function for evaluations tasks from In Progress to Done on the Hyppopy board.
• kleina closed T28410: MPISolverWrapper's direct call of blackbox internal seems wrong as Resolved.
• kleina added a comment to T28410: MPISolverWrapper's direct call of blackbox internal seems wrong.
I agree with the raised point. I checked the classes again and do not see a valid reason behind the blackbox_func call. I will fix this.
• kleina moved T28410: MPISolverWrapper's direct call of blackbox internal seems wrong from Backlog to In Progress on the Hyppopy board.
• kleina added a project to T28410: MPISolverWrapper's direct call of blackbox internal seems wrong: Hyppopy.
• kleina moved T28298: Check for all print outputs in code base and convert them to log messages from Backlog to In Progress on the Hyppopy board.
isensee added a comment to T28437: 3D region growing may have issues when the seed point is on a pixel with value 0.
Link to data: https://sas.desy.de/index.php/s/JQgZT5xLCk6RXDg
kalali moved T27807: [MultiLabel Segmentation] Inspection of module and plugin from Backlog to Segmentation on the MITK (v2021.10) board.
kalali edited projects for T27807: [MultiLabel Segmentation] Inspection of module and plugin, added: MITK (v2021.10); removed Next Milestone, MITK.
kalali edited projects for T28250: [LevelWindowManager] Different behavior in AutoTopMost case and fallback case, added: MITK (v2021.10); removed Next Milestone, MITK.
kalali moved T28108: [Release Checklists] Prepare release checklists from Backlog to Tests/Checklists on the MITK (v2021.10) board.
kalali edited projects for T28108: [Release Checklists] Prepare release checklists, added: MITK (v2021.10); removed MITK.
kalali moved T27711: Rename segmentation image selection label from Backlog to Segmentation on the MITK (v2021.10) board.
kalali moved T27713: [Segmentation] Disable "New" button when no image is selected from Backlog to Segmentation on the MITK (v2021.10) board.
kalali moved T27872: [Segmentation] Region Growing 3D GUI does not provide a "Overwrite" checkbox from Backlog to Segmentation on the MITK (v2021.10) board.
kalali moved T28181: [Segmentation] Should warning messages be passed on to the UI? from Backlog to Segmentation on the MITK (v2021.10) board.
floca moved T28247: [Segmentation] Watershed tool freezes when slider and threshold are set to a low value from Backlog to Cycle on the MITK (v2021.10) board.
kalali renamed T28262: TimeGeometry inconsistent documentation and implementation of time bounds and checks from TimeGeometry inconsistent documentation and implmentation of time bounds and checks to TimeGeometry inconsistent documentation and implementation of time bounds and checks.
kalali edited projects for T27872: [Segmentation] Region Growing 3D GUI does not provide a "Overwrite" checkbox, added: MITK (v2021.10); removed Next Milestone, MITK.
kalali edited projects for T18014: write tool interaction tests for segmentation, added: MITK (v2021.10); removed Next Milestone, MITK.
kalali edited projects for T28358: Data Manager context menu items added multiple times for multi-selections, added: MITK (v2021.10); removed Next Milestone, MITK.
kalali edited projects for T27711: Rename segmentation image selection label, added: MITK (v2021.10); removed Next Milestone, MITK.
kalali edited projects for T28181: [Segmentation] Should warning messages be passed on to the UI?, added: MITK (v2021.10); removed Next Milestone, MITK.
kalali edited projects for T27713: [Segmentation] Disable "New" button when no image is selected, added: MITK (v2021.10); removed MITK.
kalali updated subscribers of T26878: Opacity / transparency of a data node cannot be changed anymore.
Does not seem to happen anymore. Can somebody confirm, e.g. @kislinsk?
floca edited projects for T28262: TimeGeometry inconsistent documentation and implementation of time bounds and checks, added: MITK (v2021.10); removed Next Milestone, MITK.
floca edited projects for T27507: Check the current behavior of the segmentation tools according static and dynamic 4D segmentation, added: MITK (v2021.10); removed Next Milestone, MITK.
floca edited projects for T28247: [Segmentation] Watershed tool freezes when slider and threshold are set to a low value, added: MITK (v2021.10); removed Next Milestone, MITK.
kislinsk edited projects for T24398: Dicom plugin: Retrieve does not work, added: MITK (v2021.10); removed Next Milestone, MITK.
Sorry, I was on vacation.
Apr 6 2021
Apr 6 2021
kislinsk edited projects for T27432: Error loading DCE-MRI DICOM image, added: MITK (v2021.10); removed MITK, Next Milestone.
We now have some manuals but we still need an example-based guide for reviews/Arcanist.
kislinsk edited projects for T27701: Overhaul or remove PluginGenerator, added: MITK (v2021.10); removed MITK, Next Milestone.
kislinsk lowered the priority of T27578: 2021.1 Linux installer does not work on Fedora from Unbreak Now! to High.
kislinsk edited projects for T28172: Include MITK-ProjectTemplate in MITK Differential builds, added: MITK (v2021.10); removed Next Milestone, MITK.
kislinsk edited projects for T28422: Multilabel color map does not produce unique colors, added: MITK (v2021.10); removed MITK.
kislinsk edited projects for T28421: Use whole image grey value must always be executed when switching colormap to 'Multilabel', added: MITK (v2021.10); removed MITK.
menjivar moved T28034: Deep Learning for Sepsis Classification on Parameter Images from Restricted Project Column to Restricted Project Column on the Restricted Project board.
Apr 6 2021, 12:12 PM · Restricted Project
kislinsk triaged T28421: Use whole image grey value must always be executed when switching colormap to 'Multilabel' as High priority.
Apr 2 2021
Apr 2 2021
Apr 1 2021
Apr 1 2021
Apr 1 2021, 12:30 PM · Restricted Project
s669m lowered the priority of T28402: gvisor pods are crashing (CrashLoopBackOff) from Normal to Low.
s669m moved T28402: gvisor pods are crashing (CrashLoopBackOff) from In Progress to Resolved on the Kaapana (internal) board.
s669m moved T28426: gvisor pods unable to access internet ? Proxy issues ?? from In Progress to Resolved on the Kaapana (internal) board.
s669m moved T28426: gvisor pods unable to access internet ? Proxy issues ?? from Discussion to In Progress on the Kaapana (internal) board.
s669m lowered the priority of T28426: gvisor pods unable to access internet ? Proxy issues ?? from Normal to Low.
Mar 31 2021
Mar 31 2021
Created a bug in google gvisor, and one guy is helping us.
Mar 31 2021, 12:18 PM · Restricted Project
• thomass added a comment to T28406: [Segmentation] Examine Live-wire tool for different costfunctions/behavior.
Pushed new branch to rMITK MITK: feature/T28406-PatchForTestingLiveWireBehavior.
• thomass added a comment to T28406: [Segmentation] Examine Live-wire tool for different costfunctions/behavior.
First patch to change following behavior (for user testing only):
- The linesegments are added with each mouseclick of the users without the cost function but by connecting start and endpoint
- If the user double-clicks on the image, the last point is connected with the first adding an additional segment.
Mar 30 2021
Mar 30 2021
paul jaeger <p.jaeger@dkfz.de> committed rREGRCNNfac483a45dfb: update requirements (authored by paul jaeger <p.jaeger@dkfz.de>).
update requirements
paul jaeger <p.jaeger@dkfz.de> committed rMDTPUBLICd0d880465937: update pillow requirement (authored by paul jaeger <p.jaeger@dkfz.de>).
update pillow requirement
s434n triaged T28424: Increase consistentcy of RT dose iso-color preset customization as Low priority.
Mar 29 2021
Mar 29 2021
isensee updated the task description for T28422: Multilabel color map does not produce unique colors.
isensee updated the task description for T28421: Use whole image grey value must always be executed when switching colormap to 'Multilabel'.
isensee updated the task description for T28422: Multilabel color map does not produce unique colors.
isensee renamed T28421: Use whole image grey value must always be executed when switching colormap to 'Multilabel' from Use whole image grey value must always be executed when switching colormap to to Use whole image grey value must always be executed when switching colormap to 'Multilabel'.
Mar 27 2021
Mar 27 2021
Mar 26 2021
Mar 26 2021
Deleted branch from rMITK MITK: release/T28420-2021-Week-12.
Merge branch 'master' into develop
kislinsk committed rMITK4bf9b4da41b5: Make build system aware of a new patch for ITK (authored by kislinsk).
Make build system aware of a new patch for ITK
kislinsk committed rMITK3447b0ecffd5: Multilabel segmentation label visibility (authored by • thomass).
Multilabel segmentation label visibility
kislinsk committed rMITK0a6dee813c1e: Merge remote-tracking branch 'origin/develop' into release/T28420-2021-Week-12 (authored by kislinsk).
Merge remote-tracking branch 'origin/develop' into release/T28420-2021-Week-12
kislinsk committed rMITKd77d800c1ace: Merge branch 'arcpatch-D477' into release/T28420-2021-Week-12 (authored by kislinsk).
Merge branch 'arcpatch-D477' into release/T28420-2021-Week-12