Page MenuHomePhabricator

fangerau (Markus Fangerau)
User

Projects

User Details

User Since
Aug 1 2016, 12:10 PM (181 w, 3 d)

Recent Activity

Aug 2 2016

fangerau added projects to T17545: Volume rendering completely fails on MacOS 10.9: MITK, Bugzilla.
Aug 2 2016, 10:11 AM · Bugzilla, MITK
fangerau added projects to T17543: Image of format *.pic.gz can not be loaded: MITK, Bugzilla.
Aug 2 2016, 10:11 AM · MITK (2014-03), Bugzilla
fangerau added projects to T16985: MITK_CREATE_MODULE - make DEPENDS_INTERNAL work again: MITK, Bugzilla.
Aug 2 2016, 10:10 AM · Bugzilla, MITK
fangerau added projects to T16746: Proper transparency in MITK: MITK, Bugzilla.
Aug 2 2016, 10:09 AM · Bugzilla, MITK
fangerau added projects to T15086: CPU Volume renderer uses only a single thread with ITK 4: MITK, Bugzilla.
Aug 2 2016, 10:03 AM · Bugzilla, MITK
fangerau added a comment to T15086: CPU Volume renderer uses only a single thread with ITK 4.

[e256a2]: Merge branch 'bug-15086-volumerendering-multithreading'

Merged commits:

2013-05-08 16:22:41 Markus Fangerau [0982a0]
fixed multithreading issue

Aug 2 2016, 10:03 AM · Bugzilla, MITK
fangerau added a comment to T15086: CPU Volume renderer uses only a single thread with ITK 4.

New remote branch pushed: bug-15086-volumerendering-multithreading

Aug 2 2016, 10:03 AM · Bugzilla, MITK
fangerau added a comment to T14991: Use ISO-Date formatting for log output.

Yes, makes parsing at lot easier. And its extendable with the ISO UTC timezone offset when required.

Aug 2 2016, 10:03 AM · Bugzilla, MITK
fangerau added a comment to T14841: When switching Volume Rendering modes the GPU memory is not freed.

Hi Oliver,

Aug 2 2016, 10:02 AM · Bugzilla, MITK
fangerau added a comment to T14551: Binary images rendering is broken on mac.

Fixed in T8165

Aug 2 2016, 10:01 AM · MITK (2013-03), Bugzilla
fangerau added projects to T14479: Disable Operating System Debug/Error Popups while running faulty tests on Windows: MITK, Bugzilla.
Aug 2 2016, 10:00 AM · Bugzilla, MITK
fangerau added a comment to T14479: Disable Operating System Debug/Error Popups while running faulty tests on Windows.

Following includes are required to compile the statements in the previous comment:

Aug 2 2016, 10:00 AM · Bugzilla, MITK
fangerau added a comment to T14294: Remotebug for continous MES development base.

New remote branch pushed: bug-14294-mes-devbase4-osx109

Aug 2 2016, 10:00 AM · Bugzilla, MITK
fangerau added a comment to T14294: Remotebug for continous MES development base.

Reopenend for preliminary Desktop client fixed.
Will be soon upgraded to the new MITK release.

Aug 2 2016, 10:00 AM · Bugzilla, MITK
fangerau added a comment to T13817: Need status of assignee: Volumerendering is very slow on Mac OS X.

(In reply to comment #2)

Updating target milestone to upcoming release

Aug 2 2016, 9:59 AM · MITK (2013-12), Bugzilla
fangerau added a comment to T13817: Need status of assignee: Volumerendering is very slow on Mac OS X.

Profiled the GPU volumerenderer with the OpenGL Profiler from the mac graphic tools. The profiler only gives a stackoverview of the called functions but not the corresponding runtime or where they are called. The statistics tools shows that all the runtime is spend during the rendering phase (CGLFlushDrawable). Right now we have no clue wheres's bootleneck.

Aug 2 2016, 9:59 AM · MITK (2013-12), Bugzilla
fangerau added a comment to T13799: White 3D widget after reinit.

Fixed the update Bug.

Aug 2 2016, 9:59 AM · MITK (2012-12), Bugzilla
fangerau added a comment to T13799: White 3D widget after reinit.

New remote branch pushed: bug-13799-whiteWidget

Aug 2 2016, 9:59 AM · MITK (2012-12), Bugzilla
fangerau added a comment to T13799: White 3D widget after reinit.

[b24044]: Merge branch 'bug-13799-whiteWidget'

Merged commits:

2012-12-05 15:39:45 Markus Fangerau [fd3da0]
fixed missing update of 2d renderwindows in 3d geometrymapper

Aug 2 2016, 9:59 AM · MITK (2012-12), Bugzilla
fangerau added a comment to T13795: wrong extent of 2d image when 3d data is loaded.

Turning off visiblity is not expected to automatically reset the world geometry. Or it is required as an feature?

Aug 2 2016, 9:59 AM · Bugzilla, MITK
fangerau added a comment to T13638: QmitkRenderWindow does not support mouse interaction with multiple renderers..

Christian, any idea here?

Aug 2 2016, 9:59 AM · Bugzilla, MITK
fangerau added projects to T13431: mitk::DataNodeFactory with DICOM files behaviour: MITK, Bugzilla.
Aug 2 2016, 9:58 AM · Bugzilla, MITK
fangerau added a comment to T13287: Error loading plain DICOM 2D images.

Loading 2D - DICOM images works in current master after the various DicomReader fixes made by Daniel.

Aug 2 2016, 9:58 AM · Bugzilla, MITK
fangerau added a comment to T12824: [Dashboard] All Rendering Tests fail on some dartclients.

Still to check if it also happens with VTK 5.10 first.

Aug 2 2016, 9:56 AM · Bugzilla, MITK
fangerau added a comment to T12824: [Dashboard] All Rendering Tests fail on some dartclients.

[97a3d7]: Merge branch 'bug-12824-rendering-test-fail'

Merged commits:

2013-01-30 16:31:03 Sandy Engelhardt [95aae9]
Fixing Rendering Test bug by switching off double buffer

Aug 2 2016, 9:56 AM · Bugzilla, MITK
fangerau added a comment to T12398: [VTK 5.10] Integration into superbuild.

Not possible anymore in this release, deferring to next release.

Aug 2 2016, 9:55 AM · MITK (2012-12), Bugzilla
fangerau added projects to T12057: measurements interaction stuck after creation: MITK, Bugzilla.
Aug 2 2016, 9:54 AM · MITK (2012-06), Bugzilla
fangerau added projects to T12048: Hidden segmentation bundle does not react to Datamanager changes, when it becomes activated: MITK, Bugzilla.
Aug 2 2016, 9:54 AM · MITK (2012-09), Bugzilla
fangerau added projects to T12043: 3d-renderwindow not updated upon segmentation changes: MITK, Bugzilla.
Aug 2 2016, 9:54 AM · MITK (2012-06), Bugzilla
fangerau added a comment to T11821: Certain colors are not supported for images.

Still investigating... Wont make it in this release due to complex lighting problems

Aug 2 2016, 9:53 AM · Bugzilla, MITK
fangerau added a comment to T11238: Volumenrendering broken with GPUVolumeMapper3D.

Hi Christian,

Aug 2 2016, 9:52 AM · Bugzilla, MITK
fangerau added a comment to T11130: Crash if mitkDicomSeriesReader misses Tag [0020,0032] ImagePositionPatient.

[1e9ab2]: Merge branch 'bug-11130-StringsFromInvalidChars'

Merged commits:

2012-03-22 10:01:16 Markus Fangerau [b062d7]
COMP: When getting inexisting tags from the scanner, it returns invalid char pointers. Trying to generate strings from these pointers wereissueing wrong assertions, causing the tests to fail under windows.

Aug 2 2016, 9:52 AM · Bugzilla, MITK
fangerau added a comment to T8324: Extend DICOM testing.

Put some people, that may be interested in DICOM testing, on CC list.

Aug 2 2016, 9:45 AM · Bugzilla, MITK
fangerau added a comment to T8324: Extend DICOM testing.

Since rendering tests became stable, we could use them verify proper loading a "chosen" set of images from a network server.

Aug 2 2016, 9:45 AM · Bugzilla, MITK
fangerau added a comment to T8188: Clean up open GL context after VTK rendering.

In our current implementation, the openGL context is in a clean state after our custom GL rendering.

Aug 2 2016, 9:45 AM · MITK (2012-09), Bugzilla
fangerau added a comment to T8165: Improve performance of ImageVtkMapper2D.

New remote branch pushed: bug-8165-mastermerge3

Aug 2 2016, 9:45 AM · MITK (2013-03), Bugzilla
fangerau added a comment to T7803: Using MITK as an external project results in missing library paths.

The application is a "small tool", a command line version of the server using no QT, only MITK and MES.

Aug 2 2016, 9:44 AM · Bugzilla, MITK
fangerau added projects to T5915: Volume Rendering: GPU Raycaster ATI Compatibility: MITK, Bugzilla.
Aug 2 2016, 9:41 AM · Bugzilla, MITK
fangerau added a comment to T5915: Volume Rendering: GPU Raycaster ATI Compatibility.

[SVN revision 27232]
FIX (#5915): found a workaround for the black rendering, seems a standard gl uniform is not transferred to the shader, just using a white light now, works for MITK

Aug 2 2016, 9:41 AM · Bugzilla, MITK
fangerau added a comment to T5915: Volume Rendering: GPU Raycaster ATI Compatibility.

[SVN revision 27230]
COMP (#5915): an essential method was also suppressed on VTK 5.4 #ifdefs/#endif

Aug 2 2016, 9:41 AM · Bugzilla, MITK
fangerau added a comment to T5915: Volume Rendering: GPU Raycaster ATI Compatibility.

[SVN revision 27234]
FIX (#5915): improved lighting a little

Aug 2 2016, 9:41 AM · Bugzilla, MITK
fangerau added a comment to T5917: renderwindowmenu on osx not usable.

[SVN revision 27693]
FIX (#5917): fixed wrong enabled mbilog debug messages

Aug 2 2016, 9:41 AM · Bugzilla, MITK
fangerau added a comment to T5915: Volume Rendering: GPU Raycaster ATI Compatibility.

[SVN revision 27226]
FIX (#5915): fixed error message in mapper / however it still renders black on some ati card

Aug 2 2016, 9:41 AM · Bugzilla, MITK
fangerau added a comment to T5607: On loading image, MITK crashes in OpenGLTextureMapper3D.

[SVN revision 26575]
FIX (#5607): fix vtk OpenGLTextureMapper3D

Aug 2 2016, 9:40 AM · Bugzilla, MITK
fangerau added a comment to T5134: (Diffusion Imaging) Tracking of fibres using diffusion MRI Images.

[SVN revision 26644]
ENH (#5134): FiberTrackts now represented as dtiFiberSpatialObjects

Aug 2 2016, 9:39 AM · Bugzilla, MITK
fangerau added a comment to T5134: (Diffusion Imaging) Tracking of fibres using diffusion MRI Images.

[SVN revision 26389]
ENH (#5134): visualisation of fiber-spline-tubes

Aug 2 2016, 9:39 AM · Bugzilla, MITK
fangerau added a comment to T5134: (Diffusion Imaging) Tracking of fibres using diffusion MRI Images.

[SVN revision 26394]
COMP (#5134): fix warnings, comparison between signed and unsigned integer values

Aug 2 2016, 9:39 AM · Bugzilla, MITK
fangerau added a comment to T5134: (Diffusion Imaging) Tracking of fibres using diffusion MRI Images.

[SVN revision 26393]
COMP (#5134): fix warnings, comparison between signed and unsigned integer values

Aug 2 2016, 9:39 AM · Bugzilla, MITK
fangerau added a comment to T5134: (Diffusion Imaging) Tracking of fibres using diffusion MRI Images.

[SVN revision 25611]
COMP (#5134): fix warnings; changed order of variables in headerfile concerning to init order in cppfile

Aug 2 2016, 9:39 AM · Bugzilla, MITK
fangerau added a comment to T5134: (Diffusion Imaging) Tracking of fibres using diffusion MRI Images.

[SVN revision 25608]
COMP (#5134): fix warnings; changed order of variables in headerfile concerning to init order in cppfile

Aug 2 2016, 9:39 AM · Bugzilla, MITK
fangerau added a comment to T5134: (Diffusion Imaging) Tracking of fibres using diffusion MRI Images.

[SVN revision 25599]
COMP (#5134): fix of SIZE_T declaration. SIZE_T changed to int

Aug 2 2016, 9:39 AM · Bugzilla, MITK
fangerau added a comment to T5134: (Diffusion Imaging) Tracking of fibres using diffusion MRI Images.

[SVN revision 25582]
COMP (#5134): commented Error

Aug 2 2016, 9:39 AM · Bugzilla, MITK
fangerau added a comment to T5134: (Diffusion Imaging) Tracking of fibres using diffusion MRI Images.

[SVN revision 25581]
FIX (#5134): initial commit of bundle and itk-algorithm

Aug 2 2016, 9:39 AM · Bugzilla, MITK
fangerau added a comment to T5134: (Diffusion Imaging) Tracking of fibres using diffusion MRI Images.

[SVN revision 26391]
COMP (#5134): fix, fiberTrackingView header info

Aug 2 2016, 9:39 AM · Bugzilla, MITK
fangerau added a comment to T5134: (Diffusion Imaging) Tracking of fibres using diffusion MRI Images.

[SVN revision 25607]
COMP (#5134): fix warnings; changed order of variables in headerfile concerning to init order in cppfile

Aug 2 2016, 9:39 AM · Bugzilla, MITK
fangerau added projects to T5046: Add optional usage of VTK 5.6 OpenGL GPU Volume Raycaster: MITK, Bugzilla.
Aug 2 2016, 9:39 AM · Bugzilla, MITK
fangerau added a comment to T5046: Add optional usage of VTK 5.6 OpenGL GPU Volume Raycaster.

[SVN revision 26655]
COMP (#5046): #ifdef for VTK 5.6 dependant code

Aug 2 2016, 9:39 AM · Bugzilla, MITK
fangerau added a comment to T5046: Add optional usage of VTK 5.6 OpenGL GPU Volume Raycaster.

[SVN revision 26656]
COMP (#5046): fixed warning for the #ifdef for VTK 5.6 dependant code

Aug 2 2016, 9:39 AM · Bugzilla, MITK
fangerau added a comment to T5046: Add optional usage of VTK 5.6 OpenGL GPU Volume Raycaster.

[SVN revision 26657]
FIX (#5046): nur test commit

Aug 2 2016, 9:39 AM · Bugzilla, MITK
fangerau added a comment to T5046: Add optional usage of VTK 5.6 OpenGL GPU Volume Raycaster.

[SVN revision 26654]
ENH (#5046): cpu/gpu mip, performance improvements, bugfixes, better lod

Aug 2 2016, 9:39 AM · Bugzilla, MITK
fangerau added a comment to T4255: Added a property to avoid binarization of images in 2D views.

bug no longer relevant, if the binary property exists, the heuristic is avoided.

Aug 2 2016, 9:38 AM · Bugzilla, MITK
fangerau added a comment to T3966: Issue with 3D view in Volume Visualization.

What means coronal, red/green/blue level, set into fore/background?
Please add screenshots

Aug 2 2016, 9:37 AM · Bugzilla, MITK
fangerau added a comment to T3895: [Dashboard] dartclient failed to pass mitkPropertyListTest on MacOSX.

The templated method mitk::PropertyList::GetPropertyValue<T> does not work,
cause it is based on GenericProperty<T>, which doesnt work correctly on Macs due to a compiler bug. Please see my comments on T3893 for details.

Aug 2 2016, 9:37 AM · Bugzilla, MITK
fangerau added a comment to T3895: [Dashboard] dartclient failed to pass mitkPropertyListTest on MacOSX.

disabling testing of the non-working templated method on macs

Aug 2 2016, 9:37 AM · Bugzilla, MITK
fangerau added a comment to F521: propertylisttestmac.patch.

disabling testing of the non-working templated method on macs

Aug 2 2016, 9:37 AM
fangerau added a comment to T3893: [Dashboard] dartclient failed to pass mitkBaseDataTest.

I assume the bug lies somewhere in the gcc-toolchain on the Mac.

Aug 2 2016, 9:37 AM · Bugzilla, MITK
fangerau added a comment to F520: macpatch.patch.

CleanFix for the MacTestBug

Aug 2 2016, 9:37 AM
fangerau added a comment to T3893: [Dashboard] dartclient failed to pass mitkBaseDataTest.

this patch fixes this bug and 3895.

Aug 2 2016, 9:37 AM · Bugzilla, MITK
fangerau added a comment to T3893: [Dashboard] dartclient failed to pass mitkBaseDataTest.

patch for making propertylist run on macs

Aug 2 2016, 9:37 AM · Bugzilla, MITK
fangerau added a comment to T3893: [Dashboard] dartclient failed to pass mitkBaseDataTest.

[SVN revision 26496]
COMP (#3893): added missing include

Aug 2 2016, 9:37 AM · Bugzilla, MITK
fangerau added a comment to F519: propertylistmac.patch.

patch for making propertylist run on macs

Aug 2 2016, 9:37 AM
fangerau added projects to T3577: mitk::StandardFileLocations::FindFile doesnt behave as documented: MITK, Bugzilla.
Aug 2 2016, 9:36 AM · Bugzilla, MITK
fangerau added a comment to T3577: mitk::StandardFileLocations::FindFile doesnt behave as documented.

[SVN revision 22132]
FIX (#3577): fixed FindFile searchorder

Aug 2 2016, 9:36 AM · Bugzilla, MITK
fangerau added projects to T3575: Implement Unit Test for mitk::StandardFileLocations: MITK, Bugzilla.
Aug 2 2016, 9:36 AM · Bugzilla, MITK
fangerau added projects to T3550: DisplayVectorInteractor: move private members to protected: MITK, Bugzilla.
Aug 2 2016, 9:36 AM · Bugzilla, MITK
fangerau added projects to T3501: Implement streaming image loading: MITK, Bugzilla.
Aug 2 2016, 9:36 AM · Bugzilla, MITK
fangerau added a comment to T3500: Implement a test for QmitkRenderWindow.

Above the bug number is wrong! Have a look at T3289...
We need a core modifcation for this Bug.

Aug 2 2016, 9:36 AM · Bugzilla, MITK
fangerau added projects to T3500: Implement a test for QmitkRenderWindow: MITK, Bugzilla.
Aug 2 2016, 9:36 AM · Bugzilla, MITK
fangerau added a comment to T3484: Modulsytem generiert keine ...Config.cmake-Dateien für MITK-externe Modules.

Ich denke folgendes Fehlverhalten ist auch ein Bug in den Moduldependencies:

Aug 2 2016, 9:36 AM · Bugzilla, MITK
fangerau added a comment to F498: bug.patch.

cmake-module-fehler

Aug 2 2016, 9:36 AM
fangerau added a comment to T3373: Fix org.mitk.gui.qt.regiongrowing.

sorry, we forgot to commit the fixed layout,
will be done when dashboard becomes green again

Aug 2 2016, 9:35 AM · Bugzilla, MITK
fangerau added a comment to T3355: Double threshold slider not drawn correctly on MacOS.

The volume visualization bundle uses the double slider from the qxt package,
which was introduced for the Mitk3M3 application.

Aug 2 2016, 9:35 AM · Bugzilla, MITK
fangerau added a comment to T3352: 2D rendering without color does not work as expected.

[SVN revision 21570]
FIX (#3352): iil4mitk support for lookuptables with alpha

Aug 2 2016, 9:35 AM · Bugzilla, MITK
fangerau added a comment to T3352: 2D rendering without color does not work as expected.

the imageMapper2D sets for rendering iil4mitk mode to COLOR_ALPHA with lookuptable.

Aug 2 2016, 9:35 AM · Bugzilla, MITK
fangerau added a comment to T3289: RenderingManager crashes.

hi xplanes,

Aug 2 2016, 9:35 AM · MITK (2012-06), Bugzilla
fangerau added a comment to T3289: RenderingManager crashes.

We think this one is not 1.0 relvant because we cannot reproduce this with our Qt based RenderWindows.

Aug 2 2016, 9:35 AM · MITK (2012-06), Bugzilla
fangerau added projects to T3254: Revise QT Event loop handling in MITK: MITK, Bugzilla.
Aug 2 2016, 9:34 AM · Bugzilla, MITK
fangerau added a comment to T3244: Volume rendering fails in MITK tutorial.

Step3 (the one using voluming rendering)

Aug 2 2016, 9:34 AM · Bugzilla, MITK
fangerau added a comment to T3241: Create some getting started documentation for the ExtApp.

i'll write the "manual" for the colourimageprocessing bundle,
its only a test bundle meant for application developers for creating combining RGBA images.

Aug 2 2016, 9:34 AM · Bugzilla, MITK
fangerau added a comment to T3216: Volume renderer mapper requires too much time for initializing.

In last commit, the speedup was achieved trough:

Aug 2 2016, 9:33 AM · Bugzilla, MITK
fangerau added a comment to T3216: Volume renderer mapper requires too much time for initializing.

[SVN revision 20971]
FIX (#3216): volume mapper speedup

Aug 2 2016, 9:33 AM · Bugzilla, MITK
fangerau added projects to T3216: Volume renderer mapper requires too much time for initializing: MITK, Bugzilla.
Aug 2 2016, 9:33 AM · Bugzilla, MITK
fangerau added a comment to T3198: Changed in order to have wireframe+surface and Added function Set Point Size.

the modifications for separate diffuse and ambient colors are already committed,

Aug 2 2016, 9:33 AM · Bugzilla, MITK
fangerau added projects to T3194: RGBA - Volumerendering support: MITK, Bugzilla.
Aug 2 2016, 9:33 AM · Bugzilla, MITK
fangerau added a comment to T3194: RGBA - Volumerendering support.

[SVN revision 21351]
COMP (#3194): typename

Aug 2 2016, 9:33 AM · Bugzilla, MITK
fangerau added a comment to T3194: RGBA - Volumerendering support.

[SVN revision 21349]
ENH (#3194): RGBA image processing

Aug 2 2016, 9:33 AM · Bugzilla, MITK
fangerau added a comment to T3194: RGBA - Volumerendering support.

[SVN revision 21350]
COMP (#3194): linux

Aug 2 2016, 9:33 AM · Bugzilla, MITK
fangerau added a comment to T3194: RGBA - Volumerendering support.

next commit will contain a bundle for converting ct images with a transferfunction to a RGBA image.

Aug 2 2016, 9:33 AM · Bugzilla, MITK
fangerau added a comment to T3180: Support separate colors for ambient and diffuse colour in surface rendering.

finally, in revision 21408 the material property has been removed.

Aug 2 2016, 9:33 AM · Bugzilla, MITK
fangerau added a comment to T3182: Thick-Slices in MITK.

[SVN revision 21519]
COMP (#3182): test method already defined

Aug 2 2016, 9:33 AM · Bugzilla, MITK