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May 17 2023

kislinsk closed T29000: [Otsu/Watershed Bug] Time points skipped while browsing segmentation Preview as Wontfix.

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May 17 2023, 3:01 PM 路 Missing Info, MITK
kislinsk closed T27487: Multi-slice screenshots as Wontfix.

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May 17 2023, 2:59 PM 路 Auto-closed, MITK
kislinsk closed T25496: Visualize RTDOSE correctly as Wontfix.

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May 17 2023, 2:59 PM 路 MITK
kislinsk closed T17656: ProgressBar for morphological operations as Wontfix.

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May 17 2023, 2:59 PM 路 Auto-closed, Request for Discussion, MITK, Bugzilla
kislinsk closed T27033: Clean up stale remote branches as Wontfix.

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May 17 2023, 2:59 PM 路 Auto-closed, MITK
kislinsk closed T25440: Image writer share priority with readers as Wontfix.

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May 17 2023, 2:59 PM 路 Auto-closed, MITK
kislinsk closed T25307: Clean up remove deprecated dicom properties as Wontfix.

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May 17 2023, 2:59 PM 路 Moved to git.dkfz.de, MITK
kislinsk closed T24540: DICOMReader module does not support Philips US 3D files on its "own" as Wontfix.

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May 17 2023, 2:59 PM 路 Moved to git.dkfz.de, Restricted Project, MITK
kislinsk closed T19711: Correct handling of RT-Properties in nodes and data as Wontfix.

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May 17 2023, 2:59 PM 路 Moved to git.dkfz.de, Bugzilla, MITK
kislinsk closed T19828: Improve dynamic-analysis module as Wontfix.

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May 17 2023, 2:59 PM 路 Auto-closed, Bugzilla, MITK
kislinsk closed T19711: Correct handling of RT-Properties in nodes and data, a subtask of T23746: MITK and DICOM (realization), as Wontfix.
May 17 2023, 2:59 PM 路 MITK
kislinsk closed T28424: Increase consistentcy of RT dose iso-color preset customization as Wontfix.

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May 17 2023, 2:59 PM 路 Auto-closed, MITK
kislinsk closed T28321: [Measurement] Control points can not be moved twice without moving the mouse away as Wontfix.

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May 17 2023, 2:59 PM 路 Auto-closed, MITK
kislinsk closed T28323: Workbench aborts if passed an invalid command line option as Wontfix.

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May 17 2023, 2:59 PM 路 Auto-closed, MITK
kislinsk closed T22322: Changing a renderer-specific property list of a data node does not modify the data node as Wontfix.

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May 17 2023, 2:59 PM 路 Moved to git.dkfz.de, MITK
kislinsk closed T23274: RenderWindowPartActivated is not called in several plugins as Wontfix.

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May 17 2023, 2:59 PM 路 Auto-closed, MICO (Demo_MICCAI_2017), MITK
kislinsk closed T23811: PatientViewPlugin ++, a subtask of T23754: DataStorage/Relationship clean up/refactoring, as Wontfix.
May 17 2023, 2:59 PM 路 MITK
kislinsk closed T23811: PatientViewPlugin ++ as Wontfix.

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May 17 2023, 2:59 PM 路 Moved to git.dkfz.de, Request for Discussion, MITK
kislinsk closed T26473: Optimize QmitkChartWidget interface as Wontfix.

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May 17 2023, 2:59 PM 路 Moved to git.dkfz.de, MITK
kislinsk closed T24770: WeakPointer: Exception on OnDeleteEvent when closing MITK workbench as Wontfix.

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May 17 2023, 2:59 PM 路 Auto-closed, MITK
kislinsk closed T25152: Cannot compare TemporoSpatialStringProperty as Wontfix.

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May 17 2023, 2:59 PM 路 Auto-closed, MITK
kislinsk closed T24729: GetPropertyKeys() in DataNode should also return propertyKeys of BaseData as Wontfix.

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May 17 2023, 2:59 PM 路 MITK (v2024.12)
kislinsk closed T26790: Workbench crashes when clearing chart data in ChartExample as Wontfix.

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May 17 2023, 2:59 PM 路 Auto-closed, Restricted Project, MITK
kislinsk closed T27340: [ModelFit] Request for Mac Workbench installer as Wontfix.

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May 17 2023, 2:59 PM 路 Auto-closed, Restricted Project, MITK
kislinsk closed T27568: US 2D image cannot be read: invalid tilt information, a subtask of T27554: Handling of 2D and 2D+t sonographic (US) images, as Wontfix.
May 17 2023, 2:59 PM 路 Restricted Project, MITK
kislinsk closed T27568: US 2D image cannot be read: invalid tilt information as Wontfix.

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May 17 2023, 2:59 PM 路 Moved to git.dkfz.de, Restricted Project, MITK
kislinsk closed T27697: Documentation feedback received from testers as Wontfix.

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May 17 2023, 2:59 PM 路 Auto-closed, MITK
kislinsk closed T28156: [Segmentation] Fix timestep / timepoint types as Wontfix.

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May 17 2023, 2:59 PM 路 Moved to git.dkfz.de, MITK (v2024.12)
kislinsk closed T27806: Meaning of 2D images in MITK as Wontfix.

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May 17 2023, 2:59 PM 路 Auto-closed, Request for Discussion, Restricted Project, MITK
kislinsk closed T27907: Extend "Checkliste Documentation" as Wontfix.

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May 17 2023, 2:59 PM 路 Auto-closed, MITK, Cleared
kislinsk closed T28150: [RT] Refactor RT Dose reader as Wontfix.

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May 17 2023, 2:59 PM 路 Moved to git.dkfz.de, MITK
kislinsk closed T28270: Segmentation masks not displayed in 3D render window as Wontfix.

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May 17 2023, 2:59 PM 路 Auto-closed, MITK
kislinsk closed T28252: [Chart] QmitkChartWidget has always vertical scrollbar active / does not resize content properly as Wontfix.

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May 17 2023, 2:59 PM 路 Auto-closed, MITK
kislinsk closed T28192: [Registration] Auto selection (and listening) in MatchPoint views as Wontfix.

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May 17 2023, 2:59 PM 路 Moved to git.dkfz.de, MITK
kislinsk closed T28281: Review C++ warnings configuration as Wontfix.

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May 17 2023, 2:59 PM 路 Auto-closed, Request for Discussion, MITK
kislinsk closed T28293: [MITK Workbench] Closing Workbench results in "Problem report" in macOS as Wontfix.

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May 17 2023, 2:59 PM 路 Auto-closed, MITK
kislinsk closed T28311: MitkFlowBench Naming Issue as Wontfix.

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May 17 2023, 2:59 PM 路 Auto-closed, MITK
kislinsk closed T28441: Volume Visualization fails for images with segmentations as Wontfix.

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May 17 2023, 2:59 PM 路 Auto-closed, MITK
kislinsk closed T28389: [Multilabelsegmentation] Locking all labels can only be reversed by unlock all as Wontfix.

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May 17 2023, 2:59 PM 路 Auto-closed, MITK
kislinsk closed T28466: [Image Cropper] Bounding shape cropper behavior not clear as Wontfix.

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May 17 2023, 2:59 PM 路 Auto-closed, MITK
kislinsk edited the content of Changelog.
May 17 2023, 2:22 PM 路 MITK

May 16 2023

kislinsk closed T29605: 2023 Week 20 (Mid May) as Resolved.
May 16 2023, 11:56 AM 路 MITK
kislinsk added a comment to T29605: 2023 Week 20 (Mid May).

Deleted branch from rMITK MITK: release/T29605-2023-Week-20.

May 16 2023, 11:55 AM 路 MITK
kislinsk edited the content of Changelog.
May 16 2023, 11:50 AM 路 MITK
kislinsk added a comment to T29605: 2023 Week 20 (Mid May).

Pushed new branch to rMITK MITK: release/T29605-2023-Week-20.

May 16 2023, 11:30 AM 路 MITK
kislinsk triaged T29605: 2023 Week 20 (Mid May) as Normal priority.
May 16 2023, 11:29 AM 路 MITK
kislinsk edited projects for T29591: [Segmentation] [Live Wire] Multiple reports of a crash due to image access out of bounds, added: MITK, Next Milestone; removed MITK (v2023.04).

Option 2 seems not to be enough, since I still can paint in other windows, even though it makes a little difference at least. Also, while free drawing a segment, you can leave a window and place a control point outside of the image which leads to the crashes reported.

May 16 2023, 8:18 AM 路 MITK (v2023.12), Checklist

May 15 2023

a178n added a comment to T29604: SAM as 2D Tool in MITK- iteration 2.

Pushed new branch to rMITK MITK: feature/T29604-sam-tool-2.

May 15 2023, 7:49 PM 路 MITK (v2024.06)
a178n triaged T29604: SAM as 2D Tool in MITK- iteration 2 as Normal priority.
May 15 2023, 7:27 PM 路 MITK (v2024.06)
a178n claimed T29540: SAM as 2D tool in MITK.
May 15 2023, 7:24 PM 路 MITK (v2024.06)

May 12 2023

kislinsk added a comment to T29603: Warn (as error) in Visual Studio for unreferenced parameters and variables to match our GCC/Clang settings.

There seems to be still issues with CMake 3.26.3 regarding include directories of Qt 5. Seems like we have to be more patient if that's an issue for our purpose.

May 12 2023, 12:55 PM 路 MITK
kislinsk added a comment to T29603: Warn (as error) in Visual Studio for unreferenced parameters and variables to match our GCC/Clang settings.

Pushed new branch to rMITK MITK: bugfix/T29603-MatchVisualStudioCompilerErrorsBetterToGCCAndClang.

May 12 2023, 12:54 PM 路 MITK
kislinsk added a comment to T29603: Warn (as error) in Visual Studio for unreferenced parameters and variables to match our GCC/Clang settings.

Additional checks necessary:

  • CMake version >= 3.24 (the feature was added before but didn't work until v3.24)
  • Visual Studio 2019 version >= 16.11 (according to MS 16.10 but CMake states 16.11 as minimum version)
May 12 2023, 12:39 PM 路 MITK
kislinsk added a revision to T29603: Warn (as error) in Visual Studio for unreferenced parameters and variables to match our GCC/Clang settings: Restricted Differential Revision.
May 12 2023, 11:36 AM 路 MITK
kislinsk triaged T29603: Warn (as error) in Visual Studio for unreferenced parameters and variables to match our GCC/Clang settings as Normal priority.
May 12 2023, 11:30 AM 路 MITK
kislinsk closed T28277: Empty Preferences page "Input Devices" as Resolved.
May 12 2023, 8:05 AM 路 MITK
kislinsk added a comment to T28277: Empty Preferences page "Input Devices".

Deleted branch from rMITK MITK: bugfix/T28277-DeleteRemnantsOfInputDevices.

May 12 2023, 8:05 AM 路 MITK
kislinsk added a comment to T28277: Empty Preferences page "Input Devices".

Pushed new branch to rMITK MITK: bugfix/T28277-DeleteRemnantsOfInputDevices.

May 12 2023, 7:52 AM 路 MITK
kislinsk added a revision to T28277: Empty Preferences page "Input Devices": Restricted Differential Revision.
May 12 2023, 7:41 AM 路 MITK
kislinsk claimed T28277: Empty Preferences page "Input Devices".

Input devices (WiiMote and Space Navigator 3-d mouse) are something not included anymore in MITK any major parts of it where removed a long time ago already. However, I found quite a few remnants still present which should be deleted like this preference page, the whole org.mitk.core.ext plugin with the device registry, or interaction constants related to the WiiMote or Space Navigator 3-d mouse.

May 12 2023, 7:27 AM 路 MITK
kislinsk closed T27693: Packaging Python does not work/is not implemented, a subtask of T27196: Rewrite packaging of MITK, as Invalid.
May 12 2023, 6:57 AM 路 Moved to git.dkfz.de, MITK, Cleared
kislinsk closed T27693: Packaging Python does not work/is not implemented as Invalid.
May 12 2023, 6:57 AM 路 MITK
kislinsk closed T27995: Upgrade CDash to 3.0 as Wontfix.
May 12 2023, 6:54 AM 路 CI, MITK

May 11 2023

kislinsk closed T29599: Disable mitkVigraRandomForestTest on macOS as Resolved.
May 11 2023, 11:42 AM 路 MITK
kislinsk added a comment to T29599: Disable mitkVigraRandomForestTest on macOS.

Deleted branch from rMITK MITK: bugfix/T29599-DisableVigraRandomForestTestOnMacOS.

May 11 2023, 11:42 AM 路 MITK
kislinsk added a comment to T29599: Disable mitkVigraRandomForestTest on macOS.

Pushed new branch to rMITK MITK: bugfix/T29599-DisableVigraRandomForestTestOnMacOS.

May 11 2023, 11:39 AM 路 MITK
kislinsk triaged T29599: Disable mitkVigraRandomForestTest on macOS as Normal priority.
May 11 2023, 11:34 AM 路 MITK
a178n added a comment to T29497: Full support for all subtasks.

Deleted branch from rMITK MITK: feature/T29497-totalseg-subtasks-support.

May 11 2023, 9:48 AM 路 MITK

May 9 2023

kislinsk closed T29336: Changing theme in Preferences has no effect. as Invalid.

Tried on different macOS versions. Couldn't reproduce.

May 9 2023, 1:51 PM 路 MITK, Checklist

May 8 2023

a178n added a comment to T29379: MONAI Label REST Response JSON issues, allegedly.

A meeting occured with MonaiLabel devs on 08.05.2023 (6-7pm) to discuss the above-mentioned concerns.

May 8 2023, 9:27 PM 路 Moved to git.dkfz.de, MITK
a178n added a comment to T29375: Cursor offset in 2D tools with Qt 5.15 on macOS.

Hi @floca ,
This seems to be fixed already on the current develop. Didn't have to patch D825!
No more cursor offset observed. Tested using 3D and 4D images.
Tested with D825 patched, as well.

May 8 2023, 2:11 PM 路 MITK (v2023.04)

May 7 2023

floca added a comment to T29375: Cursor offset in 2D tools with Qt 5.15 on macOS.

@a178n could you check if this task is solved with T29572?

May 7 2023, 1:19 PM 路 MITK (v2023.04)
floca added a subtask for T29375: Cursor offset in 2D tools with Qt 5.15 on macOS: T29572: [SEG] Tool interaction does not work on multi montor setup with different dpi.
May 7 2023, 1:18 PM 路 MITK (v2023.04)

May 5 2023

a178n triaged T29569: [Checklist] Update TotalSegmentator & nnUNet checklist as High priority.
May 5 2023, 2:54 PM 路 MITK (v2023.12), Checklist

May 4 2023

kislinsk edited the content of Changelog.
May 4 2023, 4:55 PM 路 MITK
kislinsk closed T29565: 2023 Week 18 (Very Early May) as Resolved.
May 4 2023, 4:54 PM 路 MITK
kislinsk added a comment to T29565: 2023 Week 18 (Very Early May).

Deleted branch from rMITK MITK: release/T29565-2023-Week-18.

May 4 2023, 4:53 PM 路 MITK
kislinsk added a comment to T29565: 2023 Week 18 (Very Early May).

Pushed new branch to rMITK MITK: release/T29565-2023-Week-18.

May 4 2023, 3:02 PM 路 MITK
kislinsk triaged T29565: 2023 Week 18 (Very Early May) as Normal priority.
May 4 2023, 3:00 PM 路 MITK
floca added a subtask for T29562: [GrowCut] "Undo" only changes slices with seed images: Unknown Object (Maniphest Task).
May 4 2023, 2:54 PM 路 Moved to git.dkfz.de, Request for Discussion, MITK
floca added a project to T29562: [GrowCut] "Undo" only changes slices with seed images: Request for Discussion.

grow cut (as all preview tools) does not generate any undo point right now. What you witness is the undo of your seed painting up front.

May 4 2023, 2:49 PM 路 Moved to git.dkfz.de, Request for Discussion, MITK
s434n added a subtask for T29309: [GrowCut] Further remarks regarding GrowCut: T29562: [GrowCut] "Undo" only changes slices with seed images.
May 4 2023, 1:46 PM 路 MITK
s434n added a parent task for T29562: [GrowCut] "Undo" only changes slices with seed images: T29309: [GrowCut] Further remarks regarding GrowCut.
May 4 2023, 1:46 PM 路 Moved to git.dkfz.de, Request for Discussion, MITK
s434n triaged T29562: [GrowCut] "Undo" only changes slices with seed images as Normal priority.
May 4 2023, 1:46 PM 路 Moved to git.dkfz.de, Request for Discussion, MITK

May 3 2023

a178n added a comment to T29067: Introduce option to save the segmentation in the nnUNet tool GUI itself..

It was decided in the MITK meeting that this feature request won't be taken forward.

May 3 2023, 4:43 PM 路 MITK
a178n closed T29067: Introduce option to save the segmentation in the nnUNet tool GUI itself. as Wontfix.
May 3 2023, 4:42 PM 路 MITK
floca added a comment to T29452: Setting arbitrary label names to a LabelSetImage can be more straightforward.

I am not sure I would put it a member function. This can be done without the need of accessing any internals.

May 3 2023, 3:55 PM 路 Moved to git.dkfz.de, MITK, Request for Discussion
floca edited projects for T28275: [Segmentation] AdaptiveRegionGrowingTool must be refactored / 4D Segmentation returns error message when point is not on the correct timestep, added: MITK, Next Milestone, Request for Discussion; removed MITK (v2023.04).

We should discuss if it is still worth it to get it back online after all this time and with the new tools.

May 3 2023, 3:51 PM 路 Moved to git.dkfz.de, MITK (v2024.12)
floca edited projects for T28499: Refactor/rewrite RegionGrowing3D tool, added: MITK, Next Milestone; removed MITK (v2023.04).

We should discuss if we realy try to get region growing back online with all the other tools ...

May 3 2023, 3:48 PM 路 Moved to git.dkfz.de, MITK (v2024.12)
a178n closed T28691: AutoSegmentationWithPreviewTool tool manager won't support multithreading as Invalid.
May 3 2023, 12:06 PM 路 MITK
kislinsk closed T29451: [SEG] Response labels all not displayed on Workbench, a subtask of T29295: MONAI Label App as auto-segmentation tool in MITK, as Resolved.
May 3 2023, 11:40 AM 路 Moved to git.dkfz.de, MITK (v2024.12)
s434n placed T29504: Initialize QmitkSlicesInterpolator with render windows instead of slice navigation controllers up for grabs.

This task should be revised / kept in mind when reworking the interpolation in general

May 3 2023, 11:15 AM 路 Moved to git.dkfz.de, MITK (v2024.12)
s434n edited projects for T29295: MONAI Label App as auto-segmentation tool in MITK, added: Next Milestone, MITK; removed MITK (v2023.04).
May 3 2023, 11:14 AM 路 Moved to git.dkfz.de, MITK (v2024.12)
s434n placed T28491: [Segmentation] Slice interpolation 'confirm for all slices' sometimes crahes up for grabs.

This task should be revised / checked if the problem still exists when the interpolation controller has been reworked.

May 3 2023, 11:12 AM 路 MITK (v2023.12)
a178n closed T29497: Full support for all subtasks as Resolved.
May 3 2023, 11:09 AM 路 MITK
s434n placed T29105: [3D Surface Interpolation] 3D+t Interpolation Preview Crashes When Going Through Different Time Steps up for grabs.
May 3 2023, 11:07 AM 路 Breaking Change, MITK (v2024.06), Checklist

May 2 2023

kislinsk triaged T29553: Include label instances in label set presets as High priority.
May 2 2023, 10:27 AM 路 Moved to git.dkfz.de, MITK (v2024.12)

Apr 28 2023

goetzm added a comment to T25826: Update Radiomics GUI.

Pushed new branch to rMITK MITK: T25826-RadiomicsUpdate-V4.

Apr 28 2023, 8:46 AM 路 Auto-closed, MITK

Apr 27 2023

kislinsk added a comment to T29481: Fix and unify include guards.

Deleted branch from rMITK MITK: bugfix/T29481-FixAndUnifyIncludeGuards.

Apr 27 2023, 1:40 PM 路 MITK
kislinsk added a comment to T29481: Fix and unify include guards.

Pushed new branch to rMITK MITK: bugfix/T29481-FixAndUnifyIncludeGuards.

Apr 27 2023, 1:39 PM 路 MITK
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